Personal tools

UBERON:0002296: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 4: Line 4:
|namespace=
|namespace=
|def="The mesentery that originates from the dorsal side of the peritoneal cavity[ZFA]." [Wikipedia:Dorsal_mesentery, Wikipedia:Mesentery#Development, ZFIN:curator]
|def="The mesentery that originates from the dorsal side of the peritoneal cavity[ZFA]." [Wikipedia:Dorsal_mesentery, Wikipedia:Mesentery#Development, ZFIN:curator]
|xref=EHDAA:3019;;EHDAA:3033;;EHDAA:3921;;EHDAA:3934;;EHDAA:3957;;EHDAA:3971;;EHDAA2:0004560;;FMA:79795;;http://upload.wikimedia.org/wikipedia/commons/thumb/8/85/Gray985.png/200px-Gray985.png;;SCTID:308823000;;TAO:0005130;;ZFA:0005130
|xref=EHDAA2:0004560;;EHDAA:3019;;EHDAA:3033;;EHDAA:3921;;EHDAA:3934;;EHDAA:3957;;EHDAA:3971;;FMA:79795;;http://upload.wikimedia.org/wikipedia/commons/8/85/Gray985.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/8/85/Gray985.png/200px-Gray985.png;;SCTID:308823000;;TAO:0005130;;ZFA:0005130
|is_a=UBERON:0002050;;UBERON:0004120
|is_a=UBERON:0002050;;UBERON:0004120
|synonym="dorsal mesogastrium" RELATED [Wikipedia:Dorsal_mesentery]
|synonym="dorsal mesogastrium" RELATED [Wikipedia:Dorsal_mesentery];;"mesenterium dorsale commune" RELATED LATIN [Wikipedia:Dorsal_mesentery]
|comment=
|comment=
|alt_id=UBERON:FMA_79795-ZFA_0005130
|alt_id=UBERON:FMA_79795-ZFA_0005130
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=uberon_slim;;vertebrate_core
|subset=uberon_slim;;vertebrate_core
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0009664
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The mesentery that originates from the dorsal side of the peritoneal cavity.[TAO]" xsd:string
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:01, 26 June 2012

Name:dorsal mesentery
Definition:"The mesentery that originates from the dorsal side of the peritoneal cavity[ZFA]." [Wikipedia:Dorsal_mesentery, Wikipedia:Mesentery#Development, ZFIN:curator]
Xrefs:
links:

EHDAA2:0004560
EHDAA:3019
EHDAA:3033
EHDAA:3921
EHDAA:3934
EHDAA:3957
EHDAA:3971
FMA:79795
[ Gray985.png Gray985.png]
[ 200px-Gray985.png 200px-Gray985.png]
SCTID:308823000
TAO:0005130

ZFA:0005130
Synonyms: "dorsal mesogastrium" RELATED [Wikipedia:Dorsal_mesentery]
"mesenterium dorsale commune" RELATED LATIN [Wikipedia:Dorsal_mesentery]
Alt_id: UBERON:FMA_79795-ZFA_0005130
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002050(embryonic structure),UBERON:0004120(mesoderm-derived structure)



