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MacroAPE 1083:CNhs13060 bl f1: Difference between revisions

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88-110H5;0.344595!10792-110H9;0.504195!10765-110E9;0.894795!10829-111D1;0.652738!10830-111D2;0.484764!10831-111D3;0.882507!10832-111D4;0.740453!10833-111D5;0.820201!10764-110E8;0.610517!10770-110F5;0.906872!10399-106A3;0.798993!10400-106A4;0.53359!10405-106A9;0.623043!10834-111D6;0.606558!10835-111D7;0.452373!10836-111D8;0.591699!10837-111D9;0.991351!10699-109G6;0.397269!10802-111A1;0.97416!10796-110I4;0.393491!10010-101C1;0.498806!10810-111A9;0.863331!10421-106C7;0.425803!10708-109H6;0.764702!12235-129G3;0.200474!12236-129G4;0.301278!12237-129G5;0.321767!10167-103B5;0.161381!10151-102I7;0.081694!10428-106D5;0.091308!10795-110I3;0.524094!10805-111A4;0.546402!10052-101G7;0.870173!10189-103D9;0.957232!10589-108D4;0.638589!10425-106D2;0.798016!10427-106D4;0.70329!10702-109G9;0.709838!10432-106D9;0.487897!10496-107C1;0.24427!10718-109I7;0.577204!10011-101C2;0.719043!10053-101G8;0.914541!10686-109F2;0.987259!10084-102B3;0.214947!10012-101C3;0.0909919!10085-102B4;0.0834329!10482-107A5;0.12092!10419-106C5;0.924342!10080-102A8;0.872382!10760-110E4;0.606717!10709-109H7;0.859322!10710-109H8;0.18363!10703-109H1;0.192251!10719-109I8;0.55335!10642-109A3;0.890727!10177-103C6;0.356578!10164-103B2;0.0646493!10173-103C2;0.0656752!10166-103B4;0.0941512!10083-102B2;0.0704611!10188-103D8;0.0916937!10552-107I3;0.123732!10553-107I4;0.108662!10013-101C4;0.85775!10536-107G5;0.80872!10618-108G6;0.927343!10423-106C9;0.917852!10785-110H2;0.171602!12238-129G6;0.231297!12239-129G7;0.568519!12240-129G8;0.393828!10416-106C2;0.714068!10801-110I9;0.838023!10766-110F1;0.79614!10824-111C5;0.899125!10825-111C6;0.134127!10826-111C7;0.143675!10454-106G4;0.146385!10409-106B4;0.442819!10638-108I8;0.943279!10636-108I6;0.498265!10513-107D9;0.514359!10420-106C6;0.764033!10082-102B1;0.510011!10014-101C5;0.456917!10070-101I7;0.790117!10452-106G2;0.485868!10453-106G3;0.909482!10449-106F8;0.976937!10042-101F6;0.994675!10069-101I6;0.0545493!10193-103E4;0.906199!10631-108I1;0.0936644!10438-106E6;0.776929!10488-107B2;0.723765!10196-103E7;0.42683!10071-101I8;0.997393!10071-101I8;0.199127!10041-101F5;0.121274!10451-106G1;0.593186!10450-106F9;0.904787!10604-108F1;0.606869!10605-108F2;0.377487!10606-108F3;0.495307!10603-108E9;0.700668!10497-107C2;0.762445!10448-106F7;0.0674906!10643-109A4;0.805232!10426-106D3;0.586492!10431-106D8;0.422879!10197-103E8;0.608609!10443-106F2;0.895411!10815-111B5;0.0099536!10816-111B6;0.179566!10817-111B7;0.212233!10015-101C6;0.237373!10410-106B5;0.884134!10054-101G9;0.363809!10758-110E2;0.586331!10711-109H9;0.758778!10040-101F4;0.862775!10470-106I2;0.0767486!10415-106C1;0.460133!10198-103E9;0.938086!10614-108G2;0.892114!10612