FFCP PHASE1:Hg19::chr19:49004794..49004810,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!5.74e-23!254;CL:0000223!1.41e-11!59;CL:0002076!7.16e-11!43;CL:0000039!8.93e-09!7;CL:0000586!8.93e-09!7;CL:0002159!2.10e-07!13 | |ontology_enrichment_celltype=CL:0000066!5.74e-23!254;CL:0000223!1.41e-11!59;CL:0002076!7.16e-11!43;CL:0000039!8.93e-09!7;CL:0000586!8.93e-09!7;CL:0002159!2.10e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.92e-16;7!CL:0000586;2.92e-16;7!CL:0002076;3.69e-09;42!CL:0000575;1.45e-07;2 | |ontology_enrichment_celltype_v019=CL:0000039;2.92e-16;7!CL:0000586;2.92e-16;7!CL:0002076;3.69e-09;42!CL:0000575;1.45e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.77e-16,7;CL:0000586,2.77e-16,7;CL:0000066,2.72e-14,253;CL:0002076,3.64e-10,42;CL:0000223,3.49e-09,58;CL:0000575,2.63e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!4.50e-28!106;DOID:0050687!2.07e-20!143;DOID:1749!2.15e-09!14;DOID:162!5.00e-09!235;DOID:14566!2.05e-08!239;DOID:299!3.48e-07!25 | |ontology_enrichment_disease=DOID:305!4.50e-28!106;DOID:0050687!2.07e-20!143;DOID:1749!2.15e-09!14;DOID:162!5.00e-09!235;DOID:14566!2.05e-08!239;DOID:299!3.48e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;3.08e-11;25!DOID:4468;3.49e-07;2 | |ontology_enrichment_disease_v019=DOID:299;3.08e-11;25!DOID:4468;3.49e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.80e-14,106;DOID:0050687,3.90e-13,143;DOID:299,3.28e-11,25;DOID:162,9.72e-08,235;DOID:14566,2.03e-07,239;DOID:4468,5.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.93e-11!169;UBERON:0000925!8.93e-11!169;UBERON:0006595!8.93e-11!169;UBERON:0001004!5.55e-10!72;UBERON:0000065!1.77e-09!53;UBERON:0001007!1.71e-08!155;UBERON:0001555!1.71e-08!155;UBERON:0007026!1.71e-08!155;UBERON:0005911!4.78e-08!82;UBERON:0008947!7.16e-08!38;UBERON:0003258!7.16e-08!38;UBERON:0004921!2.39e-07!129;UBERON:0004185!2.39e-07!129;UBERON:0005153!3.24e-07!37;UBERON:0000077!4.80e-07!130;UBERON:0005177!9.13e-07!107 | |ontology_enrichment_uberon=UBERON:0004119!8.93e-11!169;UBERON:0000925!8.93e-11!169;UBERON:0006595!8.93e-11!169;UBERON:0001004!5.55e-10!72;UBERON:0000065!1.77e-09!53;UBERON:0001007!1.71e-08!155;UBERON:0001555!1.71e-08!155;UBERON:0007026!1.71e-08!155;UBERON:0005911!4.78e-08!82;UBERON:0008947!7.16e-08!38;UBERON:0003258!7.16e-08!38;UBERON:0004921!2.39e-07!129;UBERON:0004185!2.39e-07!129;UBERON:0005153!3.24e-07!37;UBERON:0000077!4.80e-07!130;UBERON:0005177!9.13e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0003101;3.42e-08;22!UBERON:0000079;3.42e-08;22!UBERON:0003135;5.09e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0003101;3.42e-08;22!UBERON:0000079;3.42e-08;22!UBERON:0003135;5.09e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,3.65e-08,22;UBERON:0000079,3.65e-08,22;UBERON:0003135,6.38e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.79120467188971,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,2.18577172975525,1.11235332835329,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.545492241181669,0.286804595389004,1.46368447355514,0.927708378250397,0.464775771478074,1.14027160516907,1.7662459561294,2.18986415445498,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0.474541238222193,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,0,3.07471096357784,0,4.17051084552777,1.1240175325762,0.301586917234893,0.462942225792648,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0.93733833986777,0.839910640994298,0.708875486211932,0,0,0,0,0.704387472105808,0.621984346622316,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14234568938218,1.80455823272956,0.644566922551274,0,0,0,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,1.53135254993501,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,1.08890984861323