UBERON:0005970: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0005970 | |||
|is_a=UBERON:0001020 ;;UBERON:0007702 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=brain commissure | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of=UBERON:0000955 | |part_of=UBERON:0000955 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Revision as of 11:38, 12 September 2014
| Name: | brain commissure |
|---|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001020(nervous system commissure),UBERON:0007702(tract of brain) |
|---|---|
| part_of: | UBERON:0000955(brain) |
Children
| is a: | UBERON:0002473 (intercerebral commissure),UBERON:0005340 (dorsal telencephalic commissure) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10042-101F6 (corpus callosum, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005970 (brain commissure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr5:60927228..60927236,-#_8385cb4b6501a40588b0358c2cd8b428 | p3@BC032909, p3@BC032910 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:93827399..93827403,+#_8385cb4b6501a40588b0358c2cd8b428 | p@chr15:93827399..93827403, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:93827399..93827403,+#_8385cb4b6501a40588b0358c2cd8b428 | p@chr15:93827399..93827403, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:73689469..73689476,-#_8385cb4b6501a40588b0358c2cd8b428 | p@chr17:73689469..73689476, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr14:36462819..36462832,+#_8385cb4b6501a40588b0358c2cd8b428 | p@chr14:36462819..36462832, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr14:36462819..36462832,+#_8385cb4b6501a40588b0358c2cd8b428 | p@chr14:36462819..36462832, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:73689469..73689476,-#_8385cb4b6501a40588b0358c2cd8b428 | p@chr17:73689469..73689476, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr5:60927228..60927236,-#_8385cb4b6501a40588b0358c2cd8b428 | p3@BC032909, p3@BC032910 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr11:110248322..110248329,-#_ee16bc8792db05da5cabdcd1d6d10714 | p@chr11:110248322..110248329, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr11:110248322..110248329,-#_ee16bc8792db05da5cabdcd1d6d10714 | p@chr11:110248322..110248329, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:232548018..232548022,-#_ee16bc8792db05da5cabdcd1d6d10714 | p@chr2:232548018..232548022, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:232548018..232548022,-#_ee16bc8792db05da5cabdcd1d6d10714 | p@chr2:232548018..232548022, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr14:33926303..33926307,-#_ee16bc8792db05da5cabdcd1d6d10714 | p@chr14:33926303..33926307, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr14:33926303..33926307,-#_ee16bc8792db05da5cabdcd1d6d10714 | p@chr14:33926303..33926307, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_ee16bc8792db05da5cabdcd1d6d10714 | p41@NAV3 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:78359873..78359882,+#_ee16bc8792db05da5cabdcd1d6d10714 | p41@NAV3 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:15374659..15374696,-#_1d851805f616bdab39b7c8356cc0265d | p10@SH3BP5 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr19:35788742..35788752,+#_1d851805f616bdab39b7c8356cc0265d | p@chr19:35788742..35788752, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr19:35788742..35788752,+#_1d851805f616bdab39b7c8356cc0265d | p@chr19:35788742..35788752, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:15374659..15374696,-#_1d851805f616bdab39b7c8356cc0265d | p10@SH3BP5 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr7:124391226..124391235,-#_0cbd3d4da1199533a4b4e800b172e96c | p@chr7:124391226..124391235, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr17:72823919..72823924,-#_0cbd3d4da1199533a4b4e800b172e96c | p@chr17:72823919..72823924, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr7:124391226..124391235,-#_0cbd3d4da1199533a4b4e800b172e96c | p@chr7:124391226..124391235, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr10:73479518..73479527,-#_0cbd3d4da1199533a4b4e800b172e96c | p5@C10orf105 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr10:73479518..73479527,-#_0cbd3d4da1199533a4b4e800b172e96c | p5@C10orf105 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:78359680..78359686,+#_0cbd3d4da1199533a4b4e800b172e96c | p32@NAV3 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:78359680..78359686,+#_0cbd3d4da1199533a4b4e800b172e96c | p32@NAV3 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr17:72823919..72823924,-#_0cbd3d4da1199533a4b4e800b172e96c | p@chr17:72823919..72823924, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr8:42037488..42037504,+#_0cbd3d4da1199533a4b4e800b172e96c | p@chr8:42037488..42037504, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr8:42037488..42037504,+#_0cbd3d4da1199533a4b4e800b172e96c | p@chr8:42037488..42037504, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:163681762..163681767,+#_6c32e7408ec0f252f21cf84a1221eff5 | p@chr6:163681762..163681767, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:61043452..61043467,-#_6c32e7408ec0f252f21cf84a1221eff5 | p16@FAM13C |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:163681762..163681767,+#_6c32e7408ec0f252f21cf84a1221eff5 | p@chr6:163681762..163681767, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:61043452..61043467,-#_6c32e7408ec0f252f21cf84a1221eff5 | p16@FAM13C |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:25012236..25012245,-#_6c32e7408ec0f252f21cf84a1221eff5 | p24@ARHGAP21 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:25012236..25012245,-#_6c32e7408ec0f252f21cf84a1221eff5 | p24@ARHGAP21 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:174293011..174293022,-#_849848db2a59644223ef00cd22177674 | p@chr4:174293011..174293022, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:101522298..101522305,-#_849848db2a59644223ef00cd22177674 | p@chr8:101522298..101522305, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:645709..645712,+#_849848db2a59644223ef00cd22177674 | p15@PDE6B |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:35089799..35089804,-#_849848db2a59644223ef00cd22177674 | p20@PRLR |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:101522298..101522305,-#_849848db2a59644223ef00cd22177674 | p@chr8:101522298..101522305, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr17:40120071..40120085,+#_849848db2a59644223ef00cd22177674 | p15@CNP |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:129015806..129015815,+#_849848db2a59644223ef00cd22177674 | p@chr7:129015806..129015815, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:35089799..35089804,-#_849848db2a59644223ef00cd22177674 | p20@PRLR |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:35089832..35089839,-#_849848db2a59644223ef00cd22177674 | p26@PRLR |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:129012882..129012891,-#_849848db2a59644223ef00cd22177674 | p@chr7:129012882..129012891, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr17:40120071..40120085,+#_849848db2a59644223ef00cd22177674 | p15@CNP |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:129015806..129015815,+#_849848db2a59644223ef00cd22177674 | p@chr7:129015806..129015815, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:35089832..35089839,-#_849848db2a59644223ef00cd22177674 | p26@PRLR |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:129012882..129012891,-#_849848db2a59644223ef00cd22177674 | p@chr7:129012882..129012891, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:174293011..174293022,-#_849848db2a59644223ef00cd22177674 | p@chr4:174293011..174293022, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:99135698..99135706,+#_849848db2a59644223ef00cd22177674 | p@chr13:99135698..99135706, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:645709..645712,+#_849848db2a59644223ef00cd22177674 | p15@PDE6B |
| 4.66e-66 | FFCP PHASE1:Hg19::chr13:99135698..99135706,+#_849848db2a59644223ef00cd22177674 | p@chr13:99135698..99135706, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr14:91199850..91199861,-#_849848db2a59644223ef00cd22177674 | p@chr14:91199850..91199861, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr14:91199850..91199861,-#_849848db2a59644223ef00cd22177674 | p@chr14:91199850..91199861, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:170571770..170571782,-#_a67982f3f0df42150c6ef647f51082fd | p2@LOC154449 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:170571770..170571782,-#_a67982f3f0df42150c6ef647f51082fd | p2@LOC154449 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr19:15751984..15751994,+#_5b32831d1d6ed2dea606ea15143c46ee | p6@CYP4F3 |
