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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
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Revision as of 13:32, 27 June 2012

Name:regional part of telencephalon
Definition:"A regional part of brain that is part of a telencephalon [Obol]." [OBOL:automatic]
Xrefs:
links:

FMA:62374

NIF_GrossAnatomy:birnlex_1700
Synonyms: "anatomical structure of brain of telencephalon" EXACT [OBOL:automatic]
"biological structure of brain of telencephalon" EXACT [OBOL:automatic]
"brain anatomical structure of telencephalon" EXACT [OBOL:automatic]
"brain biological structure of telencephalon" EXACT [OBOL:automatic]
"neuraxis segment of telencephalon" EXACT [OBOL:automatic]
"regional part of brain of telencephalon" EXACT [OBOL:automatic]
"segment of brain of telencephalon" EXACT [OBOL:automatic]
"segment of telencephalon" EXACT [NIF_GrossAnatomy:birnlex_1700]
"telencephalon anatomical structure of brain" EXACT [OBOL:automatic]
"telencephalon biological structure of brain" EXACT [OBOL:automatic]
"telencephalon brain anatomical structure" EXACT [OBOL:automatic]
"telencephalon brain biological structure" EXACT [OBOL:automatic]
"telencephalon neuraxis segment" EXACT [OBOL:automatic]
"telencephalon regional part of brain" EXACT [OBOL:automatic]
"telencephalon segment" EXACT [FMA:62374]
"telencephalon segment of brain" EXACT [OBOL:automatic]
Alt_id: UBERON:NIF_GrossAnatomy_birnlex_1700-FMA_62374

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002780(regional part of forebrain)
part_of:UBERON:0001893(telencephalon)



Children

is a:UBERON:0000203 (pallium),UBERON:0000204 (ventral part of telencephalon),UBERON:0001954 (Ammon's horn),UBERON:0002421 (hippocampal formation),UBERON:0002619 (regional part of cerebral cortex),UBERON:0005366 (olfactory lobe)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002791 (regional part of telencephalon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data