FFCP PHASE1:Hg19::chr19:39899258..39899276,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
Line 7: | Line 7: | ||
|description=CAGE_peak_at_chr19:39899258..39899276,+ | |description=CAGE_peak_at_chr19:39899258..39899276,+ | ||
|id=chr19:39899258..39899276,+ | |id=chr19:39899258..39899276,+ | ||
|ontology_enrichment_celltype=CL: | |ontology_enrichment_celltype=CL:0002057!1.90e-28!42;CL:0000738!1.64e-27!140;CL:0000766!1.74e-27!76;CL:0000860!1.70e-26!45;CL:0000557!1.81e-22!71;CL:0002009!1.39e-21!65;CL:0000839!1.77e-20!70;CL:0002194!2.90e-20!63;CL:0000576!2.90e-20!63;CL:0000040!2.90e-20!63;CL:0000559!2.90e-20!63;CL:0002031!1.46e-19!124;CL:0002087!5.94e-19!119;CL:0000037!6.02e-17!172;CL:0000566!6.02e-17!172;CL:0002032!1.27e-15!165;CL:0000837!1.27e-15!165;CL:0000763!2.59e-15!112;CL:0000049!2.59e-15!112;CL:0000988!3.51e-15!182;CL:0000094!1.33e-07!8;CL:0002320!2.30e-07!365;CL:0002393!2.85e-07!9;CL:0002397!2.85e-07!9 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon=UBERON:0002390!9.18e-21!102;UBERON:0003061!9.18e-21!102;UBERON:0002371!1.40e-19!80;UBERON:0002193!1.48e-19!112;UBERON:0001474!4.85e-17!86;UBERON:0002405!1.99e-15!115;UBERON:0004765!9.53e-15!101;UBERON:0001434!9.53e-15!101;UBERON:0007023!7.55e-09!115;UBERON:0002204!7.66e-08!167 | ||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0.263766978228454,0.990130823680373,1.65698687863958,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,5.11373559903575,3.0706351847777,5.26374819274658,0.919421224478927,0,0,0.232401601740905,0.142169232487422,0,1.66198622559563,7.42014455639524,9.76548918221333,0.223915474239924,0.32389366601898,0,0.581592955118259,1.51150377475524,2.18325655069035,2.78914844286822,2.46700732813095,3.40677007984614,8.63077176966451,2.56160706529101,4.25668013799453,4.13694816883942,3.87290810150296,4.06279459783025,3.38836211176688,3.27487380069415,3.14612878223118,9.18251677112708,4.17207735198922,7.03270838378945,3.62836430205388,4.58766412529753,3.40979800426155,4.06292934080018,1.13477044938228,4.35975574296902,6.28121663141858,4.69334626578181,6.08128765174327,1.21079900526674,2.20966581592539,1.89877432464531,2.74631872205524,6.16552469898626,1.88692780957538,2.58355851636939,3.15371474967163,1.12507910687956,1.42506371870624,5.37075028437543,1.46131323011707,0,0.546138611262131,0,0,1.20118796110804,0,0,0.954053754535364,2.27685187643779,4.69789751496751,0.764546456250458,0,3.36305137788922,0.263384084775077,0.786839080455332,9.03924754323079,7.19605246498282,0.167186495390678,1.62961133316795,1.89379122293893,0,0.445641827540694,1.76763544484902,1.55073726208535,0.541607727530031,0.25618263945135,0,0,0,0,0.444859689486181,0.267540828089713,0,0,1.53288197440768,1.37450978193052,0.759059076058509,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,4.23374160771938,10.4301676355568,5.06885413589796,0,1.34140171940727,0,0,0,0.724232594804119,0,0,0,0,0,0.327447688744282,0,0.741568885568859,0,0,0.398873881556595,2.38490624305342,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,5.27121669744253,19.3890132074163,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0.423863802319124,0,0,0.772921620136887,0,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,0.590789906681404,0,0,0,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0.577465791044295,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,0,0.141775097242386,0.447792613514241,0,0,0,0.352193736052904,12.8543431635279,11.6737162267739,6.56460653817176,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0.710783897485092,0,0,0,0,2.43247561282381,1.00451418286425,4.21667878966063,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0,3.15249216323084,6.68445482064504,3.85029108839245,0,0,0,0,0,20.2231896465739