,0.376575203107117,1.29151611801369,0,0.443430153536676,0.918893600827838,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0.747768497892312,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.874599999961957,0.724999575434793,0.568967241427498,1.77977555204936,0.709163045303809,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0.762569244632931,0.83654246567162,0.230850775511391,0,3.91958637459702,1.97466817701499,2.82483166997221,0.638002319463839,0.366390373607449,2.13213910407454,0,0,0,1.57916962432026,1.9606253431774,1.67821586975843,0,0.158936578980379,1.26598838716816,1.14262965711403,2.96841450011276,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,0,0.782658475728359,0,1.57833761139756,0,0.30607276163049,0,0.300646838828985,0,0,0,0,0,2.84609546029793,0,2.08271686002157,4.40965788364699,0.783532859223623,0,0,0.870806981601766,0.365446585430928,0.821154570532092,0.775912131907355,0,0.225980740780532,0,0,0.126621591911757,1.17330829640882,0.801588202515337,0.640358984218058,0,0,0,0.171594997861965,0,0,2.82832841540154,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,3.49487848582361,0.551482276150566,0.494495150286999,0.741438982396034,0,0,0,0,1.12527203925513,1.2378549293751,1.66176135211674,0,0,0.182248669974074,0,0.236417121897595,0.262272940674991,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.684347351537318,0.704815022316672,1.28144895081234,0.471612915298998,0.828478110694391,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,1.46431517882356,0.250381861413,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0.426766918776564,0,0,0,0.559518030877778,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0.207471757392654,0.161475645631851,0,1.76665893301846,0.589848616738702,0.366857197043358,0,0,0,0,0,0,0,2.09525355585138,0,2.06998520703863,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0,0,0.127762427639595,0,0,0,0,1.68534503309014,0,0,0.135939465953663,0.131545547125698,2.12748913591143,0.333694205676207,0.156986185701028,0.314231179832004,2.80272163313789,0,0,0.9555033757741,0,0,0.697448552208751,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,4.02679554472052,1.17780280338292,0.487671699929078,0,0,0,0,0,0,0.118920090777569,0,0,1.35866559210006,2.70109553377806,0.218559560503957,7.52507674178437,0,1.88541237681301,0.196308467114945,0,0,0,0,0.0644578879735772,0,3.03541695629618,0.352894871715692,0.561689566824178,0,0.458729283404541,0,0,0.271965960763659,0,0,0,0,0,0.883164973845552,0.655593431782173,0.126698501011437,0.815910637935854,1.06886962106224,1.28652859348783,1.25353769646188,0,0,0.829169439458779,0,0.639701945702943,0,0.0645889098360061,0.0620747142958579,0,0,0,0.870866991587845,0,0.6061684771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| ||
|short_description=p@chr19:49004794..49004810,- | |short_description=p@chr19:49004794..49004810,- | ||
}} | }} |
Revision as of 19:22, 17 November 2012
Short description: | p@chr19:49004794..49004810, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:49004794..49004810, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.77e-16 | 7 |
germ cell | 2.77e-16 | 7 |
epithelial cell | 2.72e-14 | 253 |
endo-epithelial cell | 3.64e-10 | 42 |
endodermal cell | 3.49e-09 | 58 |
corneal epithelial cell | 2.63e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male organism | 3.65e-08 | 22 |
male reproductive system | 3.65e-08 | 22 |
male reproductive organ | 6.38e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.80e-14 | 106 |
cell type cancer | 3.90e-13 | 143 |
adenocarcinoma | 3.28e-11 | 25 |
cancer | 9.72e-08 | 235 |
disease of cellular proliferation | 2.03e-07 | 239 |
clear cell adenocarcinoma | 5.64e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.