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|def="A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
|def="A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
|xref=
|xref=
|is_a=UBERON:0000058;;UBERON:0003914;;UBERON:0004819;;UBERON:0006553;;UBERON:0006555
|is_a=UBERON:0003914;;UBERON:0004819;;UBERON:0006553;;UBERON:0006555
|synonym=
|synonym=
|comment=pronephric duct or mesonephric duct
|comment=pronephric duct or mesonephric duct
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0002113
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:08, 26 June 2012

Name:nephric duct
Definition:"A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
Comments:pronephric duct or mesonephric duct

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006553(renal duct),UBERON:0006555(excretory tube)



Children

is a:UBERON:0003060 (pronephric duct),UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009201 (nephric duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
3.28e-58FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_006addc8dc83332a4f4d9db9adb060d7p@chr3:65253465..65253475, +
3.28e-58FFCP PHASE2:Mm9::chr9:42151966..42151976,-#_006addc8dc83332a4f4d9db9adb060d7p9@Tecta
3.28e-58FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_006addc8dc83332a4f4d9db9adb060d7p11@Wars
3.28e-58FFCP PHASE2:Mm9::chr14:67453354..67453365,-#_006addc8dc83332a4f4d9db9adb060d7p@chr14:67453354..67453365, -
3.28e-58FFCP PHASE2:Mm9::chr14:63611303..63611312,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:63611303..63611312, +
3.28e-58FFCP PHASE2:Mm9::chr8:19141471..19141518,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141471..19141518, -
3.28e-58FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:91107095..91107103, +
3.28e-58FFCP PHASE2:Mm9::chr13:46041606..46041640,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:46041606..46041640, -
3.28e-58FFCP PHASE1:Mm9::chrX:50280199..50280211,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280199..50280211, +
3.28e-58FFCP PHASE1:Mm9::chr2:148676901..148676906,-#_006addc8dc83332a4f4d9db9adb060d7p8@9230104L09Rik
3.28e-58FFCP PHASE2:Mm9::chr13:21379159..21379162,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379159..21379162, -
3.28e-58FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:96150839..96150842, -
3.28e-58FFCP PHASE2:Mm9::chr5:77645280..77645295,-#_006addc8dc83332a4f4d9db9adb060d7p@chr5:77645280..77645295, -
3.28e-58FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:63611303..63611312, +
3.28e-58FFCP PHASE2:Mm9::chr9:26704579..26704582,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26704579..26704582, -
3.28e-58FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141482..19141496, +
3.28e-58FFCP PHASE1:Mm9::chr5:110773731..110773753,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:110773731..110773753, +
3.28e-58FFCP PHASE1:Mm9::chr2:158083973..158083982,+#_006addc8dc83332a4f4d9db9adb060d7p3@Bpi
3.28e-58FFCP PHASE1:Mm9::chr16:28323634..28323657,-#_006addc8dc83332a4f4d9db9adb060d7p@chr16:28323634..28323657, -
3.28e-58FFCP PHASE2:Mm9::chr2:164499572..164499580,-#_006addc8dc83332a4f4d9db9adb060d7p2@Wfdc11
3.28e-58FFCP PHASE2:Mm9::chr7:75293847..75293851,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:75293847..75293851, +
3.28e-58FFCP PHASE1:Mm9::chr18:44319583..44319592,-#_006addc8dc83332a4f4d9db9adb060d7p@chr18:44319583..44319592, -
3.28e-58FFCP PHASE2:Mm9::chr4:123977104..123977120,-#_006addc8dc83332a4f4d9db9adb060d7p1@ENSMUST00000139012, p1@uc008uqo.1
3.28e-58FFCP PHASE1:Mm9::chr9:42151966..42151976,-#_006addc8dc83332a4f4d9db9adb060d7p9@Tecta
3.28e-58FFCP PHASE2:Mm9::chr6:49817766..49817772,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:49817766..49817772, -
3.28e-58FFCP PHASE2:Mm9::chr13:21378927..21378932,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378927..21378932, -
3.28e-58FFCP PHASE1:Mm9::chr5:35930706..35930717,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:35930706..35930717, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379430..21379437, -
