FFCP PHASE1:Hg19::chr6:75828867..75828885,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000057!1.03e-10!75;CL:0002620!2.94e-10!23 | |ontology_enrichment_celltype=CL:0000057!1.03e-10!75;CL:0002620!2.94e-10!23 | ||
|ontology_enrichment_celltype_v019=CL:0002563;9.05e-18;4!CL:0002334;6.19e-16;12!CL:0002537;1.20e-14;5!CL:0002580;2.03e-11;3!CL:0002579;3.78e-11;3!CL:0000228;5.51e-09;1!CL:0002581;5.51e-09;1!CL:0002372;5.51e-09;1!CL:0002616;5.51e-09;1!CL:0002620;3.75e-08;23 | |ontology_enrichment_celltype_v019=CL:0002563;9.05e-18;4!CL:0002334;6.19e-16;12!CL:0002537;1.20e-14;5!CL:0002580;2.03e-11;3!CL:0002579;3.78e-11;3!CL:0000228;5.51e-09;1!CL:0002581;5.51e-09;1!CL:0002372;5.51e-09;1!CL:0002616;5.51e-09;1!CL:0002620;3.75e-08;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.36e-18,4;CL:0002334,4.76e-16,12;CL:0002537,6.59e-15,5;CL:0002580,1.57e-11,3;CL:0002579,3.60e-11,3;CL:0000057,2.99e-10,76;CL:0002616,3.05e-09,1;CL:0002581,4.54e-09,1;CL:0000228,4.91e-09,1;CL:0002372,4.91e-09,1;CL:0002620,5.18e-08,23 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.12e-09;1 | |ontology_enrichment_development_v019=UBERON:0000358;2.12e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.46e-14;5!DOID:450;2.46e-14;5!DOID:66;2.46e-14;5!DOID:423;2.46e-14;5!DOID:0080000;2.46e-14;5!DOID:11722;2.46e-14;5 | |ontology_enrichment_disease_v019=DOID:17;2.46e-14;5!DOID:450;2.46e-14;5!DOID:66;2.46e-14;5!DOID:423;2.46e-14;5!DOID:0080000;2.46e-14;5!DOID:11722;2.46e-14;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.37e-14,5;DOID:450,4.37e-14,5;DOID:66,4.37e-14,5;DOID:423,4.37e-14,5;DOID:0080000,4.37e-14,5;DOID:11722,4.37e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!6.13e-10!6;UBERON:0002358!6.13e-10!6;UBERON:0003684!6.13e-10!6;UBERON:0001178!6.13e-10!6;UBERON:0001737!3.21e-09!9;UBERON:0004923!4.51e-07!57 | |ontology_enrichment_uberon=UBERON:0003688!6.13e-10!6;UBERON:0002358!6.13e-10!6;UBERON:0003684!6.13e-10!6;UBERON:0001178!6.13e-10!6;UBERON:0001737!3.21e-09!9;UBERON:0004923!4.51e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;9.05e-18;4!UBERON:0001262;9.05e-18;4!UBERON:0004786;9.05e-18;4!UBERON:0004808;9.05e-18;4!UBERON:0001277;9.05e-18;4!UBERON:0005406;2.98e-16;2!UBERON:0003688;2.80e-12;6!UBERON:0002358;2.80e-12;6!UBERON:0003684;2.80e-12;6!UBERON:0001178;2.80e-12;6!UBERON:0000305;1.30e-10;7!UBERON:0000485;2.15e-10;7!UBERON:0003929;2.15e-10;7!UBERON:0003350;3.70e-09;8!UBERON:0004457;2.37e-08;9!UBERON:0000042;2.37e-08;9!UBERON:0000310;1.18e-07;10!UBERON:0005631;1.43e-07;10!UBERON:0000158;1.43e-07;10!UBERON:0001443;5.35e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001242;9.05e-18;4!UBERON:0001262;9.05e-18;4!UBERON:0004786;9.05e-18;4!UBERON:0004808;9.05e-18;4!UBERON:0001277;9.05e-18;4!UBERON:0005406;2.98e-16;2!UBERON:0003688;2.80e-12;6!UBERON:0002358;2.80e-12;6!UBERON:0003684;2.80e-12;6!UBERON:0001178;2.80e-12;6!UBERON:0000305;1.30e-10;7!UBERON:0000485;2.15e-10;7!UBERON:0003929;2.15e-10;7!UBERON:0003350;3.70e-09;8!UBERON:0004457;2.37e-08;9!UBERON:0000042;2.37e-08;9!UBERON:0000310;1.18e-07;10!UBERON:0005631;1.43e-07;10!UBERON:0000158;1.43e-07;10!UBERON:0001443;5.35e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,9.36e-18,4;UBERON:0001262,9.36e-18,4;UBERON:0004786,9.36e-18,4;UBERON:0004808,9.36e-18,4;UBERON:0001277,9.36e-18,4;UBERON:0005406,1.37e-16,2;UBERON:0003688,2.70e-12,6;UBERON:0002358,2.70e-12,6;UBERON:0003684,2.70e-12,6;UBERON:0001178,2.70e-12,6;UBERON:0000305,8.47e-11,7;UBERON:0004871,1.65e-09,8;UBERON:0003350,3.76e-09,8;UBERON:0000485,3.46e-08,9;UBERON:0004923,3.50e-08,66;UBERON:0000310,1.07e-07,10;UBERON:0001443,4.89e-07,11 | |||
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| ||
|short_description=p10@COL12A1 | |short_description=p10@COL12A1 | ||
}} | }} |
Revision as of 03:59, 16 November 2012
Short description: | p10@COL12A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_COL12A1_5end |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | -93bp_to_ENST00000493109_5end |
EntrezGene: | COL12A1 |
HGNC: | 2188 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.36e-18 | 4 |
preadipocyte | 4.76e-16 | 12 |
amnion mesenchymal stem cell | 6.59e-15 | 5 |
preadipocyte of the breast | 1.57e-11 | 3 |
omentum preadipocyte | 3.60e-11 | 3 |
fibroblast | 2.99e-10 | 76 |
perirenal adipocyte cell | 3.05e-09 | 1 |
perirenal preadipocyte | 4.54e-09 | 1 |
multinucleate cell | 4.91e-09 | 1 |
myotube | 4.91e-09 | 1 |
skin fibroblast | 5.18e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 9.36e-18 | 4 |
wall of intestine | 9.36e-18 | 4 |
gastrointestinal system mucosa | 9.36e-18 | 4 |
gastrointestinal system epithelium | 9.36e-18 | 4 |
intestinal epithelium | 9.36e-18 | 4 |
perirenal fat | 1.37e-16 | 2 |
omentum | 2.70e-12 | 6 |
peritoneum | 2.70e-12 | 6 |
abdominal cavity | 2.70e-12 | 6 |
visceral peritoneum | 2.70e-12 | 6 |
amnion | 8.47e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.65e-09 | 8 |
epithelium of mucosa | 3.76e-09 | 8 |
simple columnar epithelium | 3.46e-08 | 9 |
organ component layer | 3.50e-08 | 66 |
breast | 1.07e-07 | 10 |
chest | 4.89e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.37e-14 | 5 |
myotonic disease | 4.37e-14 | 5 |
muscle tissue disease | 4.37e-14 | 5 |
myopathy | 4.37e-14 | 5 |
muscular disease | 4.37e-14 | 5 |
myotonic dystrophy | 4.37e-14 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.