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{{CL
{{CL
|id=CL:0002536
|alt_id=
|name=amniotic epithelial cell
|namespace=cell
|def="An epithelial cell that is part of the amnion." [GOC:tfm]
|xref=
|is_a=CL:0000066;;CL:0000349
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-02-28T12:38:01Z
|def="An epithelial cell that is part of the amnion." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002536
|is_a=CL:0000066 ;;CL:0000349
|is_obsolete=
|located_in=
|located_in=
|name=amniotic epithelial cell
|namespace=cell
|obo_creation_date=2011-02-28T12:38:01Z
|part_of=UBERON:0000305
|part_of=UBERON:0000305
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:28, 12 September 2014

Name:amniotic epithelial cell
Namespace:cell
Definition:"An epithelial cell that is part of the amnion." [GOC:tfm]
Created by:tmeehan
Creation date:2011-02-28T12:38:01Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0000349(extraembryonic cell)
part_of:UBERON:0000305(amnion)



Children


derives from:FF:0000009 (human amniotic epithelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002536 (amniotic epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr1:209704633..209704641,+#_066c6329507c9b02a7fa29c4baa30956p@chr1:209704633..209704641, +
1.55e-98FFCP PHASE2:Hg19::chr1:209704633..209704641,+#_066c6329507c9b02a7fa29c4baa30956p@chr1:209704633..209704641, +
1.56e-79FFCP PHASE2:Hg19::chr1:209704648..209704656,+#_5b14b07f1f57f3e8ba1fff97c8aeefcap@chr1:209704648..209704656, +
1.56e-79FFCP PHASE1:Hg19::chr1:209704648..209704656,+#_5b14b07f1f57f3e8ba1fff97c8aeefcap@chr1:209704648..209704656, +
2.34e-79FFCP PHASE1:Hg19::chr1:209704573..209704587,+#_2c1fe1a394323c4373ff5791bc8a4058p@chr1:209704573..209704587, +
2.34e-79FFCP PHASE2:Hg19::chr1:209704573..209704587,+#_2c1fe1a394323c4373ff5791bc8a4058p@chr1:209704573..209704587, +
7.41e-67FFCP PHASE1:Hg19::chr2:161057428..161057450,-#_232755a05166b86418a430d82741a378p@chr2:161057428..161057450, -
7.41e-67FFCP PHASE1:Hg19::chr1:209704612..209704625,+#_232755a05166b86418a430d82741a378p@chr1:209704612..209704625, +
7.41e-67FFCP PHASE2:Hg19::chr2:161057428..161057450,-#_232755a05166b86418a430d82741a378p@chr2:161057428..161057450, -
7.41e-67FFCP PHASE2:Hg19::chr1:209704612..209704625,+#_232755a05166b86418a430d82741a378p@chr1:209704612..209704625, +
1.04e-66FFCP PHASE2:Hg19::chr3:55384353..55384357,+#_f17000615815df2c43829a18b9d3df17p@chr3:55384353..55384357, +
1.04e-66FFCP PHASE1:Hg19::chr3:55384353..55384357,+#_f17000615815df2c43829a18b9d3df17p@chr3:55384353..55384357, +
2.84e-66FFCP PHASE1:Hg19::chr5:89143573..89143607,-#_659202826281678384e47799a903b431p@chr5:89143573..89143607, -
2.84e-66FFCP PHASE2:Hg19::chr5:89143573..89143607,-#_659202826281678384e47799a903b431p@chr5:89143573..89143607, -
1.08e-65FFCP PHASE2:Hg19::chr19:1584972..1584977,-#_edc04fbf55195b5d2f965523afd97e62p5@M77818
1.08e-65FFCP PHASE1:Hg19::chr19:1584972..1584977,-#_edc04fbf55195b5d2f965523afd97e62p5@M77818
2.02e-57FFCP PHASE1:Hg19::chr5:170176045..170176055,-#_bdcb9523b1d4a008b98eaa654ce7d475p@chr5:170176045..170176055, -
