FFCP PHASE1:Hg19::chr9:134585221..134585254,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!6.37e-11!42;CL:0000860!1.24e-09!45;CL:0002139!2.39e-07!24;CL:0002194!7.69e-07!63;CL:0000576!7.69e-07!63;CL:0000040!7.69e-07!63;CL:0000559!7.69e-07!63 | |ontology_enrichment_celltype=CL:0002057!6.37e-11!42;CL:0000860!1.24e-09!45;CL:0002139!2.39e-07!24;CL:0002194!7.69e-07!63;CL:0000576!7.69e-07!63;CL:0000040!7.69e-07!63;CL:0000559!7.69e-07!63 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.02e-56!115;UBERON:0001049!1.08e-20!57;UBERON:0005068!1.08e-20!57;UBERON:0006241!1.08e-20!57;UBERON:0007135!1.08e-20!57;UBERON:0003080!2.34e-17!42;UBERON:0002616!5.23e-17!59;UBERON:0002780!1.75e-16!41;UBERON:0001890!1.75e-16!41;UBERON:0006240!1.75e-16!41;UBERON:0002020!1.86e-16!34;UBERON:0003528!1.86e-16!34;UBERON:0001893!3.51e-16!34;UBERON:0003075!3.60e-16!86;UBERON:0007284!3.60e-16!86;UBERON:0002791!1.61e-15!33;UBERON:0001869!3.36e-15!32;UBERON:0002346!9.61e-15!90;UBERON:0000955!8.61e-14!69;UBERON:0006238!8.61e-14!69;UBERON:0005743!2.59e-13!86;UBERON:0001017!6.06e-13!82;UBERON:0002619!3.28e-12!22;UBERON:0000073!4.52e-12!94;UBERON:0001016!4.52e-12!94;UBERON:0004111!8.43e-11!241;UBERON:0001950!1.05e-10!20;UBERON:0003056!1.99e-10!61;UBERON:0000956!4.39e-10!25;UBERON:0000203!4.39e-10!25;UBERON:0000025!1.99e-09!194;UBERON:0000477!6.85e-09!286;UBERON:0000153!8.00e-09!129;UBERON:0007811!8.00e-09!129;UBERON:0002420!1.66e-08!9;UBERON:0007245!1.66e-08!9;UBERON:0010009!1.66e-08!9;UBERON:0010011!1.66e-08!9;UBERON:0000454!1.66e-08!9;UBERON:0002308!1.81e-08!9;UBERON:0000125!1.81e-08!9;UBERON:0000468!2.70e-08!659;UBERON:0000062!3.16e-08!511;UBERON:0000033!1.22e-07!123;UBERON:0002298!2.68e-07!8;UBERON:0001871!2.89e-07!7;UBERON:0000467!6.01e-07!625;UBERON:0000480!7.22e-07!626;UBERON:0009663!8.67e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!3.02e-56!115;UBERON:0001049!1.08e-20!57;UBERON:0005068!1.08e-20!57;UBERON:0006241!1.08e-20!57;UBERON:0007135!1.08e-20!57;UBERON:0003080!2.34e-17!42;UBERON:0002616!5.23e-17!59;UBERON:0002780!1.75e-16!41;UBERON:0001890!1.75e-16!41;UBERON:0006240!1.75e-16!41;UBERON:0002020!1.86e-16!34;UBERON:0003528!1.86e-16!34;UBERON:0001893!3.51e-16!34;UBERON:0003075!3.60e-16!86;UBERON:0007284!3.60e-16!86;UBERON:0002791!1.61e-15!33;UBERON:0001869!3.36e-15!32;UBERON:0002346!9.61e-15!90;UBERON:0000955!8.61e-14!69;UBERON:0006238!8.61e-14!69;UBERON:0005743!2.59e-13!86;UBERON:0001017!6.06e-13!82;UBERON:0002619!3.28e-12!22;UBERON:0000073!4.52e-12!94;UBERON:0001016!4.52e-12!94;UBERON:0004111!8.43e-11!241;UBERON:0001950!1.05e-10!20;UBERON:0003056!1.99e-10!61;UBERON:0000956!4.39e-10!25;UBERON:0000203!4.39e-10!25;UBERON:0000025!1.99e-09!194;UBERON:0000477!6.85e-09!286;UBERON:0000153!8.00e-09!129;UBERON:0007811!8.00e-09!129;UBERON:0002420!1.66e-08!9;UBERON:0007245!1.66e-08!9;UBERON:0010009!1.66e-08!9;UBERON:0010011!1.66e-08!9;UBERON:0000454!1.66e-08!9;UBERON:0002308!1.81e-08!9;UBERON:0000125!1.81e-08!9;UBERON:0000468!2.70e-08!659;UBERON:0000062!3.16e-08!511;UBERON:0000033!1.22e-07!123;UBERON:0002298!2.68e-07!8;UBERON:0001871!2.89e-07!7;UBERON:0000467!6.01e-07!625;UBERON:0000480!7.22e-07!626;UBERON:0009663!8.67e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.58e-08;3!UBERON:0000946;1.58e-08;3!UBERON:0004151;2.28e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0003978;1.58e-08;3!UBERON:0000946;1.58e-08;3!UBERON:0004151;2.28e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.68e-26,114;UBERON:0003978,1.61e-08,3;UBERON:0009751,1.61e-08,3;UBERON:0000946,1.61e-08,3;UBERON:0002523,1.61e-08,3;UBERON:0005983,1.61e-08,3;UBERON:0002165,1.61e-08,3;UBERON:0002062,1.61e-08,3;UBERON:0007280,1.61e-08,3;UBERON:0004151,2.30e-08,3 | |||
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| ||
|short_description=p3@RAPGEF1 | |short_description=p3@RAPGEF1 | ||
}} | }} |
Revision as of 04:47, 19 November 2012
Short description: | p3@RAPGEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RAPGEF1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000337036, ENST00000372190, ENST00000372191, ENST00000398415, ENST00000411834, ENST00000427994, ENST00000437236, NM_198679, uc004cbb.2_5end |
EntrezGene: | RAPGEF1 |
HGNC: | 4568 |
UniProt: | F5H4P5E9PDT1F5H704C9JL20Q5JUE5E7ETL5Q13905 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.68e-26 | 114 |
valve | 1.61e-08 | 3 |
cardiac mesenchyme | 1.61e-08 | 3 |
cardial valve | 1.61e-08 | 3 |
tunica intima | 1.61e-08 | 3 |
heart layer | 1.61e-08 | 3 |
endocardium | 1.61e-08 | 3 |
endocardial cushion | 1.61e-08 | 3 |
presumptive endocardium | 1.61e-08 | 3 |
cardiac chamber | 2.30e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.