FFCP PHASE1:Hg19::chr1:153307493..153307496,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!7.25e-09!254 | |ontology_enrichment_celltype=CL:0000066!7.25e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:1001319;7.02e-13;1!CL:1000600;7.02e-13;1!CL:0000817;2.91e-12;1!CL:0000317;9.27e-07;2!CL:1000448;9.27e-07;2!CL:0002308;9.27e-07;2!CL:0002097;9.27e-07;2!CL:0002140;9.27e-07;2!CL:0002535;9.27e-07;2 | |ontology_enrichment_celltype_v019=CL:1001319;7.02e-13;1!CL:1000600;7.02e-13;1!CL:0000817;2.91e-12;1!CL:0000317;9.27e-07;2!CL:1000448;9.27e-07;2!CL:0002308;9.27e-07;2!CL:0002097;9.27e-07;2!CL:0002140;9.27e-07;2!CL:0002535;9.27e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,7.03e-13,1;CL:1000600,7.03e-13,1;CL:0002097,7.61e-07,2;CL:0002535,9.02e-07,2;CL:0000317,9.54e-07,2;CL:1000448,9.54e-07,2;CL:0002308,9.54e-07,2;CL:0002140,9.54e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!3.97e-25!235;DOID:14566!3.81e-24!239;DOID:305!9.65e-21!106;DOID:1749!6.21e-17!14;DOID:0050687!3.17e-16!143;DOID:0050686!2.59e-14!137;DOID:2531!1.21e-08!51;DOID:0060083!1.21e-08!51;DOID:1240!7.40e-07!39 | |ontology_enrichment_disease=DOID:162!3.97e-25!235;DOID:14566!3.81e-24!239;DOID:305!9.65e-21!106;DOID:1749!6.21e-17!14;DOID:0050687!3.17e-16!143;DOID:0050686!2.59e-14!137;DOID:2531!1.21e-08!51;DOID:0060083!1.21e-08!51;DOID:1240!7.40e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.51e-13;14!DOID:170;3.25e-08;6!DOID:4074;9.27e-07;2!DOID:4905;9.27e-07;2!DOID:3498;9.27e-07;2 | |ontology_enrichment_disease_v019=DOID:1749;5.51e-13;14!DOID:170;3.25e-08;6!DOID:4074;9.27e-07;2!DOID:4905;9.27e-07;2!DOID:3498;9.27e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,5.27e-13,14;DOID:305,3.20e-09,106;DOID:170,2.61e-08,6;DOID:162,3.02e-07,235;DOID:14566,4.73e-07,239;DOID:4074,8.06e-07,2;DOID:4905,8.06e-07,2;DOID:3498,8.06e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003729!2.06e-09!5;UBERON:0000344!1.26e-08!12;UBERON:0003343!8.80e-08!4;UBERON:0004785!8.80e-08!4 | |ontology_enrichment_uberon=UBERON:0003729!2.06e-09!5;UBERON:0000344!1.26e-08!12;UBERON:0003343!8.80e-08!4;UBERON:0004785!8.80e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.02e-13;1!UBERON:0001256;7.02e-13;1!UBERON:0001259;7.02e-13;1!UBERON:0001255;4.55e-07;2!UBERON:0001556;4.55e-07;2!UBERON:0006562;5.90e-07;2!UBERON:0002419;9.27e-07;2!UBERON:0007771;9.27e-07;2!UBERON:0003297;9.27e-07;2!UBERON:0001821;9.27e-07;2!UBERON:0006955;9.27e-07;2!UBERON:0003487;9.27e-07;2!UBERON:0004801;9.27e-07;2!UBERON:0001820;9.27e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004645;7.02e-13;1!UBERON:0001256;7.02e-13;1!UBERON:0001259;7.02e-13;1!UBERON:0001255;4.55e-07;2!UBERON:0001556;4.55e-07;2!UBERON:0006562;5.90e-07;2!UBERON:0002419;9.27e-07;2!UBERON:0007771;9.27e-07;2!UBERON:0003297;9.27e-07;2!UBERON:0001821;9.27e-07;2!UBERON:0006955;9.27e-07;2!UBERON:0003487;9.27e-07;2!UBERON:0004801;9.27e-07;2!UBERON:0001820;9.27e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.03e-13,1;UBERON:0001256,7.03e-13,1;UBERON:0001259,7.03e-13,1;UBERON:0001255,4.56e-07,2;UBERON:0001556,4.56e-07,2;UBERON:0006955,9.02e-07,2;UBERON:0004801,9.02e-07,2;UBERON:0002419,9.54e-07,2;UBERON:0007771,9.54e-07,2;UBERON:0003297,9.54e-07,2;UBERON:0001821,9.54e-07,2;UBERON:0003487,9.54e-07,2;UBERON:0001820,9.54e-07,2;UBERON:0005089,9.54e-07,2;UBERON:0005088,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,1.84820002233648,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.626909658919938,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.328508624055237,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,2.16941611240793,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.854592569019785,0,0.490080431962063,0,1.15415370381156,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0.174919999992391,0,1.365521379426,0,2.83665218121524,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0.179515288819544,0.325942115766024,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0.948768663620925,1.27149263184303,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0.728341138602278,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,1.30588809870604,0,0,0,0,0.0821154570532092,0,0,0,0.274083849293502,0,0,0,0.64127056201227,0,0,0,0.572682980829578,0,0.288109595976299,0.124252535565433,0.942776138467182,0.815425236441684,2.71967400412066,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0.964518890790115,0