UBERON:0002791: Difference between revisions
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0001893 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} |
Revision as of 13:32, 27 June 2012
Name: | regional part of telencephalon | |
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Definition: | "A regional part of brain that is part of a telencephalon [Obol]." [OBOL:automatic] | |
Xrefs: |
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Synonyms: |
"anatomical structure of brain of telencephalon" EXACT [OBOL:automatic] "biological structure of brain of telencephalon" EXACT [OBOL:automatic] "brain anatomical structure of telencephalon" EXACT [OBOL:automatic] "brain biological structure of telencephalon" EXACT [OBOL:automatic] "neuraxis segment of telencephalon" EXACT [OBOL:automatic] "regional part of brain of telencephalon" EXACT [OBOL:automatic] "segment of brain of telencephalon" EXACT [OBOL:automatic] "segment of telencephalon" EXACT [NIF_GrossAnatomy:birnlex_1700] "telencephalon anatomical structure of brain" EXACT [OBOL:automatic] "telencephalon biological structure of brain" EXACT [OBOL:automatic] "telencephalon brain anatomical structure" EXACT [OBOL:automatic] "telencephalon brain biological structure" EXACT [OBOL:automatic] "telencephalon neuraxis segment" EXACT [OBOL:automatic] "telencephalon regional part of brain" EXACT [OBOL:automatic] "telencephalon segment" EXACT [FMA:62374] "telencephalon segment of brain" EXACT [OBOL:automatic] | |
Alt_id: | UBERON:NIF_GrossAnatomy_birnlex_1700-FMA_62374 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002780(regional part of forebrain) |
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part_of: | UBERON:0001893(telencephalon) |
Children
is a: | UBERON:0000203 (pallium),UBERON:0000204 (ventral part of telencephalon),UBERON:0001954 (Ammon's horn),UBERON:0002421 (hippocampal formation),UBERON:0002619 (regional part of cerebral cortex),UBERON:0005366 (olfactory lobe) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10036-101E9 (occipital pole, adult, pool1)
- 10037-101F1 (nucleus accumbens, adult, pool1)
- 10039-101F3 (insula, adult, pool1)
- 10040-101F4 (frontal lobe, adult, pool1)
- 10071-101I8 (duodenum, fetal, donor1)
- 10072-101I9 (parietal lobe, fetal, donor1)
- 10073-102A1 (occipital lobe, fetal, donor1)
... further results Mouse (Mus musculus)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10036-101E9 (occipital pole, adult, pool1)
- 10037-101F1 (nucleus accumbens, adult, pool1)
- 10039-101F3 (insula, adult, pool1)
- 10040-101F4 (frontal lobe, adult, pool1)
- 10071-101I8 (duodenum, fetal, donor1)
- 10072-101I9 (parietal lobe, fetal, donor1)
- 10073-102A1 (occipital lobe, fetal, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002791 (regional part of telencephalon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data