,26.9245313283622,4.55857064779639,0.736148950314839,0,0.542530047399471,0.623912584592421,0.713715955188647,0,0.117141414992713,0.300946099727719,2.27407504055985,1.03473071292505,0,0.368738337083406,0.434418072340414,0.195801157462741,0.343143423810856,1.44737618286021,5.39285502046542,5.97674323699288,0,0,0.604780586659361,0,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0.460404944679482,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.515205058238611,0,0,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0.460511024178389,0,0,0,0.170453254832202,0.178064071293475,0.330569830721956,0,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,1.9676842561399,0,0.92947049429925,0,0,0,0,0.709522128141196,3.16661452946496,0.658589785919804,0,0.699869440489966,0.192444225451024,0,0,0.753150406214233,0.43050537267123,0,0.443430153536676,0,1.52234282769651,0,0.569647187174163,0.238231775457789,0.822724546172388,1.94541993357815,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0.222886768554957,0,0.23874448473769,0.593929361665277,0.307160702099232,0,0.281338832821026,0.111308705022906,0.16480387422676,0,2.78947183551498,1.10513566212459,0,0.102268682502155,0.492339221844278,0.933118762985422,0,0.179021174675609,0,1.7755813014648,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.331737779793674,0,0,0,0.557694977114413,1.00035336054936,0,0,0,0,2.87101043758728,0.183195186803725,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.23840590304675,2.4441205797345,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.821425535170343,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0,0.174118413160805,1.39781334593624,0,0.0967563312890851,0.0730893170861856,0,1.74580229679155,0,0.451961481561065,0,0,0,0.195551382734803,0,0.85381197895741,0,0.144090417154106,0,0.171594997861965,0,0,0.942776138467182,0,0,0.101998217636322,0,0,0,0,0,0,1.67569440763353,0.458320848023367,0.717873024576814,0.798716001995964,0,0.223171457441873,0.335917362433631,0.360299883542404,0,0.0787831823072236,0,0.0674035438541849,0,0,0.795229689809303,0,0,0,0.415440338029185,2.92466059016951,13.1546332274851,0,0.335434687599266,0.315222829196793,0.262272940674991,0.211200673038813,0.717149357331379,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,0.732761168390412,0,0.387848869084652,0.26446520348538,0.171086837884329,0,2.56289790162467,0.78602152549833,1.24271716604159,0.496166021811951,0,0,0,1.08803560673895,3.0082787282724,2.45076461410769,3.60659893780785,0,0.886068179966986,3.41673541725497,0.1251909307065,1.14681839138014,0.110929051536852,0.434674820589684,0,0,0.151649117541648,0,0,0,0,0,0,0,1.32582103692562,0.754703705257725,0,0.457680136793847,1.20984739010591,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,1.7537427795545,0.265729680626726,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0.23658523500376,0,0.352675943690684,0.3062454773532,0,0,0.638535436228605,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0.443568258651136,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,2.48105589194647,0,0,0,0,1.21393120847326,0,0.266107110487916,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0.472775363535873,0,1.02041020705668,0.471346769748006,0.280272163313789,0,0,0,0.428859265059938,0,0,0,0,0,0.17071847709395,0,0,0,0,3.38709640152743,0.22910686854405,0,0,0.447421727191169,0.098150233615243,0,0.647428837187895,1.33461648913121,0,0.971421986118279,0,0.397901550322736,0,0,0,0,0.617393264863557,0.437119121007915,0.470317296361523,1.22574160876953,0,2.35570160537934,0.594092800654172,0.4226557275834,0.169927114687817,0.187967835959707,0.45120521581504,0,0,0,0.160482733378337,0,0.458729283404541,0.286679166302903,0,0,0,2.1161073620616,0.371995018166751,1.84870251452567,0.432626562123789,0,0,0.126698501011437,0.101988829741982,0,0,0,1.21245917149183,0.267964130156178,1.65833887891756,0.310298987585686,2.13233981900981,0.476128862927481,0.258355639344024,0.124149428591716,0,0.318235791390825,1.21270313374932,4.35433495793923,0.684466602170562,0.740872583160463,0.932388670104793,0.665320713092027,0.0814032686109745,0.213454691755431,0,0.179650404213174,0,0.488965776731466,0.406896178315738,0,0.603821380773079,0 | |phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0.263766978228454,0.990130823680373,1.65698687863958,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,5.11373559903575,3.0706351847777,5.26374819274658,0.919421224478927,0,0,0.232401601740905,0.142169232487422,0,1.66198622559563,7.42014455639524,9.76548918221333,0.223915474239924,0.32389366601898,0,0.581592955118259,1.51150377475524,2.18325655069035,2.78914844286822,2.46700732813095,3.40677007984614,8.63077176966451,2.56160706529101,4.25668013799453,4.13694816883942,3.87290810150296,4.06279459783025,3.38836211176688,3.27487380069415,3.14612878223118,9.18251677112708,4.17207735198922,7.03270838378945,3.62836430205388,4.58766412529753,3.40979800426155,4.06292934080018,1.13477044938228,4.35975574296902,6.28121663141858,4.69334626578181,6.08128765174327,1.21079900526674,2.20966581592539,1.89877432464531,2.74631872205524,6.16552469898626,1.88692780957538,2.58355851636939,3.15371474967163,1.12507910687956,1.42506371870624,5.37075028437543,1.46131323011707,0,0.546138611262131,0,0,1.20118796110804,0,0,0.954053754535364,2.27685187643779,4.69789751496751,0.764546456250458,0,3.36305137788922,0.263384084775077,0.786839080455332,9.03924754323079,7.19605246498282,0.167186495390678,1.62961133316795,1.89379122293893,0,0.445641827540694,1.76763544484902,1.55073726208535,0.541607727530031,0.25618263945135,0,0,0,0,0.444859689486181,0.267540828089713,0,0,1.53288197440768,1.37450978193052,0.759059076058509,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,4.23374160771938,10.4301676355568,5.06885413589796,0,1.34140171940727,0,0,0,0.724232594804119,0,0,0,0,0,0.327447688744282,0,0.741568885568859,0,0,0.398873881556595,2.38490624305342,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,5.27121669744253,19.3890132074163,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0.423863802319124,0,0,0.772921620136887,0,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,0.590789906681404,0,0,0,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0.577465791044295,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,0,0.141775097242386,0.447792613514241,0,0,0,0.352193736052904,12.8543431635279,11.6737162267739,6.56460653817176,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0.710783897485092,0,0,0,0,2.43247561282381,1.00451418286425,4.21667878966063,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0,3.15249216323084,6.68445482064504,3.85029108839245,0,0,0,0,0,20.2231896465739,26.9245313283622,4.55857064779639,0.736148950314839,0,0.542530047399471,0.623912584592421,0.713715955188647,0,0.117141414992713,0.300946099727719,2.27407504055985,1.03473071292505,0,0.368738337083406,0.434418072340414,0.195801157462741,0.343143423810856,1.44737618286021,5.39285502046542,5.97674323699288,0,0,0.604780586659361,0,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0.460404944679482,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.515205058238611,0,0,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0.460511024178389,0,0,0,0.170453254832202,0.178064071293475,0.330569830721956,0,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,1.9676842561399,0,0.92947049429925,0,0,0,0,0.709522128141196,3.16661452946496,0.658589785919804,0,0.699869440489966,0.192444225451024,0