2.02e-57FFCP PHASE2:Hg19::chr5:170176045..170176055,-#_bdcb9523b1d4a008b98eaa654ce7d475p@chr5:170176045..170176055, -
3.58e-57FFCP PHASE2:Hg19::chr2:237683020..237683029,+#_f4ff4dc7955060186c44401c3466c706p@chr2:237683020..237683029, +
3.58e-57FFCP PHASE1:Hg19::chr2:237683020..237683029,+#_f4ff4dc7955060186c44401c3466c706p@chr2:237683020..237683029, +
3.58e-57FFCP PHASE2:Hg19::chr2:237683109..237683120,+#_f4ff4dc7955060186c44401c3466c706p@chr2:237683109..237683120, +
3.58e-57FFCP PHASE1:Hg19::chr2:237683109..237683120,+#_f4ff4dc7955060186c44401c3466c706p@chr2:237683109..237683120, +
4.77e-57FFCP PHASE2:Hg19::chr9:88126069..88126080,-#_2fd07104c77a4dd9a5f8ce4607577557p@chr9:88126069..88126080, -
4.77e-57FFCP PHASE1:Hg19::chr9:88126069..88126080,-#_2fd07104c77a4dd9a5f8ce4607577557p@chr9:88126069..88126080, -
6.36e-57FFCP PHASE2:Hg19::chr8:29452974..29452996,+#_81dd2bc5e11f842f462c65894afa1975p@chr8:29452974..29452996, +
6.36e-57FFCP PHASE1:Hg19::chr8:29452974..29452996,+#_81dd2bc5e11f842f462c65894afa1975p@chr8:29452974..29452996, +
8.47e-57FFCP PHASE2:Hg19::chrX:48374277..48374289,+#_3fb0c195c6b05980a399fd4878bf8ac7p@chrX:48374277..48374289, +
8.47e-57FFCP PHASE1:Hg19::chrX:48374277..48374289,+#_3fb0c195c6b05980a399fd4878bf8ac7p@chrX:48374277..48374289, +
8.47e-57FFCP PHASE1:Hg19::chr14:104202639..104202646,-#_3fb0c195c6b05980a399fd4878bf8ac7p@chr14:104202639..104202646, -
8.47e-57FFCP PHASE1:Hg19::chr5:170239966..170239982,+#_3fb0c195c6b05980a399fd4878bf8ac7p@chr5:170239966..170239982, +
8.47e-57FFCP PHASE2:Hg19::chr5:170239966..170239982,+#_3fb0c195c6b05980a399fd4878bf8ac7p@chr5:170239966..170239982, +
8.47e-57FFCP PHASE2:Hg19::chr14:104202639..104202646,-#_3fb0c195c6b05980a399fd4878bf8ac7p@chr14:104202639..104202646, -
8.47e-57FFCP PHASE1:Hg19::chr20:61288249..61288259,+#_3fb0c195c6b05980a399fd4878bf8ac7p12@SLCO4A1
8.47e-57FFCP PHASE2:Hg19::chr20:61288249..61288259,+#_3fb0c195c6b05980a399fd4878bf8ac7p12@SLCO4A1
1.13e-56FFCP PHASE1:Hg19::chr10:131344593..131344605,+#_741355b57dfbacd07edf7295c0f5005dp@chr10:131344593..131344605, +
1.13e-56FFCP PHASE2:Hg19::chr10:131344593..131344605,+#_741355b57dfbacd07edf7295c0f5005dp@chr10:131344593..131344605, +
8.82e-51FFCP PHASE2:Hg19::chr2:95983133..95983144,+#_c70ef0730ec46954e2f5e1ff273dbcacp@chr2:95983133..95983144, +
8.82e-51FFCP PHASE1:Hg19::chr2:95983133..95983144,+#_c70ef0730ec46954e2f5e1ff273dbcacp@chr2:95983133..95983144, +
2.42e-50FFCP PHASE2:Hg19::chr2:237683203..237683210,+#_2b1449cf9d62cdb046a61eb0a9ddcb63p@chr2:237683203..237683210, +
2.42e-50FFCP PHASE1:Hg19::chr2:237683203..237683210,+#_2b1449cf9d62cdb046a61eb0a9ddcb63p@chr2:237683203..237683210, +
2.74e-50FFCP PHASE1:Hg19::chr12:8802094..8802097,-#_c713ba9fb5613e4d534ddc59676044c0p@chr12:8802094..8802097, -
2.74e-50FFCP PHASE2:Hg19::chr12:8802094..8802097,-#_c713ba9fb5613e4d534ddc59676044c0p@chr12:8802094..8802097, -
4.0e-50FFCP PHASE1:Hg19::chr11:5626359..5626406,+#_456505379a7a29f6ba9d31375dfc9e81p8@TRIM6
4.0e-50FFCP PHASE2:Hg19::chr11:5626359..5626406,+#_456505379a7a29f6ba9d31375dfc9e81p8@TRIM6
