UBERON:0004875: Difference between revisions
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|xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003 | |xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003 | ||
|is_a=UBERON:0005423 | |is_a=UBERON:0005423 | ||
|synonym= | |synonym="chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
|comment=part_of or develops_from urogenital ridge? | |comment=part_of or develops_from urogenital ridge? | ||
|alt_id= | |alt_id= | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:05, 26 June 2012
| Name: | nephrogenic cord | ||
|---|---|---|---|
| Definition: | "a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord] | ||
| Xrefs: |
| ||
| Synonyms: | "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
| Comments: | part_of or develops_from urogenital ridge? |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|
Children
| part of: | UBERON:0005754 (rostral part of nephrogenic cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90155966..90155989,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:90155966..90155989, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_2c808356ccd804cd36d69a04f78b05be | p@chr18:46301295..46301302, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379065..21379072,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379065..21379072, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35585507..35585517,-#_2c808356ccd804cd36d69a04f78b05be | p4@Gm17727 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31377177..31377184,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31377177..31377184, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:39707572..39707583,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:39707572..39707583, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:54678902..54678911,-#_2c808356ccd804cd36d69a04f78b05be | p@chr15:54678902..54678911, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:96140694..96140720,+#_2c808356ccd804cd36d69a04f78b05be | p@chr11:96140694..96140720, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr19:24582739..24582748,-#_2c808356ccd804cd36d69a04f78b05be | p@chr19:24582739..24582748, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:53938008..53938022,+#_2c808356ccd804cd36d69a04f78b05be | p11@P4ha2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:31507623..31507631,+#_2c808356ccd804cd36d69a04f78b05be | p4@Atp4a |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:106730107..106730125,-#_2c808356ccd804cd36d69a04f78b05be | p@chr4:106730107..106730125, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379845..31379855,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31379845..31379855, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:43230846..43230884, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr3:146278590..146278595,-#_2c808356ccd804cd36d69a04f78b05be | p10@Dnase2b |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21381141..21381155,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21381141..21381155, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:54678983..54678995,-#_2c808356ccd804cd36d69a04f78b05be | p@chr15:54678983..54678995, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_2c808356ccd804cd36d69a04f78b05be | p2@Rnase13 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_2c808356ccd804cd36d69a04f78b05be | p@chr1:168436322..168436326, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_2c808356ccd804cd36d69a04f78b05be | p2@Defb23 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:59845404..59845416,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:59845404..59845416, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:85390145..85390153,+#_2c808356ccd804cd36d69a04f78b05be | p@chr10:85390145..85390153, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:75866210..75866235,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:75866210..75866235, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:151928014..151928021, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:123977104..123977120,-#_2c808356ccd804cd36d69a04f78b05be | p1@ENSMUST00000139012, p1@uc008uqo.1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_2c808356ccd804cd36d69a04f78b05be | p@chr14:103837894..103837900, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:51627586..51627595,+#_2c808356ccd804cd36d69a04f78b05be | p4@Rnase10 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:51677141..51677148,-#_2c808356ccd804cd36d69a04f78b05be | p7@Rnase12 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379322..21379338, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr6:147624258..147624285,-#_2c808356ccd804cd36d69a04f78b05be | p@chr6:147624258..147624285, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164464249..164464258,-#_2c808356ccd804cd36d69a04f78b05be | p@chr2:164464249..164464258, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_2c808356ccd804cd36d69a04f78b05be | p5@Eddm3b |
| 4.54e-44 | FFCP PHASE1:Mm9::chr3:146278590..146278595,-#_2c808356ccd804cd36d69a04f78b05be | p10@Dnase2b |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21381777..21381789,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21381777..21381789, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:126591032..126591039, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:165219453..165219469,-#_2c808356ccd804cd36d69a04f78b05be | p11@Prrx1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:20219008..20219045,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:20219008..20219045, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:6204391..6204398,+#_2c808356ccd804cd36d69a04f78b05be | p2@Gm6792 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90368977..90368987,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:90368977..90368987, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:50280152..50280179,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:50280152..50280179, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:44261480..44261486,+#_2c808356ccd804cd36d69a04f78b05be | p@chr18:44261480..44261486, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:70779586..70779596,+#_2c808356ccd804cd36d69a04f78b05be | p@chr9:70779586..70779596, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26730625..26730636,-#_2c808356ccd804cd36d69a04f78b05be | p3@Gm1110 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:110773731..110773753,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:110773731..110773753, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19141447..19141469,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19141447..19141469, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:25677632..25677636,-#_2c808356ccd804cd36d69a04f78b05be | p@chr2:25677632..25677636, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:130496260..130496269,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:130496260..130496269, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_2c808356ccd804cd36d69a04f78b05be | p@chr16:22504758..22504766, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:152302739..152302742,+#_2c808356ccd804cd36d69a04f78b05be | p5@Defb20 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:148625223..148625234,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:148625223..148625234, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:75347689..75347703,+#_2c808356ccd804cd36d69a04f78b05be | p@chr15:75347689..75347703, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:87936213..87936218,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:87936213..87936218, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_2c808356ccd804cd36d69a04f78b05be | p@chr14:69143309..69143319, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:20422498..20422506,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:20422498..20422506, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:104945515..104945524,-#_2c808356ccd804cd36d69a04f78b05be | p@chr12:104945515..104945524, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:158083973..158083982,+#_2c808356ccd804cd36d69a04f78b05be | p3@Bpi |
| 4.54e-44 | FFCP PHASE1:Mm9::chr18:74784728..74784738,+#_2c808356ccd804cd36d69a04f78b05be | p@chr18:74784728..74784738, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:35252614..35252635,-#_2c808356ccd804cd36d69a04f78b05be | p3@Ly6g5b |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19062951..19062955,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19062951..19062955, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:89596972..89596981,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:89596972..89596981, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101959159..101959163,+#_2c808356ccd804cd36d69a04f78b05be | p@chr11:101959159..101959163, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35651679..35651691,-#_2c808356ccd804cd36d69a04f78b05be | p5@9230110F15Rik |
