FFCP PHASE1:Hg19::chr5:271495..271502,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0002076!3.87e-09!43;CL:0000223!1.92e-08!59;CL:0002368!7.95e-08!13;CL:0000066!7.66e-07!254 | |ontology_enrichment_celltype=CL:0002076!3.87e-09!43;CL:0000223!1.92e-08!59;CL:0002368!7.95e-08!13;CL:0000066!7.66e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000239;4.60e-13;3!CL:1000615;4.60e-13;3!CL:0002306;4.60e-13;3!CL:0002368;4.26e-11;13!CL:0000313;7.22e-10;1!CL:0000312;4.37e-08;5!CL:0000240;7.15e-07;6!CL:0000311;7.15e-07;6!CL:0000079;7.15e-07;6!CL:0000237;7.15e-07;6!CL:0002076;7.52e-07;42 | |ontology_enrichment_celltype_v019=CL:0000239;4.60e-13;3!CL:1000615;4.60e-13;3!CL:0002306;4.60e-13;3!CL:0002368;4.26e-11;13!CL:0000313;7.22e-10;1!CL:0000312;4.37e-08;5!CL:0000240;7.15e-07;6!CL:0000311;7.15e-07;6!CL:0000079;7.15e-07;6!CL:0000237;7.15e-07;6!CL:0002076;7.52e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.89e-13,3;CL:1000615,4.89e-13,3;CL:0002306,4.89e-13,3;CL:0002368,4.21e-11,13;CL:0000313,5.79e-10,1;CL:0000312,3.87e-08,5;CL:0002076,4.70e-07,42;CL:0000240,6.46e-07,6;CL:0000311,6.46e-07,6;CL:0000079,6.46e-07,6;CL:0000237,6.46e-07,6;CL:0000036,6.46e-07,6;CL:0000357,6.46e-07,6;CL:0000114,6.46e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.24e-10;1!CL:0000357;7.15e-07;6!CL:0000114;7.15e-07;6 | |ontology_enrichment_development_v019=UBERON:0009143;3.24e-10;1!CL:0000357;7.15e-07;6!CL:0000114;7.15e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;7.22e-10;1 | |ontology_enrichment_disease_v019=DOID:2152;7.22e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,5.79e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000065!1.60e-11!53;UBERON:0001737!1.61e-10!9;UBERON:0001557!1.24e-09!19;UBERON:0001004!1.52e-09!72;UBERON:0004119!2.56e-09!169;UBERON:0000925!2.56e-09!169;UBERON:0006595!2.56e-09!169;UBERON:0000072!5.15e-09!46;UBERON:0004921!6.93e-08!129;UBERON:0004185!6.93e-08!129;UBERON:0008947!3.15e-07!38;UBERON:0003258!3.15e-07!38;UBERON:0001007!9.69e-07!155;UBERON:0001555!9.69e-07!155;UBERON:0007026!9.69e-07!155 | |ontology_enrichment_uberon=UBERON:0000065!1.60e-11!53;UBERON:0001737!1.61e-10!9;UBERON:0001557!1.24e-09!19;UBERON:0001004!1.52e-09!72;UBERON:0004119!2.56e-09!169;UBERON:0000925!2.56e-09!169;UBERON:0006595!2.56e-09!169;UBERON:0000072!5.15e-09!46;UBERON:0004921!6.93e-08!129;UBERON:0004185!6.93e-08!129;UBERON:0008947!3.15e-07!38;UBERON:0003258!3.15e-07!38;UBERON:0001007!9.69e-07!155;UBERON:0001555!9.69e-07!155;UBERON:0007026!9.69e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0006853;4.60e-13;3!UBERON:0007685;4.60e-13;3!UBERON:0004134;4.60e-13;3!UBERON:0004911;7.22e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0006853;4.60e-13;3!UBERON:0007685;4.60e-13;3!UBERON:0004134;4.60e-13;3!UBERON:0004911;7.22e-10;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,4.89e-13,3;UBERON:0007685,4.89e-13,3;UBERON:0004134,4.89e-13,3;UBERON:0004911,5.79e-10,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,1.8072355126695,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,1.29096936716765,1.35426486594342,0.376484679085209,0,0,0.612167784741805,0,0,0.329851300186716,0,0,0,1.13477044938228,0,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,1.72082757233402,0,0.132529768321485,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0.591534000199219,0.168584690078102,0.241011029883482,0.220587945464788,0.435758888184812,0,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,3.95101027471052,0,2.81481122752566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0.283550194484773,0.179117045405697,0.871901815541886,3.4504441124869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,6.37190682612596,3.3243040357149,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0.330569830721956,2.11409074101617,10.9746932745342,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,2.17781969722645,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,2.36387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0.697118721393016,0.153900517007594,0,0,0.718061155278177,0.108647371922008,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,0.859930162358083,0.387025325156341,1.09633975629278,0.821154570532092,2.71569246167574,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.560544326627578,0,0.863710364874486,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,1.67783147696688,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.385870790539723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0,0,0.186224142887574,0,0,0,0,0.684466602170562,0.202056159043763,0.286888821570705,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,1.8072355126695,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,1.29096936716765,1.35426486594342,0.376484679085209,0,0,0.612167784741805,0,0,0.329851300186716,0,0,0,1.13477044938228,0,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,1.72082757233402,0,0.132529768321485,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0.591534000199219,0.168584690078102,0.241011029883482,0.220587945464788,0.435758888184812,0,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,3.95101027471052,0,2.81481122752566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0.283550194484773,0.179117045405697,0.871901815541886,3.4504441124869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,6.37190682612596,3.3243040357149,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0.330569830721956,2.11409074101617,10.9746932745342,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,2.17781969722645,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,2.36387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0.697118721393016,0.153900517007594,0,0,0.718061155278177,0.108647371922008,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,0.859930162358083,0.387025325156341,1.09633975629278,0.821154570532092,2.71569246167574,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.560544326627578,0,0.863710364874486,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,1.67783147696688,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.385870790539723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0,0,0.186224142887574,0,0,0,0,0.684466602170562,0.202056159043763,0.286888821570705,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p3@PDCD6 | |short_description=p3@PDCD6 | ||
}} | }} |
Revision as of 22:31, 17 November 2012
Short description: | p3@PDCD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PDCD6_5end |
Coexpression cluster: | NA |
Association with transcript: | -233bp_to_ENST00000264933, NM_013232, uc003jas.2, uc003jat.1, uc003jau.1, uc010isw.1_5end |
EntrezGene: | PDCD6 |
HGNC: | 8765 |
UniProt: | O75340Q53FC3Q86W51Q2YDC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.89e-13 | 3 |
kidney cortex tubule cell | 4.89e-13 | 3 |
epithelial cell of proximal tubule | 4.89e-13 | 3 |
respiratory epithelial cell | 4.21e-11 | 13 |
serous secreting cell | 5.79e-10 | 1 |
keratinocyte | 3.87e-08 | 5 |
endo-epithelial cell | 4.70e-07 | 42 |
stratified squamous epithelial cell | 6.46e-07 | 6 |
keratin accumulating cell | 6.46e-07 | 6 |
stratified epithelial cell | 6.46e-07 | 6 |
keratinizing barrier epithelial cell | 6.46e-07 | 6 |
epithelial fate stem cell | 6.46e-07 | 6 |
stratified epithelial stem cell | 6.46e-07 | 6 |
surface ectodermal cell | 6.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 4.89e-13 | 3 |
region of nephron tubule | 4.89e-13 | 3 |
proximal tubule | 4.89e-13 | 3 |
epithelium of female gonad | 5.79e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.79e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.