5.15e-50FFCP PHASE2:Hg19::chr3:146323019..146323049,-#_543b761cb5504eac123d87f8fb6d5826p1@PLSCR5
5.15e-50FFCP PHASE1:Hg19::chr3:146323019..146323049,-#_543b761cb5504eac123d87f8fb6d5826p1@PLSCR5
5.15e-50FFCP PHASE1:Hg19::chr4:177592751..177592777,-#_543b761cb5504eac123d87f8fb6d5826p@chr4:177592751..177592777, -
5.15e-50FFCP PHASE2:Hg19::chr4:177592751..177592777,-#_543b761cb5504eac123d87f8fb6d5826p@chr4:177592751..177592777, -
1.22e-44FFCP PHASE2:Hg19::chr3:123512689..123512717,-#_67bc33a05364f2f9c2856ccbd0ca46a3p36@MYLK
1.22e-44FFCP PHASE2:Hg19::chr2:25862154..25862172,-#_67bc33a05364f2f9c2856ccbd0ca46a3p14@DTNB
1.22e-44FFCP PHASE1:Hg19::chr3:123512689..123512717,-#_67bc33a05364f2f9c2856ccbd0ca46a3p36@MYLK
1.22e-44FFCP PHASE2:Hg19::chr19:36592910..36592917,+#_67bc33a05364f2f9c2856ccbd0ca46a3p@chr19:36592910..36592917, +
1.22e-44FFCP PHASE1:Hg19::chr2:25862154..25862172,-#_67bc33a05364f2f9c2856ccbd0ca46a3p14@DTNB
1.22e-44FFCP PHASE1:Hg19::chr19:36592910..36592917,+#_67bc33a05364f2f9c2856ccbd0ca46a3p@chr19:36592910..36592917, +
2.98e-44FFCP PHASE1:Hg19::chr2:237682972..237682977,+#_4ab3695feee7face5e4d3ac51ca2f172p@chr2:237682972..237682977, +
2.98e-44FFCP PHASE2:Hg19::chr2:237682972..237682977,+#_4ab3695feee7face5e4d3ac51ca2f172p@chr2:237682972..237682977, +
3.72e-44FFCP PHASE1:Hg19::chr2:191897854..191897865,-#_17f858212328a22ff89c70ad8a2b5ff1p@chr2:191897854..191897865, -
3.72e-44FFCP PHASE2:Hg19::chr2:191897854..191897865,-#_17f858212328a22ff89c70ad8a2b5ff1p@chr2:191897854..191897865, -
8.98e-41FFCP PHASE1:Hg19::chr15:72490099..72490109,-#_f547c02980519224a6e5334fb1451b3ep3@GRAMD2
8.98e-41FFCP PHASE2:Hg19::chr15:72490099..72490109,-#_f547c02980519224a6e5334fb1451b3ep3@GRAMD2
8.98e-41FFCP PHASE2:Hg19::chr1:147232729..147232730,-#_f547c02980519224a6e5334fb1451b3ep9@GJA5
8.98e-41FFCP PHASE1:Hg19::chr1:147232729..147232730,-#_f547c02980519224a6e5334fb1451b3ep9@GJA5
1.34e-40FFCP PHASE1:Hg19::chr19:36592959..36592975,+#_bd4d8edeea314a2a5d3a590758a9cc10p@chr19:36592959..36592975, +
1.34e-40FFCP PHASE2:Hg19::chr2:237683038..237683048,+#_bd4d8edeea314a2a5d3a590758a9cc10p@chr2:237683038..237683048, +
1.34e-40FFCP PHASE1:Hg19::chr2:237683038..237683048,+#_bd4d8edeea314a2a5d3a590758a9cc10p@chr2:237683038..237683048, +
1.34e-40FFCP PHASE2:Hg19::chr19:36592959..36592975,+#_bd4d8edeea314a2a5d3a590758a9cc10p@chr19:36592959..36592975, +
1.64e-40FFCP PHASE2:Hg19::chr19:36592982..36592993,+#_cf6afe7bbd2e6d3223e5e3ff012ff7b7p@chr19:36592982..36592993, +
1.64e-40FFCP PHASE1:Hg19::chr19:36592982..36592993,+#_cf6afe7bbd2e6d3223e5e3ff012ff7b7p@chr19:36592982..36592993, +
1.64e-40FFCP PHASE1:Hg19::chr17:38632125..38632156,-#_cf6afe7bbd2e6d3223e5e3ff012ff7b7p@chr17:38632125..38632156, -
1.64e-40FFCP PHASE2:Hg19::chr17:38632125..38632156,-#_cf6afe7bbd2e6d3223e5e3ff012ff7b7p@chr17:38632125..38632156, -
3.01e-40FFCP PHASE1:Hg19::chr18:6286777..6286797,+#_8df20f6d20e43de135437c69882e7d9dp@chr18:6286777..6286797, +
3.01e-40FFCP PHASE2:Hg19::chr18:6286777..6286797,+#_8df20f6d20e43de135437c69882e7d9dp@chr18:6286777..6286797, +
4.73e-37FFCP PHASE1:Hg19::chr16:81679150..81679182,+#_47973a2623425b908af566675d6a5fd9p17@CMIP