.550157746388935,1.24632101408756,0.2249738915515,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,2.55336503108073,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,1.71553273099941,0,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.825788063434183,0.733714394086716,0.462102664601353,0,0,0.198916222116275,0,0,0,0.785720083444267,0,0.147856086217045,0,0,0,0,0,0,0,0,2.04419884223352,0,0,0,0,0,0.576169937778896,0,0,0,2.71845834033127,0.333694205676207,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.237840181555137,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0.71421575442263,3.17605384544123,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0.252332849670158,0.874124575709564,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.193766729508018,0.0620747142958579,0.33639558774184,0,0,0,0,0,0,0,4.31437323638165,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,1.84820002233648,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.626909658919938,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.328508624055237,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,2.16941611240793,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.854592569019785,0,0.490080431962063,0,1.15415370381156,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0.174919999992391,0,1.365521379426,0,2.83665218121524,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0.179515288819544,0.325942115766024,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0.948768663620925,1.27149263184303,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0.728341138602278,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,1.30588809870604,0,0,0,0,0.0821154570532092,0,0,0,0.274083849293502,0,0,0,0.64127056201227,0,0,0,0.572682980829578,0,0.288109595976299,0.124252535565433,0.942776138467182,0.815425236441684,2.71967400412066,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0.964518890790115,0.550157746388935,1.24632101408756,0.2249738915515,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,2.55336503108073,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,1.71553273099941,0,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.825788063434183,0.733714394086716,0.462102664601353,0,0,0.198916222116275,0,0,0,0.785720083444267,0,0.147856086217045,0,0,0,0,0,0,0,0,2.04419884223352,0,0,0,0,0,0.576169937778896,0,0,0,2.71845834033127,0.333694205676207,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.237840181555137,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0.71421575442263,3.17605384544123,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0.252332849670158,0.874124575709564,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.193766729508018,0.0620747142958579,0.33639558774184,0,0,0,0,0,0,0,4.31437323638165,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr1:153307493..153307496,+ | |short_description=p@chr1:153307493..153307496,+ | ||
}} | }} |
Revision as of 05:07, 19 November 2012
Short description: | p@chr1:153307493..153307496, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:153307493..153307496, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 7.03e-13 | 1 |
lower urinary tract cell | 7.03e-13 | 1 |
cortical cell of adrenal gland | 7.61e-07 | 2 |
epithelial cell of cervix | 9.02e-07 | 2 |
sebum secreting cell | 9.54e-07 | 2 |
epithelial cell of sweat gland | 9.54e-07 | 2 |
epithelial cell of skin gland | 9.54e-07 | 2 |
acinar cell of sebaceous gland | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.03e-13 | 1 |
wall of urinary bladder | 7.03e-13 | 1 |
mucosa of urinary bladder | 7.03e-13 | 1 |
urinary bladder | 4.56e-07 | 2 |
lower urinary tract | 4.56e-07 | 2 |
uterine epithelium | 9.02e-07 | 2 |
cervix epithelium | 9.02e-07 | 2 |
skin gland | 9.54e-07 | 2 |
epidermis gland | 9.54e-07 | 2 |
gland of integumental system | 9.54e-07 | 2 |
sebaceous gland | 9.54e-07 | 2 |
skin sebaceous gland | 9.54e-07 | 2 |
sweat gland | 9.54e-07 | 2 |
sweat gland placode | 9.54e-07 | 2 |
sebaceous gland placode | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.27e-13 | 14 |
carcinoma | 3.20e-09 | 106 |
endocrine gland cancer | 2.61e-08 | 6 |
cancer | 3.02e-07 | 235 |
disease of cellular proliferation | 4.73e-07 | 239 |
pancreas adenocarcinoma | 8.06e-07 | 2 |
pancreatic carcinoma | 8.06e-07 | 2 |
pancreatic ductal adenocarcinoma | 8.06e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.