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{{UBERON
{{UBERON
|id=UBERON:0005284
|alt_id=
|name=brain vasculature
|anatomical_img_id=FMA:242007
|namespace=
|def="A vasculature that is part of a brain [Obol]." [OBOL:automatic]
|xref=EFO:0003491;;FMA:242007;;TAO:0000099;;ZFA:0000099
|is_a=UBERON:0004121;;UBERON:0006876
|synonym="vasculature of brain" EXACT [FMA:242007]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A vasculature that is part of a brain [Obol]." [OBOL:automatic]
|subset=vertebrate_core
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005284
|is_a=UBERON:0004121;;UBERON:0006876
|is_obsolete=
|located_in=
|located_in=
|name=brain vasculature
|namespace=
|obo_creation_date=
|part_of=UBERON:0000955
|part_of=UBERON:0000955
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=vertebrate_core
|preceded_by=
|synonym="vasculature of brain" EXACT [FMA:242007]
|union_of=
|xref=EFO:0003491;;FMA:242007;;TAO:0000099;;ZFA:0000099
}}
}}

Latest revision as of 18:44, 29 November 2012

Name:brain vasculature
Definition:"A vasculature that is part of a brain [Obol]." [OBOL:automatic]
Xrefs:
links:

EFO:0003491
FMA:242007
TAO:0000099

ZFA:0000099
Synonyms: "vasculature of brain" EXACT [FMA:242007]
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004121(ectoderm-derived structure),UBERON:0006876(vasculature of organ)
part_of:UBERON:0000955(brain)



