UBERON:0002050
From FANTOM5_SSTAR
Name: | embryonic structure | ||
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Namespace: | FANTOM | ||
Definition: | "Anatomical structure that is part of an embryo." [BTO:0000174, ZFIN:curator] | ||
Xrefs: |
| ||
Synonyms: |
"developing embryonic structure" EXACT [FBbt:00004208] "developing structure" RELATED [] "embryonale Struktur" RELATED [BTO:0000174] "embryonic anatomical structure" EXACT [RETIRED_EHDAA2:0003169] | ||
Comments: | Note in FMA embryo is_a embryonic structure | ||
Alt_id: | UBERON:FMA_69067-XAO_0003042-ZFA_0001105 | ||
Subset: |
inconsistent_with_fma vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000061(anatomical structure),UBERON:0005423(developing anatomical structure) |
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part_of: | UBERON:0000922(embryo) |
Children
is a: | UBERON:0000087 (inner cell mass),UBERON:0000088 (trophoblast),UBERON:0000091 (bilaminar disc),UBERON:0000163 (embryonic cloaca),UBERON:0000358 (blastocyst),UBERON:0000930 (stomodeum),UBERON:0000931 (proctodeum),UBERON:0002061 (truncus arteriosus),UBERON:0002296 (dorsal mesentery),UBERON:0002532 (epiblast (generic)),UBERON:0002539 (pharyngeal arch),UBERON:0003285 (limb of embryo),UBERON:0003890 (Mullerian duct),UBERON:0004348 (optic eminence),UBERON:0004357 (paired limb/fin bud),UBERON:0004363 (pharyngeal arch artery),UBERON:0005291 (embryonic tissue),UBERON:0005432 (aortic sac),UBERON:0005498 (primitive heart tube),UBERON:0005602 (dorsal mesogastrium),UBERON:0005795 (embryonic uterus),UBERON:0006222 (future diencephalon),UBERON:0006232 (facio-acoustic VII-VIII preganglion complex),UBERON:0006256 (knee joint primordium),UBERON:0007026 (primitive gut),UBERON:0008814 (pharyngeal arch system),UBERON:0008816 (embryonic head),UBERON:0009117 (indifferent gonad),UBERON:0009142 (entire embryonic mesenchyme),UBERON:0009196 (indifferent external genitalia),UBERON:0010130 (autopod plate),UBERON:0010375 (pancreas dorsal primordium),UBERON:0011628 (early premaxilla),UBERON:0011997 (coelom),UBERON:0012292 (embryonic cloacal fold),UBERON:0013241 (embryonic urethral groove),UBERON:0014371 (future telencephalon) |
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disjoint from: | UBERON:0000478 (extraembryonic structure) |
part of: | UBERON:0005291 (embryonic tissue) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10055-101H1 (uterus, fetal, donor1)
- 10233-103I8 (chicken leg buds, day03 (HH20))
- 10637-108I7 (neuroectodermal tumor cell line:FU-RPNT-1)
- 10663-109C6 (neuroectodermal tumor cell line:FU-RPNT-2)
- 10697-109G4 (peripheral neuroectodermal tumor cell line:KU-SN)
- 10774-110F9 (neuroectodermal tumor cell line:TASK1)
- 11534-120A4
- 11614-122A3
- 11695-123A3
- 11947-126B3 (Mesoderm, embryo E8.5)
