FFCP PHASE1:Hg19::chr6:22146958..22146992,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
Line 8: | Line 8: | ||
|id=chr6:22146958..22146992,+ | |id=chr6:22146958..22146992,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.23e-19;82!UBERON:0010122;3.27e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.21e-71!57;UBERON:0005068!1.21e-71!57;UBERON:0006241!1.21e-71!57;UBERON:0007135!1.21e-71!57;UBERON:0000073!8.21e-62!94;UBERON:0001016!8.21e-62!94;UBERON:0001017!6.16e-61!82;UBERON:0002616!9.91e-60!59;UBERON:0005743!1.11e-59!86;UBERON:0002780!1.32e-59!41;UBERON:0001890!1.32e-59!41;UBERON:0006240!1.32e-59!41;UBERON:0000955!2.82e-58!69;UBERON:0006238!2.82e-58!69;UBERON:0003080!6.12e-58!42;UBERON:0002020!4.75e-54!34;UBERON:0003528!4.75e-54!34;UBERON:0001893!7.56e-54!34;UBERON:0002791!8.74e-52!33;UBERON:0003075!2.70e-51!86;UBERON:0007284!2.70e-51!86;UBERON:0002346!1.85e-50!90;UBERON:0001869!1.89e-50!32;UBERON:0007023!3.76e-42!115;UBERON:0002619!8.03e-39!22;UBERON:0003056!1.15e-38!61;UBERON:0000956!1.54e-36!25;UBERON:0000203!1.54e-36!25;UBERON:0000924!4.75e-35!173;UBERON:0006601!4.75e-35!173;UBERON:0001950!5.96e-35!20;UBERON:0004121!6.26e-35!169;UBERON:0000033!4.04e-34!123;UBERON:0000153!2.64e-33!129;UBERON:0007811!2.64e-33!129;UBERON:0002420!4.98e-19!9;UBERON:0007245!4.98e-19!9;UBERON:0010009!4.98e-19!9;UBERON:0010011!4.98e-19!9;UBERON:0000454!4.98e-19!9;UBERON:0002308!5.41e-19!9;UBERON:0000125!5.41e-19!9;UBERON:0000025!2.59e-16!194;UBERON:0009663!3.93e-15!7;UBERON:0003076!1.64e-14!15;UBERON:0003057!1.64e-14!15;UBERON:0000200!4.46e-14!6;UBERON:0004111!8.55e-14!241;UBERON:0000483!3.61e-13!309;UBERON:0000119!7.05e-13!312;UBERON:0002298!1.86e-12!8;UBERON:0004732!1.06e-11!13;UBERON:0001872!1.76e-11!5;UBERON:0000349!2.51e-11!5;UBERON:0002021!2.97e-11!5;UBERON:0000477!4.11e-11!286;UBERON:0000475!1.04e-10!365;UBERON:0004733!4.75e-10!12;UBERON:0002028!4.75e-10!12;UBERON:0007277!4.75e-10!12;UBERON:0001871!4.91e-10!7;UBERON:0000369!6.04e-10!4;UBERON:0002435!6.04e-10!4;UBERON:0000204!6.04e-10!4;UBERON:0010082!6.04e-10!4;UBERON:0000064!1.33e-08!219;UBERON:0005383!4.94e-08!3;UBERON:0005382!4.94e-08!3;UBERON:0002771!7.36e-08!3;UBERON:0001894!1.84e-07!7;UBERON:0006222!1.84e-07!7;UBERON:0000988!1.94e-07!3;UBERON:0006331!3.64e-07!3;UBERON:0001896!5.17e-07!3;UBERON:0005290!5.17e-07!3;UBERON:0010096!5.17e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.21e-71!57;UBERON:0005068!1.21e-71!57;UBERON:0006241!1.21e-71!57;UBERON:0007135!1.21e-71!57;UBERON:0000073!8.21e-62!94;UBERON:0001016!8.21e-62!94;UBERON:0001017!6.16e-61!82;UBERON:0002616!9.91e-60!59;UBERON:0005743!1.11e-59!86;UBERON:0002780!1.32e-59!41;UBERON:0001890!1.32e-59!41;UBERON:0006240!1.32e-59!41;UBERON:0000955!2.82e-58!69;UBERON:0006238!2.82e-58!69;UBERON:0003080!6.12e-58!42;UBERON:0002020!4.75e-54!34;UBERON:0003528!4.75e-54!34;UBERON:0001893!7.56e-54!34;UBERON:0002791!8.74e-52!33;UBERON:0003075!2.70e-51!86;UBERON:0007284!2.70e-51!86;UBERON:0002346!1.85e-50!90;UBERON:0001869!1.89e-50!32;UBERON:0007023!3.76e-42!115;UBERON:0002619!8.03e-39!22;UBERON:0003056!1.15e-38!61;UBERON:0000956!1.54e-36!25;UBERON:0000203!1.54e-36!25;UBERON:0000924!4.75e-35!173;UBERON:0006601!4.75e-35!173;UBERON:0001950!5.96e-35!20;UBERON:0004121!6.26e-35!169;UBERON:0000033!4.04e-34!123;UBERON:0000153!2.64e-33!129;UBERON:0007811!2.64e-33!129;UBERON:0002420!4.98e-19!9;UBERON:0007245!4.98e-19!9;UBERON:0010009!4.98e-19!9;UBERON:0010011!4.98e-19!9;UBERON:0000454!4.98e-19!9;UBERON:0002308!5.41e-19!9;UBERON:0000125!5.41e-19!9;