FFCP PHASE1:Hg19::chr1:53174050..53174086,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000077!3.79e-10!19;CL:0000039!1.38e-07!7;CL:0000586!1.38e-07!7;CL:0002541!3.88e-07!3 | |ontology_enrichment_celltype=CL:0000077!3.79e-10!19;CL:0000039!1.38e-07!7;CL:0000586!1.38e-07!7;CL:0002541!3.88e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.32e-16;7!CL:0000586;1.32e-16;7!CL:0002601;1.33e-13;1!CL:0002563;1.72e-13;4!CL:0002253;1.02e-07;2!CL:0002097;1.16e-07;2 | |ontology_enrichment_celltype_v019=CL:0000039;1.32e-16;7!CL:0000586;1.32e-16;7!CL:0002601;1.33e-13;1!CL:0002563;1.72e-13;4!CL:0002253;1.02e-07;2!CL:0002097;1.16e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.51e-16,7;CL:0000586,1.51e-16,7;CL:0002601,1.10e-13,1;CL:0002563,2.21e-13,4;CL:0002253,1.05e-07,2;CL:0002097,1.12e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.32e-08!14 | |ontology_enrichment_disease=DOID:2394!1.32e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1799;4.83e-14;1!DOID:10165;4.83e-14;1!DOID:1798;4.83e-14;1!DOID:170;2.07e-09;6 | |ontology_enrichment_disease_v019=DOID:1799;4.83e-14;1!DOID:10165;4.83e-14;1!DOID:1798;4.83e-14;1!DOID:170;2.07e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,5.15e-14,1;DOID:10165,5.15e-14,1;DOID:1798,5.15e-14,1;DOID:170,2.07e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0005156!7.22e-09!59;UBERON:0000990!7.22e-09!59;UBERON:0000476!3.88e-07!3;UBERON:0000920!3.88e-07!3 | |ontology_enrichment_uberon=UBERON:0005156!7.22e-09!59;UBERON:0000990!7.22e-09!59;UBERON:0000476!3.88e-07!3;UBERON:0000920!3.88e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.72e-13;4!UBERON:0001262;1.72e-13;4!UBERON:0004786;1.72e-13;4!UBERON:0004808;1.72e-13;4!UBERON:0001277;1.72e-13;4!UBERON:0000160;2.80e-11;17!UBERON:0005409;7.06e-09;22!UBERON:0000485;4.27e-08;7!UBERON:0003929;4.27e-08;7!UBERON:0003350;3.45e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0001242;1.72e-13;4!UBERON:0001262;1.72e-13;4!UBERON:0004786;1.72e-13;4!UBERON:0004808;1.72e-13;4!UBERON:0001277;1.72e-13;4!UBERON:0000160;2.80e-11;17!UBERON:0005409;7.06e-09;22!UBERON:0000485;4.27e-08;7!UBERON:0003929;4.27e-08;7!UBERON:0003350;3.45e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.21e-13,4;UBERON:0001262,2.21e-13,4;UBERON:0004786,2.21e-13,4;UBERON:0004808,2.21e-13,4;UBERON:0001277,2.21e-13,4;UBERON:0000160,3.38e-11,17;UBERON:0005409,8.04e-08,25;UBERON:0003350,3.90e-07,8 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0.292311015483596,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0,0,0,2.41151501647669,0,5.39854152383108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0.702848489956279,0,0,0,0,0.184369168541703,0.60818530127658,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,1.81289174387433,0,0,0.34444334449382,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,1.77380532035299,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0.71623345421307,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,2.07507513949254,1.34636466614658,2.06430006651815,0.31900115973192,0.183195186803725,4.26427820814908,0,0,0,0,0,0,0,0,0,0,4.24059214301822,0,0.995261931078505,1.41532103205343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0.63718706865481,0,0.155262956876259,0,0.265841714557995,0,1.50257608997218,1.90402606084398,0.406870733204662,0.181848659202559,0.751873899297419,0,0,0.400027764663154,0,0,0,3.46715694733146,0.857766365499703,0,0.453411851024545,0,0,0.895444205407437,0,0,0.353378291891762,0.771656153083659,0.506827321959218,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40478702825849,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15761237161917,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.378893491091197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855690109280065,0,0,0.201273793591026,0 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|phase1_expression=0.726713517082227,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0.292311015483596,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0,0,0,2.41151501647669,0,5.39854152383108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0.702848489956279,0,0,0,0,0.184369168541703,0.60818530127658,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,1.81289174387433,0,0,0.34444334449382,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,1.77380532035299,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0.71623345421307,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,2.07507513949254,1.34636466614658,2.06430006651815,0.31900115973192,0.183195186803725,4.26427820814908,0,0,0,0,0,0,0,0,0,0,4.24059214301822,0,0.995261931078505,1.41532103205343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0.63718706865481,0,0.155262956876259,0,0.265841714557995,0,1.50257608997218,1.90402606084398,0.406870733204662,0.181848659202559,0.751873899297419,0,0,0.400027764663154,0,0,0,3.46715694733146,0.857766365499703,0,0.453411851024545,0,0,0.895444205407437,0,0,0.353378291891762,0.771656153083659,0.506827321959218,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40478702825849,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15761237161917,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.378893491091197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855690109280065,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:53174050..53174086,- | |short_description=p@chr1:53174050..53174086,- | ||
}} | }} |
Revision as of 16:26, 17 November 2012
Short description: | p@chr1:53174050..53174086, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:53174050..53174086, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.51e-16 | 7 |
germ cell | 1.51e-16 | 7 |
uterine smooth muscle cell | 1.10e-13 | 1 |
intestinal epithelial cell | 2.21e-13 | 4 |
epithelial cell of large intestine | 1.05e-07 | 2 |
cortical cell of adrenal gland | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.21e-13 | 4 |
wall of intestine | 2.21e-13 | 4 |
gastrointestinal system mucosa | 2.21e-13 | 4 |
gastrointestinal system epithelium | 2.21e-13 | 4 |
intestinal epithelium | 2.21e-13 | 4 |
intestine | 3.38e-11 | 17 |
gastrointestinal system | 8.04e-08 | 25 |
epithelium of mucosa | 3.90e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.15e-14 | 1 |
endocrine pancreas cancer | 5.15e-14 | 1 |
pancreatic endocrine carcinoma | 5.15e-14 | 1 |
endocrine gland cancer | 2.07e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.