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MacroAPE 1083:ARI5B f1: Difference between revisions

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80-129A2;0.00663879!12181-129A3;0.00828841!12176-128I7;0.00401578!12177-128I8;0.00672494!12182-129A4;0.00798256!12183-129A5;0.00602466!12184-129A6;0.00506466!10809-111A8;0.00448857!10597-108E3;0.254263!10717-109I6;0.280793!10455-106G5;0.13898!10534-107G3;0.0789247!10429-106D6;0.0175067!10464-106H5;0.0533101!10827-111C8;0.0998538!10789-110H6;0.0387622!10828-111C9;0.00190041!10788-110H5;0.00340333!10792-110H9;0.0145041!10765-110E9;0.0656736!10829-111D1;0.0136599!10830-111D2;0.057379!10831-111D3;0.0600393!10832-111D4;0.0256727!10833-111D5;0.00158175!10764-110E8;0.00361488!10770-110F5;0.0892141!10399-106A3;0.133175!10400-106A4;0.0295028!10405-106A9;0.0118753!10834-111D6;0.031928!10835-111D7;0.344582!10836-111D8;0.0320386!10837-111D9;0.273834!10699-109G6;0.179873!10802-111A1;0.0144604!10796-110I4;0.0445964!10010-101C1;0.301237!10810-111A9;0.237865!10421-106C7;0.270479!10708-109H6;0.0552322!12235-129G3;0.68943!12236-129G4;0.290192!12237-129G5;0.661149!10167-103B5;0.270705!10151-102I7;0.754568!10428-106D5;0.74296!10795-110I3;0.0981518!10805-111A4;0.197758!10052-101G7;0.0105333!10189-103D9;0.16538!10589-108D4;0.375007!10425-106D2;0.0908554!10427-106D4;0.917864!10702-109G9;0.470607!10432-106D9;0.0167274!10496-107C1;0.00925936!10718-109I7;0.0469698!10011-101C2;0.00960037!10053-101G8;0.222552!10686-109F2;0.0479236!10084-102B3;0.603685!10012-101C3;0.95206!10085-102B4;0.976532!10482-107A5;0.178346!10419-106C5;9.28597e-05!10080-102A8;0.00262925!10760-110E4;0.407961!10709-109H7;0.0158426!10710-109H8;3.63341e-05!10703-109H1;0.313!10719-109I8;0.377939!10642-109A3;0.0126624!10177-103C6;0.926355!10164-103B2;0.763261!10173-103C2;0.917999!10166-103B4;0.605464!10083-102B2;0.897361!10188-103D8;0.713216!10552-107I3;0.445613!10553-107I4;0.103103!10013-101C4;0.367521!10536-107G5;0.163056!10618-108G6;0.957501!10423-106C9;0.00268835!10785-110H2;0.00726469!12238-129G6;0.0258459!12239-129G7;0.878864!12240-129G8;0.460605!10416-106C2;0.857897!10801-110I9;0.218927!10766-110F1;0.00967574!10824-111C5;0.0302024!10825-111C6;0.0225232!10826-111C7;0.0142986!10454-106G4;0.0220525!10409-106B4;0.0278887!10638-108I8;0.0236967!10636-108I6;0.146416!10513-107D9;0.0242424!10420-106C6;0.0307949!10082-102B1;0.32744!10014-101C5;0.174348!10070-101I7;0.212973!10452-106G2;0.207737!10453-106G3;0.66216!10449-106F8;0.709762!10042-101F6;0.968801!10069-101I6;0.996872!10193-103E4;0.036384!10631-108I1;0.948044!10438-106E6;0.000159064!10488-107B2;0.00744008!10196-103E7;0.164166!10071-101I8;0.206846!10071-101I8;0.105525!10041-101F5;0.379963!10451-106G1;0.431404!10450-106F9;0.547609!10604-108F1;0.716542!10605-108F2;0.658341!10606-108F3;0.813046!10603-108E9;0.724142!10497-107C2;0.941066!10448-106