... further results Mouse (Mus musculus)
- 10055-101H1 (uterus, fetal, donor1)
- 10233-103I8 (chicken leg buds, day03 (HH20))
- 10637-108I7 (neuroectodermal tumor cell line:FU-RPNT-1)
- 10663-109C6 (neuroectodermal tumor cell line:FU-RPNT-2)
- 10697-109G4 (peripheral neuroectodermal tumor cell line:KU-SN)
- 10774-110F9 (neuroectodermal tumor cell line:TASK1)
- 11534-120A4
- 11614-122A3
- 11695-123A3
- 11947-126B3 (Mesoderm, embryo E8.5)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002050 (embryonic structure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
4.53e-31 | FFCP PHASE1:Hg19::chr20:23618584..23618603,-#_d858c19b45243c63c7c2091a84fd2fbf | p1@CST3 |
4.53e-31 | FFCP PHASE2:Hg19::chr20:23618584..23618603,-#_d858c19b45243c63c7c2091a84fd2fbf | p1@CST3 |
1.85e-30 | FFCP PHASE2:Hg19::chr13:77460532..77460548,-#_8bb6b038a6d5582678b22b237bcbca3c | p1@KCTD12 |
1.85e-30 | FFCP PHASE1:Hg19::chr13:77460532..77460548,-#_8bb6b038a6d5582678b22b237bcbca3c | p1@KCTD12 |
1.06e-29 | FFCP PHASE2:Hg19::chr13:45010939..45011033,-#_99c359f96069acd87d8d854aedeb6118 | p1@TSC22D1 |
1.06e-29 | FFCP PHASE1:Hg19::chr13:45010939..45011033,-#_99c359f96069acd87d8d854aedeb6118 | p1@TSC22D1 |
1.91e-28 | FFCP PHASE2:Hg19::chr2:230135937..230136016,-#_d4b4c1819be61b0d66a14e0f9a3ba041 | p1@PID1 |
1.91e-28 | FFCP PHASE1:Hg19::chr2:230135937..230136016,-#_d4b4c1819be61b0d66a14e0f9a3ba041 | p1@PID1 |
3.23e-27 | FFCP PHASE2:Hg19::chr7:111846435..111846471,-#_1a073e7d1d6d674ea81802aef162f340 | p1@DOCK4 |
3.23e-27 | FFCP PHASE1:Hg19::chr7:111846435..111846471,-#_1a073e7d1d6d674ea81802aef162f340 | p1@DOCK4 |
1.12e-26 | FFCP PHASE2:Hg19::chr11:1330834..1330875,-#_109507a1b40d25952afe5bc9aab2a702 | p1@TOLLIP |
1.12e-26 | FFCP PHASE1:Hg19::chr11:1330834..1330875,-#_109507a1b40d25952afe5bc9aab2a702 | p1@TOLLIP |
4.28e-26 | FFCP PHASE2:Hg19::chr13:77460594..77460613,-#_7ad817e9ae050123e39be4e5fcdd0a6a | p3@KCTD12 |
4.28e-26 | FFCP PHASE1:Hg19::chr13:77460594..77460613,-#_7ad817e9ae050123e39be4e5fcdd0a6a | p3@KCTD12 |
7.76e-25 | FFCP PHASE2:Hg19::chr12:112204714..112204781,+#_0bb735c5be4d68b7623773b5fd520cf2 | p1@ALDH2 |
7.76e-25 | FFCP PHASE1:Hg19::chr12:112204714..112204781,+#_0bb735c5be4d68b7623773b5fd520cf2 | p1@ALDH2 |
1.05e-24 | FFCP PHASE1:Hg19::chr4:85887789..85887862,-#_c9a5611eb61c5be0d5febe3f2759aefd | p1@WDFY3 |
1.05e-24 | FFCP PHASE2:Hg19::chr4:85887789..85887862,-#_c9a5611eb61c5be0d5febe3f2759aefd | p1@WDFY3 |
2.14e-24 | FFCP PHASE1:Hg19::chr8:30670289..30670354,-#_292edeba934edd2e5dce78065c2b1935 | p1@PPP2CB |
2.14e-24 | FFCP PHASE2:Hg19::chr8:30670289..30670354,-#_292edeba934edd2e5dce78065c2b1935 | p1@PPP2CB |
5.99e-24 | FFCP PHASE1:Hg19::chr13:77460635..77460654,-#_930f48e78896754c3fb76bb8933c0a4c | p2@KCTD12 |