,0,0.753150406214233,0.43050537267123,0,0.443430153536676,0,1.52234282769651,0,0.569647187174163,0.238231775457789,0.822724546172388,1.94541993357815,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0.222886768554957,0,0.23874448473769,0.593929361665277,0.307160702099232,0,0.281338832821026,0.111308705022906,0.16480387422676,0,2.78947183551498,1.10513566212459,0,0.102268682502155,0.492339221844278,0.933118762985422,0,0.179021174675609,0,1.7755813014648,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.331737779793674,0,0,0,0.557694977114413,1.00035336054936,0,0,0,0,2.87101043758728,0.183195186803725,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.23840590304675,2.4441205797345,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.821425535170343,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0,0.174118413160805,1.39781334593624,0,0.0967563312890851,0.0730893170861856,0,1.74580229679155,0,0.451961481561065,0,0,0,0.195551382734803,0,0.85381197895741,0,0.144090417154106,0,0.171594997861965,0,0,0.942776138467182,0,0,0.101998217636322,0,0,0,0,0,0,1.67569440763353,0.458320848023367,0.717873024576814,0.798716001995964,0,0.223171457441873,0.335917362433631,0.360299883542404,0,0.0787831823072236,0,0.0674035438541849,0,0,0.795229689809303,0,0,0,0.415440338029185,2.92466059016951,13.1546332274851,0,0.335434687599266,0.315222829196793,0.262272940674991,0.211200673038813,0.717149357331379,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,0.732761168390412,0,0.387848869084652,0.26446520348538,0.171086837884329,0,2.56289790162467,0.78602152549833,1.24271716604159,0.496166021811951,0,0,0,1.08803560673895,3.0082787282724,2.45076461410769,3.60659893780785,0,0.886068179966986,3.41673541725497,0.1251909307065,1.14681839138014,0.110929051536852,0.434674820589684,0,0,0.151649117541648,0,0,0,0,0,0,0,1.32582103692562,0.754703705257725,0,0.457680136793847,1.20984739010591,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,1.7537427795545,0.265729680626726,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0.23658523500376,0,0.352675943690684,0.3062454773532,0,0,0.638535436228605,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0.443568258651136,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,2.48105589194647,0,0,0,0,1.21393120847326,0,0.266107110487916,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0.472775363535873,0,1.02041020705668,0.471346769748006,0.280272163313789,0,0,0,0.428859265059938,0,0,0,0,0,0.17071847709395,0,0,0,0,3.38709640152743,0.22910686854405,0,0,0.447421727191169,0.098150233615243,0,0.647428837187895,1.33461648913121,0,0.971421986118279,0,0.397901550322736,0,0,0,0,0.617393264863557,0.437119121007915,0.470317296361523,1.22574160876953,0,2.35570160537934,0.594092800654172,0.4226557275834,0.169927114687817,0.187967835959707,0.45120521581504,0,0,0,0.160482733378337,0,0.458729283404541,0.286679166302903,0,0,0,2.1161073620616,0.371995018166751,1.84870251452567,0.432626562123789,0,0,0.126698501011437,0.101988829741982,0,0,0,1.21245917149183,0.267964130156178,1.65833887891756,0.310298987585686,2.13233981900981,0.476128862927481,0.258355639344024,0.124149428591716,0,0.318235791390825,1.21270313374932,4.35433495793923,0.684466602170562,0.740872583160463,0.932388670104793,0.665320713092027,0.0814032686109745,0.213454691755431,0,0.179650404213174,0,0.488965776731466,0.406896178315738,0,0.603821380773079,0 | ||
|short_description=p@chr19:39899258..39899276,+ | |short_description=p@chr19:39899258..39899276,+ | ||
}} | }} |
Revision as of 03:49, 4 August 2012
Short description: | p@chr19:39899258..39899276, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:39899258..39899276, + |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.