UBERON:0002780
From FANTOM5_SSTAR
Name: | regional part of forebrain | |
---|---|---|
Namespace: | FANTOM | |
Definition: | "A regional part of brain that is part of a forebrain [Obol]." [OBOL:automatic] | |
Xrefs: |
| |
Synonyms: |
"anatomical structure of brain of forebrain" EXACT [OBOL:automatic] "biological structure of brain of forebrain" EXACT [OBOL:automatic] "brain anatomical structure of forebrain" EXACT [OBOL:automatic] "brain biological structure of forebrain" EXACT [OBOL:automatic] "forebrain anatomical structure of brain" EXACT [OBOL:automatic] "forebrain biological structure of brain" EXACT [OBOL:automatic] "forebrain brain anatomical structure" EXACT [OBOL:automatic] "forebrain brain biological structure" EXACT [OBOL:automatic] "forebrain neuraxis segment" EXACT [OBOL:automatic] "forebrain regional part of brain" EXACT [OBOL:automatic] "forebrain segment" EXACT [FMA:61996] "forebrain segment of brain" EXACT [OBOL:automatic] "neuraxis segment of forebrain" EXACT [OBOL:automatic] "regional part of brain of forebrain" EXACT [OBOL:automatic] "segment of brain of forebrain" EXACT [OBOL:automatic] "segment of forebrain" EXACT [NIF_GrossAnatomy:birnlex_1677] | |
Alt_id: | UBERON:NIF_GrossAnatomy_birnlex_1677-FMA_61996 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002616(regional part of brain) |
---|---|
part_of: | UBERON:0001890(forebrain) |
Children
is a: | UBERON:0001893 (telencephalon),UBERON:0001894 (diencephalon),UBERON:0002743 (basal forebrain),UBERON:0002784 (regional part of diencephalon),UBERON:0002791 (regional part of telencephalon),UBERON:0006098 (basal nuclear complex) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10035-101E8 (paracentral gyrus, adult, pool1)
- 10036-101E9 (occipital pole, adult, pool1)
- 10037-101F1 (nucleus accumbens, adult, pool1)
- 10039-101F3 (insula, adult, pool1)
- 10040-101F4 (frontal lobe, adult, pool1)
- 10042-101F6 (corpus callosum, adult, pool1)
- 10071-101I8 (duodenum, fetal, donor1)
... further results Mouse (Mus musculus)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10035-101E8 (paracentral gyrus, adult, pool1)
- 10036-101E9 (occipital pole, adult, pool1)
- 10037-101F1 (nucleus accumbens, adult, pool1)
- 10039-101F3 (insula, adult, pool1)
- 10040-101F4 (frontal lobe, adult, pool1)
- 10042-101F6 (corpus callosum, adult, pool1)
- 10071-101I8 (duodenum, fetal, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002780 (regional part of forebrain), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data