5.99e-24 | FFCP PHASE2:Hg19::chr13:77460635..77460654,-#_930f48e78896754c3fb76bb8933c0a4c | p2@KCTD12 |
7.3e-24 | FFCP PHASE2:Hg19::chr16:4852616..4852679,-#_930a5d04ee33d5418d9376e995c0ced2 | p1@ROGDI |
7.3e-24 | FFCP PHASE1:Hg19::chr16:4852616..4852679,-#_930a5d04ee33d5418d9376e995c0ced2 | p1@ROGDI |
2.42e-23 | FFCP PHASE1:Hg19::chr16:2563989..2564006,+#_29f66dac6362667956c0d3c837baf3ef | p2@ATP6V0C |
2.42e-23 | FFCP PHASE2:Hg19::chr16:2563989..2564006,+#_29f66dac6362667956c0d3c837baf3ef | p2@ATP6V0C |
4.38e-23 | FFCP PHASE1:Hg19::chr19:40871734..40871809,+#_e3838a447824581b351e909e35c4121b | p1@PLD3 |
4.38e-23 | FFCP PHASE2:Hg19::chr19:40871734..40871809,+#_e3838a447824581b351e909e35c4121b | p1@PLD3 |
5.01e-23 | FFCP PHASE1:Hg19::chr4:159094160..159094185,-#_b58d5e76212f3b12a0f9d083c143b781 | p2@FAM198B |
5.01e-23 | FFCP PHASE2:Hg19::chr4:159094160..159094185,-#_b58d5e76212f3b12a0f9d083c143b781 | p2@FAM198B |
5.59e-23 | FFCP PHASE2:Hg19::chr1:183774240..183774270,+#_3b838a685d6e5f9c919a7110b80d0a01 | p1@RGL1 |
5.59e-23 | FFCP PHASE1:Hg19::chr1:183774240..183774270,+#_3b838a685d6e5f9c919a7110b80d0a01 | p1@RGL1 |
6.77e-23 | FFCP PHASE2:Hg19::chr20:35974484..35974529,+#_12fc5b6b59aeb272c931f4c6dd5ac0cc | p2@SRC |
6.77e-23 | FFCP PHASE1:Hg19::chr20:35974484..35974529,+#_12fc5b6b59aeb272c931f4c6dd5ac0cc | p2@SRC |
1.19e-22 | FFCP PHASE2:Hg19::chr11:65082349..65082378,+#_6364068effcd6f95e18930efdba39f89 | p1@CDC42EP2 |
1.19e-22 | FFCP PHASE1:Hg19::chr11:65082349..65082378,+#_6364068effcd6f95e18930efdba39f89 | p1@CDC42EP2 |
1.43e-22 | FFCP PHASE2:Hg19::chr19:6720653..6720670,-#_e164befb856b7417d28c15c54b4e7251 | p1@C3 |
1.43e-22 | FFCP PHASE1:Hg19::chr19:6720653..6720670,-#_e164befb856b7417d28c15c54b4e7251 | p1@C3 |
1.78e-22 | FFCP PHASE1:Hg19::chr15:90456156..90456198,-#_46a26dd9408e86a05d17aa7f1f283d19 | p1@C15orf38 |
1.78e-22 | FFCP PHASE2:Hg19::chr15:90456156..90456198,-#_46a26dd9408e86a05d17aa7f1f283d19 | p1@C15orf38 |
1.87e-22 | FFCP PHASE2:Hg19::chr4:24914581..24914691,-#_decc0f032aab9f04551be13e2249e20d | p1@CCDC149 |
1.87e-22 | FFCP PHASE1:Hg19::chr4:24914581..24914691,-#_decc0f032aab9f04551be13e2249e20d | p1@CCDC149 |
2.63e-22 | FFCP PHASE2:Hg19::chr18:59561635..59561651,-#_1696a099ff45195e8031870cf386dd24 | p@chr18:59561635..59561651, - |
2.63e-22 | FFCP PHASE1:Hg19::chr18:59561635..59561651,-#_1696a099ff45195e8031870cf386dd24 | p@chr18:59561635..59561651, - |
5.07e-22 | FFCP PHASE1:Hg19::chr19:44100155..44100211,-#_b1bcb234e86e33aaf9fa51bf3e777133 | p1@IRGQ |
5.07e-22 | FFCP PHASE2:Hg19::chr19:44100155..44100211,-#_b1bcb234e86e33aaf9fa51bf3e777133 | p1@IRGQ |
5.66e-22 | FFCP PHASE2:Hg19::chr17:1466030..1466129,-#_f238cf566bf4423e3b89fb1e59514b55 | p1@PITPNA |
5.66e-22 | FFCP PHASE1:Hg19::chr17:1466030..1466129,-#_f238cf566bf4423e3b89fb1e59514b55 | p1@PITPNA |