Children

part of:CL:0002590 (smooth muscle cell of the brain vasculature)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005284 (brain vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.49e-79FFCP PHASE1:Hg19::chr1:201708474..201708479,+#_ffd3dea9a43079bc317ec4fd54a7d4c3p58@NAV1
3.49e-79FFCP PHASE2:Hg19::chr1:201708474..201708479,+#_ffd3dea9a43079bc317ec4fd54a7d4c3p58@NAV1
3.49e-79FFCP PHASE1:Hg19::chr1:201708485..201708494,+#_ffd3dea9a43079bc317ec4fd54a7d4c3p55@NAV1
3.49e-79FFCP PHASE2:Hg19::chr1:201708485..201708494,+#_ffd3dea9a43079bc317ec4fd54a7d4c3p55@NAV1
1.35e-59FFCP PHASE2:Hg19::chr3:146517344..146517356,+#_fa1dd048e0fb727f9e18fc7ea7bb1b1dp@chr3:146517344..146517356, +
1.35e-59FFCP PHASE1:Hg19::chr3:146517344..146517356,+#_fa1dd048e0fb727f9e18fc7ea7bb1b1dp@chr3:146517344..146517356, +
1.35e-59FFCP PHASE2:Hg19::chr8:128902571..128902583,+#_fa1dd048e0fb727f9e18fc7ea7bb1b1dp15@PVT1
1.35e-59FFCP PHASE1:Hg19::chr8:128902571..128902583,+#_fa1dd048e0fb727f9e18fc7ea7bb1b1dp15@PVT1
1.16e-57FFCP PHASE2:Hg19::chr6:72970377..72970387,+#_00332a1483dc206f79ac0b05d56000cfp20@RIMS1
1.16e-57FFCP PHASE1:Hg19::chr6:72970377..72970387,+#_00332a1483dc206f79ac0b05d56000cfp20@RIMS1
2.87e-53FFCP PHASE2:Hg19::chr8:24997361..24997368,-#_d6095e4e02363ac8ed279ebd63e20e9fp@chr8:24997361..24997368, -
2.87e-53FFCP PHASE1:Hg19::chr8:24997361..24997368,-#_d6095e4e02363ac8ed279ebd63e20e9fp@chr8:24997361..24997368, -
2.98e-45FFCP PHASE2:Hg19::chr10:105677427..105677438,-#_325c3f8c602182a540b98d6924225086p7@OBFC1
2.98e-45FFCP PHASE1:Hg19::chr10:105677427..105677438,-#_325c3f8c602182a540b98d6924225086p7@OBFC1
4.35e-40FFCP PHASE1:Hg19::chr5:158523468..158523481,-#_166df9a8c1cb0c9163c7c18542e89f48p20@EBF1
4.35e-40FFCP PHASE2:Hg19::chr5:158523468..158523481,-#_166df9a8c1cb0c9163c7c18542e89f48p20@EBF1
2.26e-36FFCP PHASE2:Hg19::chr9:132390755..132390781,+#_dae9454ae191acc128f6f0ad66d406ddp7@METTL11A
2.26e-36FFCP PHASE1:Hg19::chr9:132390755..132390781,+#_dae9454ae191acc128f6f0ad66d406ddp7@METTL11A
6.73e-36FFCP PHASE2:Hg19::chr11:60640905..60640919,+#_ee669761cb68a75bad17fa08d20cc13bp@chr11:60640905..60640919, +
6.73e-36FFCP PHASE1:Hg19::chr11:60640905..60640919,+#_ee669761cb68a75bad17fa08d20cc13bp@chr11:60640905..60640919, +
6.54e-34FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_307e449deee8f136c818cf5af157ba38p6@CCDC86
6.54e-34FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_307e449deee8f136c818cf5af157ba38p6@CCDC86
6.26e-33FFCP PHASE1:Hg19::chr12:15942091..15942108,-#_40e7887ed7b0201cdf247278bce94c43p13@EPS8
6.26e-33FFCP PHASE2:Hg19::chr12:15942091..15942108,-#_40e7887ed7b0201cdf247278bce94c43p13@EPS8
1.15e-32FFCP PHASE2:Hg19::chr1:236203048..236203055,-#_6ce8eee7a2550994f213caba8e26a4d4p@chr1:236203048..236203055, -
1.15e-32FFCP PHASE1:Hg19::chr1:236203048..236203055,-#_6ce8eee7a2550994f213caba8e26a4d4p@chr1:236203048..236203055, -
1.43e-32FFCP PHASE1:Hg19::chr14:61654271..61654282,+#_f98c3d9f191cec7c1fc0ede9a0312c1cp30@PRKCH
1.43e-32FFCP PHASE2:Hg19::chr14:61654271..61654282,+#_f98c3d9f191cec7c1fc0ede9a0312c1cp30@PRKCH
1.59e-32FFCP PHASE2:Hg19::chr6:72970389..72970411,+#_198db5c0c26483699a3b58d4d8d64903p6@RIMS1
1.59e-32FFCP PHASE1:Hg19::chr6:72970389..72970411,+#_198db5c0c26483699a3b58d4d8d64903p6@RIMS1
2.34e-32FFCP PHASE2:Hg19::chr11:60680219..60680235,+#_4d6d26b58c350bf42b13f27ab9648ce3p@chr11:60680219..60680235, +
2.34e-32FFCP PHASE1:Hg19::chr11:60680219..60680235,+#_4d6d26b58c350bf42b13f27ab9648ce3p@chr11:60680219..60680235, +
4.9e-31FFCP PHASE2:Hg19::chr6:35656232..35656237,-#_d934d9098d9112e2beca177f0e52ab66p@chr6:35656232..35656237, -
