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UBERON:0002780

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Name:regional part of forebrain
Namespace:FANTOM
Definition:"A regional part of brain that is part of a forebrain [Obol]." [OBOL:automatic]
Xrefs:
links:

FMA:61996

NIF_GrossAnatomy:birnlex_1677
Synonyms: "anatomical structure of brain of forebrain" EXACT [OBOL:automatic]
"biological structure of brain of forebrain" EXACT [OBOL:automatic]
"brain anatomical structure of forebrain" EXACT [OBOL:automatic]
"brain biological structure of forebrain" EXACT [OBOL:automatic]
"forebrain anatomical structure of brain" EXACT [OBOL:automatic]
"forebrain biological structure of brain" EXACT [OBOL:automatic]
"forebrain brain anatomical structure" EXACT [OBOL:automatic]
"forebrain brain biological structure" EXACT [OBOL:automatic]
"forebrain neuraxis segment" EXACT [OBOL:automatic]
"forebrain regional part of brain" EXACT [OBOL:automatic]
"forebrain segment" EXACT [FMA:61996]
"forebrain segment of brain" EXACT [OBOL:automatic]
"neuraxis segment of forebrain" EXACT [OBOL:automatic]
"regional part of brain of forebrain" EXACT [OBOL:automatic]
"segment of brain of forebrain" EXACT [OBOL:automatic]
"segment of forebrain" EXACT [NIF_GrossAnatomy:birnlex_1677]
Alt_id: UBERON:NIF_GrossAnatomy_birnlex_1677-FMA_61996

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002616(regional part of brain)
part_of:UBERON:0001890(forebrain)



Children

is a:UBERON:0001893 (telencephalon),UBERON:0001894 (diencephalon),UBERON:0002743 (basal forebrain),UBERON:0002784 (regional part of diencephalon),UBERON:0002791 (regional part of telencephalon),UBERON:0006098 (basal nuclear complex)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002780 (regional part of forebrain), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data