7.24e-22 | FFCP PHASE1:Hg19::chr7:2671611..2671658,+#_a8b4fcf1fa2522dd0c3f149470891618 | p2@TTYH3 |
7.24e-22 | FFCP PHASE2:Hg19::chr7:2671611..2671658,+#_a8b4fcf1fa2522dd0c3f149470891618 | p2@TTYH3 |
1.04e-21 | FFCP PHASE2:Hg19::chr9:14314566..14314618,-#_02f3ac34340382422b6683474f6ec06f | p1@NFIB |
1.04e-21 | FFCP PHASE1:Hg19::chr9:14314566..14314618,-#_02f3ac34340382422b6683474f6ec06f | p1@NFIB |
1.42e-21 | FFCP PHASE1:Hg19::chr18:59561658..59561685,-#_899d000dfe981a654a9499e182c109d0 | p@chr18:59561658..59561685, - |
1.42e-21 | FFCP PHASE2:Hg19::chr18:59561658..59561685,-#_899d000dfe981a654a9499e182c109d0 | p@chr18:59561658..59561685, - |
1.76e-21 | FFCP PHASE1:Hg19::chr17:7492684..7492778,-#_843890bc9f1db414479ab378da9d8003 | p2@SOX15 |
1.76e-21 | FFCP PHASE2:Hg19::chr17:7492684..7492778,-#_843890bc9f1db414479ab378da9d8003 | p2@SOX15 |
1.92e-21 | FFCP PHASE2:Hg19::chr2:127864839..127864888,-#_6445d435b028a21027f48199d6c680ad | p2@BIN1 |
1.92e-21 | FFCP PHASE1:Hg19::chr2:127864839..127864888,-#_6445d435b028a21027f48199d6c680ad | p2@BIN1 |
3.14e-21 | FFCP PHASE1:Hg19::chr9:14314131..14314147,-#_ee3d4b449e4108d2625de95b82b11e77 | p2@NFIB |
3.14e-21 | FFCP PHASE2:Hg19::chr9:14314131..14314147,-#_ee3d4b449e4108d2625de95b82b11e77 | p2@NFIB |
3.31e-21 | FFCP PHASE2:Hg19::chr1:10270620..10270637,+#_c5cccb1f84792586dc292679accf211d | p1@KIF1B |
3.31e-21 | FFCP PHASE1:Hg19::chr1:10270620..10270637,+#_c5cccb1f84792586dc292679accf211d | p1@KIF1B |
7.13e-21 | FFCP PHASE2:Hg19::chr10:30025922..30025958,-#_256456901ada28627fe5441ea50d983b | p3@SVIL |
7.13e-21 | FFCP PHASE1:Hg19::chr10:30025922..30025958,-#_256456901ada28627fe5441ea50d983b | p3@SVIL |
7.14e-21 | FFCP PHASE1:Hg19::chr17:73851380..73851427,-#_ef93584d93eb88383fd74d0673b3a4af | p1@WBP2 |
7.14e-21 | FFCP PHASE2:Hg19::chr17:73851380..73851427,-#_ef93584d93eb88383fd74d0673b3a4af | p1@WBP2 |
1.03e-20 | FFCP PHASE2:Hg19::chr2:127864608..127864688,-#_0b4ce5200381a358c53c99f041798d7d | p1@BIN1 |
1.03e-20 | FFCP PHASE1:Hg19::chr2:127864608..127864688,-#_0b4ce5200381a358c53c99f041798d7d | p1@BIN1 |
1.29e-20 | FFCP PHASE1:Hg19::chr9:34989685..34989748,+#_9d4c95b0aa8ff87d3c5a6026c714f01a | p1@DNAJB5 |
1.29e-20 | FFCP PHASE2:Hg19::chr9:34989685..34989748,+#_9d4c95b0aa8ff87d3c5a6026c714f01a | p1@DNAJB5 |
2.36e-20 | FFCP PHASE2:Hg19::chr22:31003154..31003188,+#_81852d5f8744dd0a7209ea10d699ad09 | p1@TCN2 |
2.36e-20 | FFCP PHASE1:Hg19::chr22:31003154..31003188,+#_81852d5f8744dd0a7209ea10d699ad09 | p1@TCN2 |
2.87e-20 | FFCP PHASE2:Hg19::chr12:110719036..110719113,+#_46cc6473c14383b161763e6385198d4d | p1@ATP2A2 |
2.87e-20 | FFCP PHASE1:Hg19::chr12:110719036..110719113,+#_46cc6473c14383b161763e6385198d4d | p1@ATP2A2 |