3.28e-58FFCP PHASE2:Mm9::chr15:54678983..54678995,-#_006addc8dc83332a4f4d9db9adb060d7p@chr15:54678983..54678995, -
3.28e-58FFCP PHASE1:Mm9::chr13:23683348..23683398,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:23683348..23683398, +
3.28e-58FFCP PHASE2:Mm9::chr4:138824620..138824627,+#_006addc8dc83332a4f4d9db9adb060d7p@chr4:138824620..138824627, +
3.28e-58FFCP PHASE2:Mm9::chr14:63611201..63611210,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:63611201..63611210, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379550..31379559,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379550..31379559, +
3.28e-58FFCP PHASE1:Mm9::chr1:90155951..90155962,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155951..90155962, +
3.28e-58FFCP PHASE2:Mm9::chr1:39707572..39707583,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:39707572..39707583, +
3.28e-58FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:23045782..23045791, +
3.28e-58FFCP PHASE1:Mm9::chr1:155697874..155697885,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155697874..155697885, -
3.28e-58FFCP PHASE2:Mm9::chr9:56469136..56469145,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:56469136..56469145, -
3.28e-58FFCP PHASE2:Mm9::chr17:24865194..24865204,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:24865194..24865204, +
3.28e-58FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_006addc8dc83332a4f4d9db9adb060d7p3@Gm3428
3.28e-58FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:113585714..113585722, -
3.28e-58FFCP PHASE2:Mm9::chr11:53938008..53938022,+#_006addc8dc83332a4f4d9db9adb060d7p11@P4ha2
3.28e-58FFCP PHASE2:Mm9::chr4:106731469..106731481,-#_006addc8dc83332a4f4d9db9adb060d7p@chr4:106731469..106731481, -
3.28e-58FFCP PHASE2:Mm9::chr14:51677155..51677162,-#_006addc8dc83332a4f4d9db9adb060d7p5@Rnase12
3.28e-58FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:75798157..75798162, -
3.28e-58FFCP PHASE1:Mm9::chr3:107731917..107731926,-#_006addc8dc83332a4f4d9db9adb060d7p@chr3:107731917..107731926, -
3.28e-58FFCP PHASE2:Mm9::chrX:50280181..50280192,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280181..50280192, +
3.28e-58FFCP PHASE2:Mm9::chr13:21381141..21381155,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21381141..21381155, -
3.28e-58FFCP PHASE2:Mm9::chr2:167688595..167688624,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:167688595..167688624, +
3.28e-58FFCP PHASE2:Mm9::chr5:31377177..31377184,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31377177..31377184, +
3.28e-58FFCP PHASE1:Mm9::chrX:103276578..103276585,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:103276578..103276585, +
3.28e-58FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26704579..26704582, -
3.28e-58FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_006addc8dc83332a4f4d9db9adb060d7p@chr6:118298429..118298448, +
3.28e-58FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_006addc8dc83332a4f4d9db9adb060d7p@chr12:114385720..114385732, -
3.28e-58FFCP PHASE2:Mm9::chr5:88272459..88272484,-#_006addc8dc83332a4f4d9db9adb060d7p@chr5:88272459..88272484, -
3.28e-58FFCP PHASE1:Mm9::chr9:35585507..35585517,-#_006addc8dc83332a4f4d9db9adb060d7p4@Gm17727
3.28e-58FFCP PHASE2:Mm9::chr15:83143938..83143953,-#_006addc8dc83332a4f4d9db9adb060d7p@chr15:83143938..83143953, -
3.28e-58FFCP PHASE2:Mm9::chr1:155698178..155698191,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155698178..155698191, -
3.28e-58FFCP PHASE2:Mm9::chr5:112721323..112721328,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:112721323..112721328, +
3.28e-58FFCP PHASE1:Mm9::chr1:168436322..168436326,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:168436322..168436326, -
3.28e-58FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_006addc8dc83332a4f4d9db9adb060d7p7@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr13:21378927..21378932,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378927..21378932, -
3.28e-58FFCP PHASE2:Mm9::chr14:51670340..51670346,-#_006addc8dc83332a4f4d9db9adb060d7p@chr14:51670340..51670346, -