| 2.42e-50 | FFCP PHASE1:Hg19::chrX:103031196..103031205,-#_5b32831d1d6ed2dea606ea15143c46ee | p@chrX:103031196..103031205, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr7:30202318..30202329,+#_5b32831d1d6ed2dea606ea15143c46ee | p@chr7:30202318..30202329, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr19:15751984..15751994,+#_5b32831d1d6ed2dea606ea15143c46ee | p6@CYP4F3 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr11:133996343..133996351,+#_5b32831d1d6ed2dea606ea15143c46ee | p8@JAM3 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr4:74005833..74005844,-#_5b32831d1d6ed2dea606ea15143c46ee | p@chr4:74005833..74005844, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr11:133996343..133996351,+#_5b32831d1d6ed2dea606ea15143c46ee | p8@JAM3 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr7:30202318..30202329,+#_5b32831d1d6ed2dea606ea15143c46ee | p@chr7:30202318..30202329, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr4:74005833..74005844,-#_5b32831d1d6ed2dea606ea15143c46ee | p@chr4:74005833..74005844, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr10:7454514..7454525,-#_5b32831d1d6ed2dea606ea15143c46ee | p@chr10:7454514..7454525, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr10:7454514..7454525,-#_5b32831d1d6ed2dea606ea15143c46ee | p@chr10:7454514..7454525, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr12:106697974..106697990,-#_5b32831d1d6ed2dea606ea15143c46ee | p31@CKAP4 |
| 2.42e-50 | FFCP PHASE2:Hg19::chrX:103031196..103031205,-#_5b32831d1d6ed2dea606ea15143c46ee | p@chrX:103031196..103031205, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr12:106697974..106697990,-#_5b32831d1d6ed2dea606ea15143c46ee | p31@CKAP4 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr6:164364681..164364684,-#_3bc01c8c4280c680944b7f0c23f86557 | p@chr6:164364681..164364684, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr3:160203278..160203289,-#_3bc01c8c4280c680944b7f0c23f86557 | p8@TRIM59 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:20927844..20927855,+#_3bc01c8c4280c680944b7f0c23f86557 | p@chr9:20927844..20927855, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:20927844..20927855,+#_3bc01c8c4280c680944b7f0c23f86557 | p@chr9:20927844..20927855, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:36726052..36726061,-#_3bc01c8c4280c680944b7f0c23f86557 | p@chr17:36726052..36726061, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:36726052..36726061,-#_3bc01c8c4280c680944b7f0c23f86557 | p@chr17:36726052..36726061, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:45922629..45922637,+#_3bc01c8c4280c680944b7f0c23f86557 | p@chr11:45922629..45922637, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:45922629..45922637,+#_3bc01c8c4280c680944b7f0c23f86557 | p@chr11:45922629..45922637, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr3:160203278..160203289,-#_3bc01c8c4280c680944b7f0c23f86557 | p8@TRIM59 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr6:164364681..164364684,-#_3bc01c8c4280c680944b7f0c23f86557 | p@chr6:164364681..164364684, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr11:67190503..67190512,+#_9bc5169ed187f669678b6b6a46625c89 | p8@CARNS1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr9:112191163..112191174,-#_9bc5169ed187f669678b6b6a46625c89 | p10@PTPN3 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:219610931..219610941,+#_9bc5169ed187f669678b6b6a46625c89 | p13@TTLL4 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr11:117585539..117585541,-#_9bc5169ed187f669678b6b6a46625c89 | p@chr11:117585539..117585541, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr9:112191163..112191174,-#_9bc5169ed187f669678b6b6a46625c89 | p10@PTPN3 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr11:67190503..67190512,+#_9bc5169ed187f669678b6b6a46625c89 | p8@CARNS1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr11:117585539..117585541,-#_9bc5169ed187f669678b6b6a46625c89 | p@chr11:117585539..117585541, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:219610931..219610941,+#_9bc5169ed187f669678b6b6a46625c89 | p13@TTLL4 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr6:133119649..133119655,-#_9bc5169ed187f669678b6b6a46625c89 | p6@C6orf192 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr12:99288459..99288464,-#_9bc5169ed187f669678b6b6a46625c89 | p38@ANKS1B |
| 6.58e-50 | FFCP PHASE2:Hg19::chr12:99288459..99288464,-#_9bc5169ed187f669678b6b6a46625c89 | p38@ANKS1B |
| 6.58e-50 | FFCP PHASE2:Hg19::chr4:7412700..7412704,+#_9bc5169ed187f669678b6b6a46625c89 | p@chr4:7412700..7412704, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr6:133119649..133119655,-#_9bc5169ed187f669678b6b6a46625c89 | p6@C6orf192 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr3:190578500..190578506,-#_9bc5169ed187f669678b6b6a46625c89 | p@chr3:190578500..190578506, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr4:7412700..7412704,+#_9bc5169ed187f669678b6b6a46625c89 | p@chr4:7412700..7412704, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr3:10706167..10706179,-#_9bc5169ed187f669678b6b6a46625c89 | p@chr3:10706167..10706179, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chrX:28605300..28605301,+#_9bc5169ed187f669678b6b6a46625c89 | p8@IL1RAPL1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr3:190578500..190578506,-#_9bc5169ed187f669678b6b6a46625c89 | p@chr3:190578500..190578506, - |