4.73e-37FFCP PHASE2:Hg19::chr16:81679150..81679182,+#_47973a2623425b908af566675d6a5fd9p17@CMIP
5.69e-37FFCP PHASE2:Hg19::chr2:28853455..28853476,+#_cd7c0a895cf9def9e902093af2564aa1p@chr2:28853455..28853476, +
5.69e-37FFCP PHASE1:Hg19::chr2:28853455..28853476,+#_cd7c0a895cf9def9e902093af2564aa1p@chr2:28853455..28853476, +
1.18e-36FFCP PHASE1:Hg19::chr6:12161831..12161855,+#_19857938300699242eace3c01a4c78bfp@chr6:12161831..12161855, +
1.18e-36FFCP PHASE2:Hg19::chr6:12161831..12161855,+#_19857938300699242eace3c01a4c78bfp@chr6:12161831..12161855, +
1.42e-36FFCP PHASE1:Hg19::chr2:75796837..75796849,-#_f5223f8cf79dd2f2e793304b95c6277ep6@FAM176A
1.42e-36FFCP PHASE1:Hg19::chr20:61287795..61287809,+#_f5223f8cf79dd2f2e793304b95c6277ep4@SLCO4A1
1.42e-36FFCP PHASE2:Hg19::chr20:61287795..61287809,+#_f5223f8cf79dd2f2e793304b95c6277ep4@SLCO4A1
1.42e-36FFCP PHASE2:Hg19::chr2:62257232..62257274,+#_f5223f8cf79dd2f2e793304b95c6277ep@chr2:62257232..62257274, +
1.42e-36FFCP PHASE1:Hg19::chr2:62257232..62257274,+#_f5223f8cf79dd2f2e793304b95c6277ep@chr2:62257232..62257274, +
1.42e-36FFCP PHASE2:Hg19::chr2:75796837..75796849,-#_f5223f8cf79dd2f2e793304b95c6277ep6@FAM176A
2.18e-34FFCP PHASE2:Hg19::chr2:237683156..237683171,+#_850526cb2172774dd8ab722526c65802p@chr2:237683156..237683171, +
2.18e-34FFCP PHASE1:Hg19::chr2:237683156..237683171,+#_850526cb2172774dd8ab722526c65802p@chr2:237683156..237683171, +
5.04e-34FFCP PHASE1:Hg19::chr5:170210042..170210086,-#_75fc1c951a91a3d1879fe7925d4136a5p@chr5:170210042..170210086, -
5.04e-34FFCP PHASE2:Hg19::chr5:170210042..170210086,-#_75fc1c951a91a3d1879fe7925d4136a5p@chr5:170210042..170210086, -
5.07e-34FFCP PHASE1:Hg19::chr5:153855212..153855222,-#_99d63b39d781b0b8fd0760ef0cc5e1a6p@chr5:153855212..153855222, -
5.07e-34FFCP PHASE2:Hg19::chr5:153855212..153855222,-#_99d63b39d781b0b8fd0760ef0cc5e1a6p@chr5:153855212..153855222, -
6.0e-34FFCP PHASE1:Hg19::chr2:43266741..43266748,-#_8262b961901ee30a9d8ec7657493b8ddp2@ENST00000449766
6.0e-34FFCP PHASE2:Hg19::chr2:43266741..43266748,-#_8262b961901ee30a9d8ec7657493b8ddp2@ENST00000449766
7.05e-34FFCP PHASE1:Hg19::chr14:61952109..61952155,+#_bd561f2bf9e80ab9125edb44eae7e4afp@chr14:61952109..61952155, +
7.05e-34FFCP PHASE2:Hg19::chr14:61952109..61952155,+#_bd561f2bf9e80ab9125edb44eae7e4afp@chr14:61952109..61952155, +
7.05e-34FFCP PHASE1:Hg19::chr11:107729876..107729881,-#_bd561f2bf9e80ab9125edb44eae7e4afp10@SLC35F2
7.05e-34FFCP PHASE2:Hg19::chr11:107729876..107729881,-#_bd561f2bf9e80ab9125edb44eae7e4afp10@SLC35F2
1.39e-33FFCP PHASE1:Hg19::chr5:153858071..153858085,+#_a0697d7738d2c91f1da616997615dd1ap@chr5:153858071..153858085, +
1.39e-33FFCP PHASE2:Hg19::chr5:153858071..153858085,+#_a0697d7738d2c91f1da616997615dd1ap@chr5:153858071..153858085, +
1.93e-33FFCP PHASE1:Hg19::chr13:114542805..114542816,-#_e42cb4fd49a99917d0e1fa5ea6e09c02p@chr13:114542805..114542816, -
1.93e-33FFCP PHASE2:Hg19::chr13:114542805..114542816,-#_e42cb4fd49a99917d0e1fa5ea6e09c02p@chr13:114542805..114542816, -

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