FFCP PHASE1:Hg19::chr9:125836579..125836591,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000057!1.75e-09!75;CL:0000055!3.92e-09!180;CL:0002620!6.10e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.75e-09!75;CL:0000055!3.92e-09!180;CL:0002620!6.10e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.54e-18;23!CL:0002615;4.26e-11;3!CL:0000135;5.68e-11;3!CL:0000388;5.68e-11;3!CL:0002580;6.61e-11;3!CL:0000153;7.15e-10;9!CL:0000447;7.15e-10;9!CL:0000138;7.57e-10;6!CL:0000136;6.77e-09;13!CL:0002561;4.61e-08;2!CL:0002617;4.77e-08;2!CL:0002334;6.37e-07;12!CL:0000499;9.19e-07;28 | |ontology_enrichment_celltype_v019=CL:0002620;3.54e-18;23!CL:0002615;4.26e-11;3!CL:0000135;5.68e-11;3!CL:0000388;5.68e-11;3!CL:0002580;6.61e-11;3!CL:0000153;7.15e-10;9!CL:0000447;7.15e-10;9!CL:0000138;7.57e-10;6!CL:0000136;6.77e-09;13!CL:0002561;4.61e-08;2!CL:0002617;4.77e-08;2!CL:0002334;6.37e-07;12!CL:0000499;9.19e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.78e-18,23;CL:0000057,3.51e-17,76;CL:0000136,2.24e-13,15;CL:0000135,3.99e-11,3;CL:0000388,3.99e-11,3;CL:0002615,4.42e-11,3;CL:0002580,5.99e-11,3;CL:0000153,7.64e-10,9;CL:0000447,7.64e-10,9;CL:0000058,7.93e-10,6;CL:0000138,7.93e-10,6;CL:0002561,4.61e-08,2;CL:0002617,4.77e-08,2;CL:0002334,6.38e-07,12;CL:0000499,8.67e-07,28 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;7.36e-11;5!DOID:450;7.36e-11;5!DOID:66;7.36e-11;5!DOID:423;7.36e-11;5!DOID:0080000;7.36e-11;5!DOID:11722;7.36e-11;5 | |ontology_enrichment_disease_v019=DOID:17;7.36e-11;5!DOID:450;7.36e-11;5!DOID:66;7.36e-11;5!DOID:423;7.36e-11;5!DOID:0080000;7.36e-11;5!DOID:11722;7.36e-11;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.21e-11,5;DOID:450,4.21e-11,5;DOID:66,4.21e-11,5;DOID:423,4.21e-11,5;DOID:0080000,4.21e-11,5;DOID:11722,4.21e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.38e-07!6;UBERON:0002358!2.38e-07!6;UBERON:0003684!2.38e-07!6;UBERON:0001178!2.38e-07!6 | |ontology_enrichment_uberon=UBERON:0003688!2.38e-07!6;UBERON:0002358!2.38e-07!6;UBERON:0003684!2.38e-07!6;UBERON:0001178!2.38e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.25e-14;6!UBERON:0002358;2.25e-14;6!UBERON:0003684;2.25e-14;6!UBERON:0001178;2.25e-14;6!UBERON:0004457;1.65e-13;9!UBERON:0000042;1.65e-13;9!UBERON:0007846;5.68e-11;3!UBERON:0000043;5.68e-11;3!UBERON:0007845;5.68e-11;3!UBERON:0002097;3.53e-09;41!UBERON:0000310;1.94e-08;10!UBERON:0005933;4.61e-08;2!UBERON:0005942;4.61e-08;2!UBERON:0005932;4.61e-08;2!UBERON:0001443;1.23e-07;11!UBERON:0002199;3.48e-07;46!UBERON:0002416;3.48e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0003688;2.25e-14;6!UBERON:0002358;2.25e-14;6!UBERON:0003684;2.25e-14;6!UBERON:0001178;2.25e-14;6!UBERON:0004457;1.65e-13;9!UBERON:0000042;1.65e-13;9!UBERON:0007846;5.68e-11;3!UBERON:0000043;5.68e-11;3!UBERON:0007845;5.68e-11;3!UBERON:0002097;3.53e-09;41!UBERON:0000310;1.94e-08;10!UBERON:0005933;4.61e-08;2!UBERON:0005942;4.61e-08;2!UBERON:0005932;4.61e-08;2!UBERON:0001443;1.23e-07;11!UBERON:0002199;3.48e-07;46!UBERON:0002416;3.48e-07;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.52e-14,6;UBERON:0002358,2.52e-14,6;UBERON:0003684,2.52e-14,6;UBERON:0001178,2.52e-14,6;UBERON:0002097,9.07e-13,41;UBERON:0007846,3.99e-11,3;UBERON:0000043,3.99e-11,3;UBERON:0007845,3.99e-11,3;UBERON:0002199,5.01e-11,46;UBERON:0002416,5.01e-11,46;UBERON:0004457,6.65e-10,12;UBERON:0000042,6.65e-10,12;UBERON:0000310,1.85e-08,10;UBERON:0005933,4.61e-08,2;UBERON:0005942,4.61e-08,2;UBERON:0005932,4.61e-08,2;UBERON:0001443,1.18e-07,11 | |||
|phase1_expression=6.54042165374004,5.56661362116556,3.24195129420734,13.009528785907,3.5756887554183,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,21.3249099906894,24.5655576211586,7.09747942908036,0,3.40644409211845,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,9.93943903390637,0.379891534993739,0,0.286836620748814,0,1.68203280042692,1.06748995729705,0.24666754841716,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,1.22595118319608,0,0,1.97328599257748,9.61008249683553,5.93409323246773,0,1.95799805553034,5.15281080091258,4.09457083929498,0.506328996723799,0.487185025805993,1.7670364197088,15.5564328705486,7.75901072730297,1.42003837006646,1.10827308050404,2.54340888465731,0.193260853163297,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,8.8229906326076,4.33127689001751,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0.148631162288728,0,1.17587489739202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,1.04007436911366,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.599837947092342,0,0,0,0.958499421966331,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,1.10422342547226,0.500170521059677,0,8.94274704582471,4.81758269752337,2.83864347061082,0.702848489956279,0.902838299183157,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0.604780586659361,2.72918588600655,8.13348458426731,3.64858122762996,2.17836553734692,9.72243773226737,0.482561763430822,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.368323955743585,0,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0,0.429680979473094,0.435050081742686,0.170453254832202,0.623224249527161,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,2.87795932133304,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.785992328104969,0,0,9.49984358839489,0.987884678879706,0,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,1.19548792950642,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.923403102045565,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