F7;0.159644!10643-109A4;0.323694!10426-106D3;0.188679!10431-106D8;0.066964!10197-103E8;0.17269!10443-106F2;0.080216!10815-111B5;0.719993!10816-111B6;0.0368549!10817-111B7;0.0494779!10015-101C6;0.0280676!10410-106B5;0.2676!10054-101G9;0.433886!10758-110E2;0.0526226!10711-109H9;0.462317!10040-101F4;0.974469!10470-106I2;0.989282!10415-106C1;0.404229!10198-103E9;0.129645!10614-108G2;0.206748!10612-108F9;0.658943!10549-107H9;0.267357!10615-108G3;0.68903!10487-107B1;0.594818!10433-106E1;0.00199983!10688-109F4;0.659181!10444-106F3;0.0283113!10444-106F3;0.760658!10485-107A8;0.830032!10413-106B8;0.933866!10175-103C4;0.356268!10161-103A8;0.757452!12131-128D7;0.920816!10624-108H3;0.0777734!10712-109I1;0.446304!10205-103F7;0.206088!10206-103F8;0.22998!10207-103F9;0.28501!10050-101G5;0.41226!10051-101G6;0.554194!10016-101C7;0.417611!10046-101G1;0.641506!10778-110G4;0.45342!10633-108I3;0.0616722!10818-111B8;0.0483999!10819-111B9;0.0683643!10820-111C1;0.0867759!10484-107A7;0.0740216!10808-111A7;0.857288!10169-103B7;0.368967!10153-102I9;0.675709!13425-144D5;0.704836!13433-144E4;0.733497!13437-144E8;0.247342!11904-125F5;0.124318!11905-125F6;0.11354!10039-101F3;0.0618147!10791-110H8;0.779692!10017-101C8;0.127408!10045-101F9;0.412368!10509-107D5;0.0737365!10839-111E2;0.0362244!10692-109F8;0.287008!10079-102A7;0.537524!10078-102A6;0.281226!10721-110A1;0.493517!10569-108B2;0.141384!10570-108B3;0.143143!10571-108B4;0.29962!10647-109A8;0.0933167!10752-110D5;0.988597!10782-110G8;0.155833!10726-110A6;0.446902!10018-101C9;0.345698!10086-102B5;0.628058!10182-103D2;0.49734!10165-103B3;0.748415!10499-107C4;0.88283!10408-106B3;0.456251!10019-101D1;0.000147183!10068-101I5;0.528539!10075-102A3;0.786698!10077-102A5;0.938298!10727-110A7;0.871113!10775-110G1;0.0543229!10412-106B7;0.0193502!12231-129F8;0.171527!12232-129F9;0.574523!12233-129G1;0.463182!12234-129G2;0.670849!10414-106B9;0.968841!10170-103B8;0.00728481!10183-103D3;0.844426!10150-102I6;0.777793!10174-103C3;0.915507!10155-103A2;0.657898!10038-101F2;0.794458!10838-111E1;0.427253!10759-110E3;0.12199!10514-107E1;0.619355!10465-106H6;0.20113!10691-109F7;0.416611!10843-111E6;0.846257!10844-111E7;0.0463984!11747-123G1;0.66692!11748-123G2;0.022082!11749-123G3;0.0157316!11750-123G4;0.00258731!11751-123G5;0.00366321!11840-124H4;0.0054705!11752-123G6;0.0171935!11753-123G7;0.016502!11754-123G8;0.00438032!11755-123G9;0.00557428!11756-123H1;0.131768!11833-124G6;0.00575173!11760-123H5;0.128112!11836-124G9;0.000447882!11758-123H3;0.0117923!11835-124G8;0.040617!11762-123H7;0.000410131!11838-124H2;0.0194479!11757-123H2;0.00035513!11759-123H4;0.231403!11761-123H6;0.0420222!11842-124H6;0.00736666!11837-124H1;0.0264588!10568-108B1;2.2541e-05!13230-141I8;0.141587!13231-141I9;0.00716591!10696-109G3;0.00841411!10493-107B7;0.297847!10494-107B8;0.707087!10850-111F4;0.933852!10851-111F5;