UBERON:0000025!2.59e-16!194;UBERON:0009663!3.93e-15!7;UBERON:0003076!1.64e-14!15;UBERON:0003057!1.64e-14!15;UBERON:0000200!4.46e-14!6;UBERON:0004111!8.55e-14!241;UBERON:0000483!3.61e-13!309;UBERON:0000119!7.05e-13!312;UBERON:0002298!1.86e-12!8;UBERON:0004732!1.06e-11!13;UBERON:0001872!1.76e-11!5;UBERON:0000349!2.51e-11!5;UBERON:0002021!2.97e-11!5;UBERON:0000477!4.11e-11!286;UBERON:0000475!1.04e-10!365;UBERON:0004733!4.75e-10!12;UBERON:0002028!4.75e-10!12;UBERON:0007277!4.75e-10!12;UBERON:0001871!4.91e-10!7;UBERON:0000369!6.04e-10!4;UBERON:0002435!6.04e-10!4;UBERON:0000204!6.04e-10!4;UBERON:0010082!6.04e-10!4;UBERON:0000064!1.33e-08!219;UBERON:0005383!4.94e-08!3;UBERON:0005382!4.94e-08!3;UBERON:0002771!7.36e-08!3;UBERON:0001894!1.84e-07!7;UBERON:0006222!1.84e-07!7;UBERON:0000988!1.94e-07!3;UBERON:0006331!3.64e-07!3;UBERON:0001896!5.17e-07!3;UBERON:0005290!5.17e-07!3;UBERON:0010096!5.17e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.54e-74;32!UBERON:0003528;3.41e-72;34!UBERON:0002020;3.41e-72;34!UBERON:0002791;5.95e-69;32!UBERON:0001893;1.47e-68;34!UBERON:0002619;2.56e-64;22!UBERON:0002780;2.26e-59;41!UBERON:0001890;2.26e-59;41!UBERON:0001950;1.02e-56;20!UBERON:0000956;2.38e-56;25!UBERON:0000203;2.38e-56;25!UBERON:0000073;3.73e-49;53!UBERON:0002616;3.73e-49;53!UBERON:0000955;1.25e-34;68!UBERON:0001017;2.62e-32;75!UBERON:0002420;1.95e-29;9!UBERON:0007245;1.95e-29;9!UBERON:0010009;1.95e-29;9!UBERON:0010011;1.95e-29;9!UBERON:0000454;1.95e-29;9!UBERON:0000125;2.54e-29;9!UBERON:0002308;2.54e-29;9!UBERON:0000200;1.02e-26;6!UBERON:0002298;5.26e-24;6!UBERON:0001016;2.69e-22;83!UBERON:0009663;9.48e-22;7!UBERON:0000349;5.10e-21;5!UBERON:0000369;2.50e-18;4!UBERON:0002435;2.50e-18;4!UBERON:0000204;2.50e-18;4!UBERON:0001871;1.36e-15;6!UBERON:0004732;1.43e-14;13!UBERON:0005383;1.62e-14;3!UBERON:0005382;1.62e-14;3!UBERON:0001872;1.77e-14;5!UBERON:0007023;2.48e-14;114!UBERON:0002021;2.58e-14;5!UBERON:0001870;4.09e-14;3!UBERON:0000988;3.01e-13;3!UBERON:0001896;1.62e-12;3!UBERON:0005290;1.62e-12;3!UBERON:0004733;1.01e-11;12!UBERON:0002028;1.01e-11;12!UBERON:0001873;3.27e-10;2!UBERON:0002771;3.73e-10;2!UBERON:0002702;3.99e-10;2!UBERON:0002784;1.10e-09;4!UBERON:0001876;1.54e-09;2!UBERON:0001894;1.59e-09;7!UBERON:0002148;2.08e-09;2!UBERON:0006331;2.08e-09;2!UBERON:0009662;2.08e-09;2!UBERON:0001954;2.22e-09;2!UBERON:0003022;2.22e-09;2!UBERON:0002421;2.22e-09;2!UBERON:0002600;2.22e-09;2!UBERON:0011216;4.65e-09;132!UBERON:0001897;6.57e-09;2!UBERON:0001875;6.57e-09;2!UBERON:0006514;6.57e-09;2!UBERON:0010225;6.57e-09;2!UBERON:0010314;4.69e-08;132!UBERON:0004121;2.86e-07;165 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,1.52054421143703,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,3.51673541026282,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,3.87733098438087,2.13366625772258,0,0,0,0,0,0,0,0,0,0.347249989866585,5.31444831488303,7.35638275614988,0,0.331737779793674,0.591095237907095,4.16832254592548,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,1.60515529459758,2.57690890297873,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54540457352921,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,1.80126086612937,1.09524303113594,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,2.99647493445466,0,0,0.415440338029185,0,0,3.64497339948148,0,0,0.104909176269996,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,4.26633755993117,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,7.08854543973589,6.71144456960797,4.13130071