4.9e-31FFCP PHASE1:Hg19::chr6:35656232..35656237,-#_d934d9098d9112e2beca177f0e52ab66p@chr6:35656232..35656237, -
3.66e-28FFCP PHASE2:Hg19::chr6:72970412..72970435,+#_3887ec02605c2470d2e2fab42cd64389p11@RIMS1
3.66e-28FFCP PHASE1:Hg19::chr6:72970412..72970435,+#_3887ec02605c2470d2e2fab42cd64389p11@RIMS1
5.82e-28FFCP PHASE2:Hg19::chr3:147127961..147127972,+#_f8027ba052a4aa2dedd0fa1332545d36p3@AB464362
5.82e-28FFCP PHASE1:Hg19::chr3:147127961..147127972,+#_f8027ba052a4aa2dedd0fa1332545d36p3@AB464362
3.11e-27FFCP PHASE1:Hg19::chr17:75471711..75471726,+#_5db76fe47bd85abcf3ab6f9d3d696553p73@SEPT9
3.11e-27FFCP PHASE1:Hg19::chr5:149532703..149532711,+#_5db76fe47bd85abcf3ab6f9d3d696553p@chr5:149532703..149532711, +
3.11e-27FFCP PHASE2:Hg19::chr5:149532703..149532711,+#_5db76fe47bd85abcf3ab6f9d3d696553p@chr5:149532703..149532711, +
3.11e-27FFCP PHASE2:Hg19::chr17:75471711..75471726,+#_5db76fe47bd85abcf3ab6f9d3d696553p73@SEPT9
1.98e-26FFCP PHASE2:Hg19::chrX:31284990..31284993,-#_bc3b8df2e67b772d2bebe503308c9132p17@DMD
1.98e-26FFCP PHASE1:Hg19::chrX:31284990..31284993,-#_bc3b8df2e67b772d2bebe503308c9132p17@DMD
4.67e-24FFCP PHASE2:Hg19::chr3:147124547..147124563,-#_c0acf4ce17ad4513ffe314152a9af5d0p6@ZIC4
4.67e-24FFCP PHASE1:Hg19::chr3:147124547..147124563,-#_c0acf4ce17ad4513ffe314152a9af5d0p6@ZIC4
1.44e-23FFCP PHASE2:Hg19::chr3:147128048..147128057,+#_4bfca8b9fe1f0a3b1c82af3ab5fa0d8ep4@AB464362
1.44e-23FFCP PHASE1:Hg19::chr12:15941738..15941768,+#_4bfca8b9fe1f0a3b1c82af3ab5fa0d8ep@chr12:15941738..15941768, +
1.44e-23FFCP PHASE1:Hg19::chr3:147128048..147128057,+#_4bfca8b9fe1f0a3b1c82af3ab5fa0d8ep4@AB464362
1.44e-23FFCP PHASE2:Hg19::chr12:15941738..15941768,+#_4bfca8b9fe1f0a3b1c82af3ab5fa0d8ep@chr12:15941738..15941768, +
1.51e-23FFCP PHASE1:Hg19::chr2:238066183..238066194,-#_b9e12fd51d578c3249d4e86e8a71bd00p@chr2:238066183..238066194, -
1.51e-23FFCP PHASE2:Hg19::chr2:238066183..238066194,-#_b9e12fd51d578c3249d4e86e8a71bd00p@chr2:238066183..238066194, -
1.61e-23FFCP PHASE1:Hg19::chr5:149537789..149537803,-#_27aef1055d81e4cdb64e9002292a2ea1p@chr5:149537789..149537803, -
1.61e-23FFCP PHASE2:Hg19::chr5:149537789..149537803,-#_27aef1055d81e4cdb64e9002292a2ea1p@chr5:149537789..149537803, -
6.34e-23FFCP PHASE1:Hg19::chr12:279773..279812,+#_4fab3121f9bf1ef0fb0d638cee431960p@chr12:279773..279812, +
6.34e-23FFCP PHASE2:Hg19::chr12:279773..279812,+#_4fab3121f9bf1ef0fb0d638cee431960p@chr12:279773..279812, +
6.83e-23FFCP PHASE2:Hg19::chr3:147112699..147112713,-#_6b1748f7a2b2812a626ac91737d3a014p@chr3:147112699..147112713, -
6.83e-23FFCP PHASE1:Hg19::chr3:147112699..147112713,-#_6b1748f7a2b2812a626ac91737d3a014p@chr3:147112699..147112713, -
1.09e-22FFCP PHASE2:Hg19::chr3:147127489..147127503,+#_fbb302d93e1e2ed632408907a0164db9p11@ZIC1
1.09e-22FFCP PHASE1:Hg19::chr3:147127489..147127503,+#_fbb302d93e1e2ed632408907a0164db9p11@ZIC1
1.24e-22FFCP PHASE2:Hg19::chr3:147127358..147127369,+#_f403097f47d212ef3abb4bba05899951p16@ZIC1
1.24e-22FFCP PHASE1:Hg19::chr3:147127358..147127369,+#_f403097f47d212ef3abb4bba05899951p16@ZIC1
1.11e-21FFCP PHASE2:Hg19::chr3:147088197..147088208,-#_c70c00363ffd709da4789d1b6b6de9d7p@chr3:147088197..147088208, -
1.11e-21FFCP PHASE1:Hg19::chr3:147088197..147088208,-#_c70c00363ffd709da4789d1b6b6de9d7p@chr3:147088197..147088208, -
1.59e-21FFCP PHASE1:Hg19::chr17:1013251..1013277,-#_0c8ef70d56fc386ac02f13412e218cd1p@chr17:1013251..1013277, -
1.59e-21FFCP PHASE2:Hg19::chr17:1013251..1013277,-#_0c8ef70d56fc386ac02f13412e218cd1p@chr17:1013251..1013277, -
4.92e-21FFCP PHASE2:Hg19::chr14:76072096..76072107,+#_93f352a6b1296f0a0afca3005ddbbaa0p7@FLVCR2