0.380831!10852-111F6;0.963182!10853-111F7;0.42206!10854-111F8;0.502703!10855-111F9;0.923408!10856-111G1;0.200079!10847-111F1;0.271253!10846-111E9;0.171939!10848-111F2;0.372079!10845-111E8;0.252974!10857-111G2;0.0538433!10858-111G3;0.380878!10156-103A3;0.855383!11901-125F2;0.886753!11902-125F3;0.00425637!11903-125F4;0.0284738!10689-109F5;0.0569451!10648-109A9;0.473026!10784-110H1;0.937146!10744-110C6;0.109624!10772-110F7;0.654177!10474-106I6;0.17307!10600-108E6;0.508573!10684-109E9;0.422791!12226-129F3;0.206102!12227-129F4;0.929405!10508-107D4;0.134655!10539-107G8;0.528737!10607-108F4;0.374538!10555-107I6;0.528097!10774-110F9;0.770708!10637-108I7;0.409636!10663-109C6;0.742735!10728-110A8;0.079032!10729-110A9;0.159176!10430-106D7;0.0750549!10730-110B1;0.000830019!10813-111B3;0.208593!10812-111B2;0.0176171!10037-101F1;0.19465!10172-103C1;0.710309!10163-103B1;0.876692!10076-102A4;0.93308!10073-102A1;0.970037!10036-101E9;0.452565!10195-103E6;0.844916!10277-104E7;0.82535!10434-106E2;0.510373!10550-107I1;0.00123272!10545-107H5;0.189249!10544-107H4;0.0205646!10704-109H2;0.248331!10510-107D6;0.0747002!10558-107I9;0.555659!10020-101D2;0.537155!10732-110B3;0.226783!10049-101G4;0.0778249!10698-109G5;0.0473665!10437-106E5;0.000487647!10417-106C3;0.207316!10035-101E8;0.104296!10171-103B9;0.884693!10157-103A4;0.650301!10034-101E7;0.961736!10072-101I9;0.802231!10199-103F1;0.534158!10200-103F2;0.966929!10697-109G4;0.122923!10723-110A3;0.21947!10179-103C8;0.0130198!10160-103A7;0.972559!10180-103C9;0.850516!10162-103A9;0.787283!10021-101D3;0.837409!10840-111E3;0.419438!10706-109H4;0.264202!10033-101E6;0.0447106!10032-101E5;0.951789!10490-107B4;0.877132!10439-106E7;0.00996492!10022-101D4;0.404752!10176-103C5;0.179523!10469-106I1;0.756881!10067-101I4;0.323921!10411-106B6;0.0851062!10471-106I3;0.429716!10030-101E3;0.100553!10475-106I7;0.0942432!10787-110H4;4.66629e-05!10477-106I9;0.423489!10695-109G2;0.033191!11771-123I7;0.0192393!11772-123I8;0.32179!11773-123I9;0.304641!10093-102C3;0.613445!10442-106F1;0.838696!10442-106F1;0.360503!10201-103F3;0.325423!10639-108I9;0.0966071!11843-124H7;0.586227!11841-124H5;0.95901!10693-109F9;0.743703!10436-106E4;0.0458712!10483-107A6;0.0495961!10282-104F3;0.0416073!10023-101D5;0.398838!10066-101I3;0.279184!10065-101I2;0.0148035!10800-110I8;0.0989753!10610-108F7;0.329122!10841-111E4;0.331369!10541-107H1;0.254561!10842-111E5;0.426836!10562-108A4;0.174807!10024-101D6;0.155317!10064-101I1;0.358713!10609-108F6;0.268844!10048-101G3;0.205245!10781-110G7;0.267818!10181-103D1;0.206045!10159-103A6;0.614771!10056-101H2;0.867981!10737-110B8;0.223606!10025-101D7;0.00129553!10044-101F8;0.867784!10424-106D1;0.453506!10463-106H4;0.0970771!10616-108G4;0.0479018!10486-107A9;0.56707!10062-101H8;0.00206637!10202-103F4;0.47872!10158-103A5;0.338214!10441-106E9;0.530185!10031-101E4;0.210051!10063-101