Children

develops from:UBERON:0002095 (mesentery)
part of:UBERON:0005602 (dorsal mesogastrium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002296 (dorsal mesentery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.98e-131FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_43ad1d6e1cbbdbf46ee88828f079e354p8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr10:98014943..98014960, -
8.98e-131FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@uc003pyn.1
8.98e-131FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_43ad1d6e1cbbdbf46ee88828f079e354p12@JDP2
8.98e-131FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859638..56859643, -
8.98e-131FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_43ad1d6e1cbbdbf46ee88828f079e354p19@RAPGEF5
8.98e-131FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_43ad1d6e1cbbdbf46ee88828f079e354p10@VPS13A
8.98e-131FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859693..56859701, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_43ad1d6e1cbbdbf46ee88828f079e354p5@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_43ad1d6e1cbbdbf46ee88828f079e354p11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@uc001ftm.1
8.98e-131FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_43ad1d6e1cbbdbf46ee88828f079e354p21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_43ad1d6e1cbbdbf46ee88828f079e354p18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr17:78171885..78171900, +
8.98e-131FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_43ad1d6e1cbbdbf46ee88828f079e354p7@CD5L
8.98e-131FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859584..56859589, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_43ad1d6e1cbbdbf46ee88828f079e354p4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859693..56859701, -
8.98e-131FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_43ad1d6e1cbbdbf46ee88828f079e354p60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr11:925449..925458,+#_43ad1d6e1cbbdbf46ee88828f079e354p17@AP2A2
8.98e-131FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr19:32401253..32401271, -
8.98e-131FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000524012
8.98e-131FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859584..56859589, -
8.98e-131FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_43ad1d6e1cbbdbf46ee88828f079e354p19@RAPGEF5
8.98e-131FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_43ad1d6e1cbbdbf46ee88828f079e354p3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000517384
8.98e-131FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_43ad1d6e1cbbdbf46ee88828f079e354p7@GDPD2
8.98e-131FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_43ad1d6e1cbbdbf46ee88828f079e354p5@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr9:124516729..124516752, +
8.98e-131FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr17:78171885..78171900, +
8.98e-131FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@uc003pyn.1
8.98e-131FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_43ad1d6e1cbbdbf46ee88828f079e354p10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000501239
8.98e-131FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_43ad1d6e1cbbdbf46ee88828f079e354p11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@uc001ftm.1
8.98e-131FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859608..56859619, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_43ad1d6e1cbbdbf46ee88828f079e354p8@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_43ad1d6e1cbbdbf46ee88828f079e354p21@PTAFR
8.98e-131FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_43ad1d6e1cbbdbf46ee88828f079e354p7@CD5L
8.98e-131FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_43ad1d6e1cbbdbf46ee88828f079e354p4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_43ad1d6e1cbbdbf46ee88828f079e354p60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859608..56859619, -
8.98e-131FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr10:98014943..98014960, -
8.98e-131FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_43ad1d6e1cbbdbf46ee88828f079e354p12@JDP2
8.98e-131FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_43ad1d6e1cbbdbf46ee88828f079e354p18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859638..56859643, -
8.98e-131FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr19:32401253..32401271, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_43ad1d6e1cbbdbf46ee88828f079e354p7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_43ad1d6e1cbbdbf46ee88828f079e354p3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr11:925449..925458,+#_43ad1d6e1cbbdbf46ee88828f079e354p17@AP2A2
6.24e-88FFCP PHASE2:Hg19::chr1:21011608..21011618,-#_4accb5eff2aeb588a76b8fbecfcccd15p15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr19:32401274..32401289,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE1:Hg19::chr22:36718586..36718593,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE2:Hg19::chr11:56859722..56859732,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr11:56859722..56859732, -
6.24e-88FFCP PHASE1:Hg19::chr4:146461014..146461025,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE1:Hg19::chr3:130267501..130267516,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr3:130267501..130267516, +
6.24e-88FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr11:56859722..56859732,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr11:56859722..56859732, -
6.24e-88FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_4accb5eff2aeb588a76b8fbecfcccd15p15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr22:36718586..36718593,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE1:Hg19::chr19:32401274..32401289,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE2:Hg19::chr9:127267367..127267383,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE2:Hg19::chr4:146461014..146461025,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr3:130267501..130267516,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr3:130267501..130267516, +
9.74e-88FFCP PHASE2:Hg19::chr16:70680361..70680370,+#_4f9744a17e31635c15ed1fabc192b705p6@IL34
9.74e-88FFCP PHASE1:Hg19::chr12:72481040..72481051,+#_4f9744a17e31635c15ed1fabc192b705p19@TRHDE
9.74e-88FFCP PHASE1:Hg19::chr14:24168655..24168686,+#_4f9744a17e31635c15ed1fabc192b705p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE1:Hg19::chr2:1508349..1508357,+#_4f9744a17e31635c15ed1fabc192b705p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE2:Hg19::chr12:72481040..72481051,+#_4f9744a17e31635c15ed1fabc192b705p19@TRHDE
9.74e-88FFCP PHASE2:Hg19::chr2:128321491..128321509,+#_4f9744a17e31635c15ed1fabc192b705p@chr2:128321491..128321509, +
9.74e-88FFCP PHASE1:Hg19::chr16:70680361..70680370,+#_4f9744a17e31635c15ed1fabc192b705p6@IL34
9.74e-88FFCP PHASE2:Hg19::chr14:24168655..24168686,+#_4f9744a17e31635c15ed1fabc192b705p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE2:Hg19::chr7:151070957..151070988,+#_4f9744a17e31635c15ed1fabc192b705p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE2:Hg19::chr2:1508349..1508357,+#_4f9744a17e31635c15ed1fabc192b705p@chr2:1508349..1508357, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "The mesentery that originates from the dorsal side of the peritoneal cavity.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0002296&oldid=1835722"