3.28e-58FFCP PHASE1:Mm9::chr2:152302739..152302742,+#_006addc8dc83332a4f4d9db9adb060d7p5@Defb20
3.28e-58FFCP PHASE2:Mm9::chr9:35651679..35651691,-#_006addc8dc83332a4f4d9db9adb060d7p5@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr11:98567868..98567884,-#_006addc8dc83332a4f4d9db9adb060d7p5@Med24
3.28e-58FFCP PHASE1:Mm9::chr11:101958855..101958871,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958855..101958871, -
3.28e-58FFCP PHASE1:Mm9::chr5:77645280..77645295,-#_006addc8dc83332a4f4d9db9adb060d7p@chr5:77645280..77645295, -
3.28e-58FFCP PHASE2:Mm9::chr8:126604677..126604701,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:126604677..126604701, -
3.28e-58FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597660..89597668, +
3.28e-58FFCP PHASE2:Mm9::chr9:26730625..26730636,-#_006addc8dc83332a4f4d9db9adb060d7p3@Gm1110
3.28e-58FFCP PHASE2:Mm9::chr2:25348986..25348999,-#_006addc8dc83332a4f4d9db9adb060d7p4@Lcn12
3.28e-58FFCP PHASE2:Mm9::chr2:164434346..164434353,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164434346..164434353, -
3.28e-58FFCP PHASE2:Mm9::chr2:148625223..148625234,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:148625223..148625234, +
3.28e-58FFCP PHASE1:Mm9::chrX:130496372..130496393,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496372..130496393, -
3.28e-58FFCP PHASE1:Mm9::chr2:160573108..160573123,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:160573108..160573123, +
3.28e-58FFCP PHASE1:Mm9::chr11:20817297..20817313,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:20817297..20817313, +
3.28e-58FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155923..90155932, +
3.28e-58FFCP PHASE1:Mm9::chr2:74440187..74440209,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:74440187..74440209, -
3.28e-58FFCP PHASE1:Mm9::chr1:156048695..156048707,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:156048695..156048707, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379550..31379559,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379550..31379559, +
3.28e-58FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:25706249..25706254, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379098..21379104,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379098..21379104, -
3.28e-58FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_006addc8dc83332a4f4d9db9adb060d7p@chr10:91753336..91753348, -
3.28e-58FFCP PHASE1:Mm9::chr9:65941913..65941923,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:65941913..65941923, -
3.28e-58FFCP PHASE1:Mm9::chr2:152302813..152302821,+#_006addc8dc83332a4f4d9db9adb060d7p3@Defb20
3.28e-58FFCP PHASE2:Mm9::chr1:87936238..87936249,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:87936238..87936249, +
3.28e-58FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:63611201..63611210, +
3.28e-58FFCP PHASE1:Mm9::chr13:21381777..21381789,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21381777..21381789, -
3.28e-58FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141371..19141383, +
3.28e-58FFCP PHASE1:Mm9::chr17:73221062..73221084,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:73221062..73221084, +
3.28e-58FFCP PHASE1:Mm9::chr13:52712765..52712772,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:52712765..52712772, +
3.28e-58FFCP PHASE1:Mm9::chrX:12571679..12571688,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:12571679..12571688, -
3.28e-58FFCP PHASE1:Mm9::chr9:26730625..26730636,-#_006addc8dc83332a4f4d9db9adb060d7p3@Gm1110
3.28e-58FFCP PHASE2:Mm9::chr18:44261480..44261486,+#_006addc8dc83332a4f4d9db9adb060d7p@chr18:44261480..44261486, +
3.28e-58FFCP PHASE1:Mm9::chr16:25752183..25752203,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:25752183..25752203, +
3.28e-58FFCP PHASE1:Mm9::chr14:66589365..66589371,+#_006addc8dc83332a4f4d9db9adb060d7p19@Clu
3.28e-58FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_006addc8dc83332a4f4d9db9adb060d7p2@ENSMUST00000152401

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