4.92e-21FFCP PHASE1:Hg19::chr14:76072096..76072107,+#_93f352a6b1296f0a0afca3005ddbbaa0p7@FLVCR2
8.13e-21FFCP PHASE2:Hg19::chr6:94508854..94508876,-#_b16d3d3dc482ab96a85a832048a2e20ep@chr6:94508854..94508876, -
8.13e-21FFCP PHASE1:Hg19::chr6:94508854..94508876,-#_b16d3d3dc482ab96a85a832048a2e20ep@chr6:94508854..94508876, -
9.93e-21FFCP PHASE2:Hg19::chr16:65159735..65159744,-#_0b3c8a95ef8d323e9023f93e7c8f8d26p@chr16:65159735..65159744, -
9.93e-21FFCP PHASE1:Hg19::chr16:65159735..65159744,-#_0b3c8a95ef8d323e9023f93e7c8f8d26p@chr16:65159735..65159744, -
1.1e-20FFCP PHASE1:Hg19::chr3:147141109..147141123,-#_1340e549ed7593acb79bfea42444c322p@chr3:147141109..147141123, -
1.1e-20FFCP PHASE2:Hg19::chr3:147141109..147141123,-#_1340e549ed7593acb79bfea42444c322p@chr3:147141109..147141123, -
1.11e-20FFCP PHASE1:Hg19::chr3:79817162..79817175,-#_e3d60983ea90e54cc32722d7573099efp6@ROBO1
1.11e-20FFCP PHASE2:Hg19::chr3:79817162..79817175,-#_e3d60983ea90e54cc32722d7573099efp6@ROBO1
2.65e-20FFCP PHASE1:Hg19::chr5:30104120..30104173,-#_a34ef39421152b01d3c46e4d208a15eep@chr5:30104120..30104173, -
2.65e-20FFCP PHASE2:Hg19::chr5:30104120..30104173,-#_a34ef39421152b01d3c46e4d208a15eep@chr5:30104120..30104173, -
4.41e-20FFCP PHASE2:Hg19::chr3:147124697..147124729,+#_25acdd92304b26c4cbd686c327db6d58p@chr3:147124697..147124729, +
4.41e-20FFCP PHASE1:Hg19::chr3:147124697..147124729,+#_25acdd92304b26c4cbd686c327db6d58p@chr3:147124697..147124729, +
2.78e-19FFCP PHASE2:Hg19::chr3:147111317..147111328,+#_276d72bb317f1a631d3243ce620f722dp8@ZIC1
2.78e-19FFCP PHASE1:Hg19::chr3:147111317..147111328,+#_276d72bb317f1a631d3243ce620f722dp8@ZIC1
5.62e-19FFCP PHASE1:Hg19::chr4:152090554..152090566,+#_f6cf0a3c4a1569760ac9e7253fd547c8p@chr4:152090554..152090566, +
5.62e-19FFCP PHASE2:Hg19::chr4:152090554..152090566,+#_f6cf0a3c4a1569760ac9e7253fd547c8p@chr4:152090554..152090566, +
6.4e-19FFCP PHASE2:Hg19::chr11:111685389..111685410,-#_956ecee8851c9825dde09a27494f3f42p7@ALG9
6.4e-19FFCP PHASE1:Hg19::chr11:111685389..111685410,-#_956ecee8851c9825dde09a27494f3f42p7@ALG9
1.31e-18FFCP PHASE2:Hg19::chr11:60640875..60640891,+#_015c0c9abced127f3a74253044089f24p@chr11:60640875..60640891, +
1.31e-18FFCP PHASE1:Hg19::chr11:60640875..60640891,+#_015c0c9abced127f3a74253044089f24p@chr11:60640875..60640891, +
1.35e-18FFCP PHASE2:Hg19::chr17:48346424..48346435,+#_e262cc7375cf60b8a38e2cd682216371p@chr17:48346424..48346435, +
1.35e-18FFCP PHASE1:Hg19::chr17:48346424..48346435,+#_e262cc7375cf60b8a38e2cd682216371p@chr17:48346424..48346435, +
1.62e-18FFCP PHASE2:Hg19::chr11:60680190..60680212,+#_382b49c2a229169f0fbcbca623fb3383p@chr11:60680190..60680212, +
1.62e-18FFCP PHASE1:Hg19::chr11:60680190..60680212,+#_382b49c2a229169f0fbcbca623fb3383p@chr11:60680190..60680212, +
1.77e-18FFCP PHASE2:Hg19::chr11:73020686..73020697,+#_44b3ecb5c21da197d334e6b3b53038eap23@ARHGEF17
1.77e-18FFCP PHASE1:Hg19::chr11:73020686..73020697,+#_44b3ecb5c21da197d334e6b3b53038eap23@ARHGEF17
2.11e-18FFCP PHASE1:Hg19::chr3:147139152..147139163,+#_1029558b3e3f4016d04b1f32ed9b9735p15@ZIC1
2.11e-18FFCP PHASE2:Hg19::chr3:147139152..147139163,+#_1029558b3e3f4016d04b1f32ed9b9735p15@ZIC1
4.71e-18FFCP PHASE1:Hg19::chr3:147131841..147131863,+#_a4d4b48c923b706ced617bd51e2a9775p@chr3:147131841..147131863, +
4.71e-18FFCP PHASE2:Hg19::chr3:147131841..147131863,+#_a4d4b48c923b706ced617bd51e2a9775p@chr3:147131841..147131863, +
8.03e-18FFCP PHASE2:Hg19::chr3:147111285..147111298,+#_9318f09aaf4a6af9d0b8552f64048903p10@ZIC1
8.03e-18FFCP PHASE1:Hg19::chr3:147111285..147111298,+#_9318f09aaf4a6af9d0b8552f64048903p10@ZIC1

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