3.22e-20 | FFCP PHASE1:Hg19::chr19:14228541..14228582,-#_d17e9342afe94efa240a040358a149c9 | p1@PRKACA |
3.22e-20 | FFCP PHASE2:Hg19::chr19:14228541..14228582,-#_d17e9342afe94efa240a040358a149c9 | p1@PRKACA |
3.72e-20 | FFCP PHASE2:Hg19::chr10:118764649..118764683,-#_0f5396f48e60d08bd533d1ccefe351df | p2@KIAA1598 |
3.72e-20 | FFCP PHASE1:Hg19::chr10:118764649..118764683,-#_0f5396f48e60d08bd533d1ccefe351df | p2@KIAA1598 |
3.9e-20 | FFCP PHASE1:Hg19::chr1:68698197..68698214,-#_523ae4db432d985124ac7e7188ea9bad | p1@WLS |
3.9e-20 | FFCP PHASE2:Hg19::chr1:68698197..68698214,-#_523ae4db432d985124ac7e7188ea9bad | p1@WLS |
5.62e-20 | FFCP PHASE1:Hg19::chr16:89787269..89787359,-#_823cc04d67b1d0a774f97f54e7035d3d | p1@C16orf7 |
5.62e-20 | FFCP PHASE2:Hg19::chr16:89787269..89787359,-#_823cc04d67b1d0a774f97f54e7035d3d | p1@C16orf7 |
6.21e-20 | FFCP PHASE1:Hg19::chr2:153191678..153191697,+#_4012c8adeb686a84872b8b44dc2217e6 | p1@FMNL2 |
6.21e-20 | FFCP PHASE2:Hg19::chr2:153191678..153191697,+#_4012c8adeb686a84872b8b44dc2217e6 | p1@FMNL2 |
7.05e-20 | FFCP PHASE2:Hg19::chr15:64995399..64995422,-#_a0673acefa04cc54109e1a016387d187 | p1@OAZ2 |
7.05e-20 | FFCP PHASE1:Hg19::chr15:64995399..64995422,-#_a0673acefa04cc54109e1a016387d187 | p1@OAZ2 |
7.55e-20 | FFCP PHASE2:Hg19::chr10:25012800..25012822,-#_e16a7269f5ff8717f5f65cc41e4ad213 | p1@ARHGAP21 |
7.55e-20 | FFCP PHASE1:Hg19::chr10:25012800..25012822,-#_e16a7269f5ff8717f5f65cc41e4ad213 | p1@ARHGAP21 |
1.14e-19 | FFCP PHASE1:Hg19::chr6:123110389..123110441,+#_eaa8845d2d19acc4a88175de9109d64b | p1@SMPDL3A |
1.14e-19 | FFCP PHASE2:Hg19::chr6:123110389..123110441,+#_eaa8845d2d19acc4a88175de9109d64b | p1@SMPDL3A |
1.21e-19 | FFCP PHASE2:Hg19::chr20:23614485..23614564,-#_6ad72a97905ec28e8ac946c6bfcee604 | p@chr20:23614485..23614564, - |
1.21e-19 | FFCP PHASE1:Hg19::chr20:23614485..23614564,-#_6ad72a97905ec28e8ac946c6bfcee604 | p@chr20:23614485..23614564, - |
1.23e-19 | FFCP PHASE1:Hg19::chr4:77134999..77135036,-#_ea92c963e05ded40c88b0250c9642f41 | p3@SCARB2 |
1.23e-19 | FFCP PHASE2:Hg19::chr4:77134999..77135036,-#_ea92c963e05ded40c88b0250c9642f41 | p3@SCARB2 |
1.59e-19 | FFCP PHASE2:Hg19::chr12:52345448..52345532,+#_4292215ed2e38922cfcd1bbf5d17ae06 | p1@ACVR1B |
1.59e-19 | FFCP PHASE1:Hg19::chr12:52345448..52345532,+#_4292215ed2e38922cfcd1bbf5d17ae06 | p1@ACVR1B |
1.75e-19 | FFCP PHASE2:Hg19::chr16:2563941..2563983,+#_fc839cd0850ee4913f8f56ba475423f8 | p1@ATP6V0C |
1.75e-19 | FFCP PHASE1:Hg19::chr16:2563941..2563983,+#_fc839cd0850ee4913f8f56ba475423f8 | p1@ATP6V0C |
1.76e-19 | FFCP PHASE1:Hg19::chr8:28559004..28559039,+#_0f8f8a0edafbff7b6e1bd8bb39f67bc9 | p1@EXTL3 |
1.76e-19 | FFCP PHASE2:Hg19::chr8:28559004..28559039,+#_0f8f8a0edafbff7b6e1bd8bb39f67bc9 | p1@EXTL3 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.