331449,1.72022758707021,1.22021956690538,1.42821726765182,0,0,0.303298235083296,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11556213761404,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0.431299245586727,0,0.436838552768056,0,0.425149840203366,0,0,0,0,0,0,0,2.76185667914776,9.91876034279095,6.2257205032289,1.43581454968528,0.504143392443436,3.8728061379962,4.35984243205998,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25486783095886,5.46754669029693,6.82066428453907,2.98054307911362,0.546974809018219,0,0,0,0,0.535701835878287,2.01770233331294,0,0,0,0,0,2.58284985311961,4.47254860227374,0,0,0,7.54154831596809,0,0.913158720509496,0,0,0.214429632529969,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.237840181555137,0.11294608203896,0,0,0.154348316215889,0,0,0,0.471353094203252,0.981542335574726,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0.573358332605805,0.157771562193185,3.12760854878208,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,1.65492793379032,0,0.476128862927481,0,0,0,0,0.202117188958219,0.217716747896961,1.71116650542641,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,1.52054421143703,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,3.51673541026282,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,3.87733098438087,2.13366625772258,0,0,0,0,0,0,0,0,0,0.347249989866585,5.31444831488303,7.35638275614988,0,0.331737779793674,0.591095237907095,4.16832254592548,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,1.60515529459758,2.57690890297873,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54540457352921,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,1.80126086612937,1.09524303113594,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,2.99647493445466,0,0,0.415440338029185,0,0,3.64497339948148,0,0,0.104909176269996,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,4.26633755993117,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,7.08854543973589,6.71144456960797,4.13130071331449,1.72022758707021,1.22021956690538,1.42821726765182,0,0,0.303298235083296,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11556213761404,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0.431299245586727,0,0.436838552768056,0,0.425149840203366,0,0,0,0,0,0,0,2.76185667914776,9.91876034279095,6.2257205032289,1.43581454968528,0.504143392443436,3.8728061379962,4.35984243205998,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25486783095886,5.46754669029693,6.82066428453907,2.98054307911362,0.546974809018219,0,0,0,0,0.535701835878287,2.01770233331294,0,0,0,0,0,2.58284985311961,4.47254860227374,0,0,0,7.54154831596809,0,0.913158720509496,0,0,0.214429632529969,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.237840181555137,0.11294608203896,0,0,0.154348316215889,0,0,0,0.471353094203252,0.981542335574726,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0.573358332605805,0.157771562193185,3.12760854878208,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,1.65492793379032,0,0.476128862927481,0,0,0,0,0.202117188958219,0.217716747896961,1.71116650542641,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p3@LINC00340 | |short_description=p3@LINC00340 | ||
}} | }} |
Revision as of 20:22, 7 August 2012
Short description: | p3@LINC00340 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LINC00340_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 75bp_to_uc003ndn.2_5end |
EntrezGene: | LINC00340 |
HGNC: | 28245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.