.471388069233591,0.135904206073614,0.313808538937,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0.191915197319445,0,0,0,1.62899880526114,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0,0,0.124980407962107,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0.761610424337591,0,0,0,0.464033759878494,0,0.400027764663154,4.12074846219351,4.71449284272287,6.30924491143255,0,3.43106546199881,0,2.26705925512272,0.231522474323834,0.244736704506468,0.71635536432595,1.85280868296583,0.219284049578707,0,0,0.506827321959218,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0.425149840203366,0.123935764259002,0,2.54403480522735,0,0,0.352675943690684,0.6124909547064,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.126831620387814,0,0,1.48863353516788,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,1.19502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|phase1_expression=6.54042165374004,5.56661362116556,3.24195129420734,13.009528785907,3.5756887554183,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,21.3249099906894,24.5655576211586,7.09747942908036,0,3.40644409211845,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,9.93943903390637,0.379891534993739,0,0.286836620748814,0,1.68203280042692,1.06748995729705,0.24666754841716,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,1.22595118319608,0,0,1.97328599257748,9.61008249683553,5.93409323246773,0,1.95799805553034,5.15281080091258,4.09457083929498,0.506328996723799,0.487185025805993,1.7670364197088,15.5564328705486,7.75901072730297,1.42003837006646,1.10827308050404,2.54340888465731,0.193260853163297,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,8.8229906326076,4.33127689001751,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0.148631162288728,0,1.17587489739202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,1.04007436911366,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.599837947092342,0,0,0,0.958499421966331,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,1.10422342547226,0.500170521059677,0,8.94274704582471,4.81758269752337,2.83864347061082,0.702848489956279,0.902838299183157,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0.604780586659361,2.72918588600655,8.13348458426731,3.64858122762996,2.17836553734692,9.72243773226737,0.482561763430822,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.368323955743585,0,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0,0.429680979473094,0.435050081742686,0.170453254832202,0.623224249527161,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,2.87795932133304,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.785992328104969,0,0,9.49984358839489,0.987884678879706,0,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,1.19548792950642,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.923403102045565,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.471388069233591,0.135904206073614,0.313808538937,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0.191915197319445,0,0,0,1.62899880526114,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0,0,0.124980407962107,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0.761610424337591,0,0,0,0.464033759878494,0,0.400027764663154,4.12074846219351,4.71449284272287,6.30924491143255,0,3.43106546199881,0,2.26705925512272,0.231522474323834,0.244736704506468,0.71635536432595,1.85280868296583,0.219284049578707,0,0,0.506827321959218,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0.425149840203366,0.123935764259002,0,2.54403480522735,0,0,0.352675943690684,0.6124909547064,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.126831620387814,0,0,1.48863353516788,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,1.19502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| ||
|short_description=p@chr9:125836579..125836591,+ | |short_description=p@chr9:125836579..125836591,+ | ||
}} | }} |
Revision as of 07:59, 21 November 2012
Short description: | p@chr9:125836579..125836591, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:125836579..125836591, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.78e-18 | 23 |
fibroblast | 3.51e-17 | 76 |
fat cell | 2.24e-13 | 15 |
fibrocyte | 3.99e-11 | 3 |
tendon cell | 3.99e-11 | 3 |
adipocyte of omentum tissue | 4.42e-11 | 3 |
preadipocyte of the breast | 5.99e-11 | 3 |
GAG secreting cell | 7.64e-10 | 9 |
carbohydrate secreting cell | 7.64e-10 | 9 |
chondroblast | 7.93e-10 | 6 |
chondrocyte | 7.93e-10 | 6 |
outer root sheath cell | 4.61e-08 | 2 |
adipocyte of breast | 4.77e-08 | 2 |
preadipocyte | 6.38e-07 | 12 |
stromal cell | 8.67e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.52e-14 | 6 |
peritoneum | 2.52e-14 | 6 |
abdominal cavity | 2.52e-14 | 6 |
visceral peritoneum | 2.52e-14 | 6 |
skin of body | 9.07e-13 | 41 |
dense regular connective tissue | 3.99e-11 | 3 |
tendon | 3.99e-11 | 3 |
regular connective tissue | 3.99e-11 | 3 |
integument | 5.01e-11 | 46 |
integumental system | 5.01e-11 | 46 |
cavity lining | 6.65e-10 | 12 |
serous membrane | 6.65e-10 | 12 |
breast | 1.85e-08 | 10 |
hair root sheath | 4.61e-08 | 2 |
hair outer root sheath | 4.61e-08 | 2 |
bulb of hair follicle | 4.61e-08 | 2 |
chest | 1.18e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.21e-11 | 5 |
myotonic disease | 4.21e-11 | 5 |
muscle tissue disease | 4.21e-11 | 5 |
myopathy | 4.21e-11 | 5 |
muscular disease | 4.21e-11 | 5 |
myotonic dystrophy | 4.21e-11 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.