H9;0.745447!10063-101H9;0.434386!11763-123H8;0.0493277!11765-123I1;0.0164481!11768-123I4;0.139425!10807-111A6;0.0248774!10790-110H7;0.476949!10798-110I6;0.663558!10786-110H3;0.837095!10591-108D6;0.140652!10593-108D8;0.0504364!10590-108D5;0.0256211!10026-101D8;0.010565!10096-102C6;0.200831!10168-103B6;0.874889!10154-103A1;0.872508!10209-103G2;0.966622!10061-101H7;0.111768!10027-101D9;0.129173!10043-101F7;0.191135!10783-110G9;0.756726!10028-101E1;0.322839!10060-101H6;0.287354!10203-103F5;0.805048!10059-101H5;0.110115!10047-101G2;0.0640049!10029-101E2;0.331577!10058-101H4;0.231674!10418-106C4;0.0655039!10492-107B6;0.931297!10694-109G1;0.238414!10797-110I5;0.00391062!10057-101H3;0.0752203!10100-102D1;0.0737007!10055-101H1;0.293467!10204-103F6;0.0404718!10191-103E2;0.419185!10563-108A5;0.1928
|name=ARI5B_f1
|name=ARI5B_f1
|tomtom_result=Pax4#MA0068.1;9;0.00142603;0.678791;1;13;TGTTGGTATTGTG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!MGA1#MA0336.1;1;0.00251032;1.19491;1;13;TGTTGGTATTGTG;TTTAGAGTGTTCTATAGTCCT;-!NDT80#MA0343.1;0;0.0071693;3.41259;1;13;TGTTGGTATTGTG;TTGCGTTTTTGTGGCCGGAAA;-!Sox17#MA0078.1;-4;0.0136469;6.49592;1;9;TGTTGGTATTGTG;TTCATTGTC;+!odd#MA0454.1;-2;0.0137335;6.53714;1;11;TGTTGGTATTGTG;CTGCTACTGTT;-!Cebpa#MA0102.1;-4;0.0158666;7.55249;1;9;TGTTGGTATTGTG;GAGATTGCGAAA;-!BRCA1#MA0133.1;-5;0.0159504;7.59237;1;7;TGTTGGTATTGTG;GTGTTGT;-!HMG-1#MA0044.1;-2;0.020301;9.66329;1;9;TGTTGGTATTGTG;GTTGTACTC;+
}}
}}

Latest revision as of 14:24, 7 September 2012

Full Name: ARI5B_f1

Motif matrix
POACGT
13.25000000000000531.24999999999999965.255.25
21.9999999999999954.0000000000000056.03.0
30.04.0000000000000053.08.00000000000001
40.01.9999999999999954.9999999999999958.00000000000001
54.9999999999999951.00000000000000044.9999999999999954.000000000000005
63.01.000000000000000410.0000000000000041.0000000000000004
70.00.00.015.0
813.0000000000000050.01.9999999999999950.0
90.01.9999999999999950.013.000000000000005
100.01.00000000000000041.000000000000000413.000000000000005
111.9999999999999954.0000000000000057.9999999999999951.0000000000000004
121.9999999999999951.00000000000000044.0000000000000058.00000000000001
133.751.7500000000000056.752.7499999999999947

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Pax4#MA0068.190.001426030.678791113TGTTGGTATTGTGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
MGA1#MA0336.110.002510321.19491113TGTTGGTATTGTGTTTAGAGTGTTCTATAGTCCT-
NDT80#MA0343.100.00716933.41259113TGTTGGTATTGTGTTGCGTTTTTGTGGCCGGAAA-
Sox17#MA0078.1-40.01364696.4959219TGTTGGTATTGTGTTCATTGTC+
odd#MA0454.1-20.01373356.53714111TGTTGGTATTGTGCTGCTACTGTT-
Cebpa#MA0102.1-40.01586667.5524919TGTTGGTATTGTGGAGATTGCGAAA-
BRCA1#MA0133.1-50.01595047.5923717TGTTGGTATTGTGGTGTTGT-
HMG-1#MA0044.1-20.0203019.6632919TGTTGGTATTGTGGTTGTACTC+
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