-108F9;0.550624!10549-107H9;0.990138!10615-108G3;0.925979!10487-107B1;0.666597!10433-106E1;0.89558!10688-109F4;0.100298!10444-106F3;0.68609!10444-106F3;0.135299!10485-107A8;0.0676686!10413-106B8;0.370671!10175-103C4;0.996661!10161-103A8;0.0985974!12131-128D7;0.0909291!10624-108H3;0.199241!10712-109I1;0.0366342!10205-103F7;0.688876!10206-103F8;0.889094!10207-103F9;0.822567!10050-101G5;0.864251!10051-101G6;0.559721!10016-101C7;0.570017!10046-101G1;0.441994!10778-110G4;0.985201!10633-108I3;0.946776!10818-111B8;0.365464!10819-111B9;0.644449!10820-111C1;0.553315!10484-107A7;0.539884!10808-111A7;0.780787!10169-103B7;0.846751!10153-102I9;0.0798014!13425-144D5;0.0957102!13433-144E4;0.776449!13437-144E8;0.511422!11904-125F5;0.280473!11905-125F6;0.629251!10039-101F3;0.852384!10791-110H8;0.0796363!10017-101C8;0.843396!10045-101F9;0.945408!10509-107D5;0.924983!10839-111E2;0.483407!10692-109F8;0.0159558!10079-102A7;0.989447!10078-102A6;0.826091!10721-110A1;0.491253!10569-108B2;0.987498!10570-108B3;0.704556!10571-108B4;0.372716!10647-109A8;0.254089!10752-110D5;0.687956!10782-110G8;0.71972!10726-110A6;0.605961!10018-101C9;0.418814!10086-102B5;0.53029!10182-103D2;0.649845!10165-103B3;0.128004!10499-107C4;0.131591!10408-106B3;0.789318!10019-101D1;0.738919!10068-101I5;0.993906!10075-102A3;0.707908!10077-102A5;0.817016!10727-110A7;0.864464!10775-110G1;0.780949!10412-106B7;0.97619!12231-129F8;0.279646!12232-129F9;0.309409!12233-129G1;0.79796!12234-129G2;0.58334!10414-106B9;0.639834!10170-103B8;0.276141!10183-103D3;0.0536937!10150-102I6;0.121846!10174-103C3;0.077576!10155-103A2;0.0788096!10038-101F2;0.107015!10838-111E1;0.100347!10759-110E3;0.655699!10514-107E1;0.750045!10465-106H6;0.423343!10691-109F7;0.953879!10843-111E6;0.420152!10844-111E7;0.856203!11747-123G1;0.289423!11748-123G2;0.660584!11749-123G3;0.621913!11750-123G4;0.356131!11751-123G5;0.773442!11840-124H4;0.550552!11752-123G6;0.601935!11753-123G7;0.128113!11754-123G8;0.943879!11755-123G9;0.970577!11756-123H1;0.774324!11833-124G6;0.892098!11760-123H5;0.203926!11836-124G9;0.929837!11758-123H3;0.808645!11835-124G8;0.758616!11762-123H7;0.459597!11838-124H2;0.465506!11757-123H2;0.88815!11759-123H4;0.734718!11761-123H6;0.788456!11842-124H6;0.665031!11837-124H1;0.926586!10568-108B1;0.655745!13230-141I8;0.509526!13231-141I9;0.277153!10696-109G3;0.27847!10493-107B7;0.812433!10494-107B8;0.498938!10850-111F4;0.17099!10851-111F5;0.0434793!10852-111F6;0.186814!10853-111F7;0.782381!10854-111F8;0.120586!10855-111F9;0.728042!10856-111G1;0.339119!10847-111F1;0.277576!10846-111E9;0.947116!10848-111F2;0.302427!10845-111E8;0.162681!10857-111G2;0.750852!10858-111G3;0.352487!10156-103A3;0.990384!11901-125F2;0.0999327!11902-125F3;0.409666!11903-125F4;0.661305!10689-109F5;0.668823!10648-109A9;0.980499!10784-110H1;0.996189!10744-110C6;0.704521!10772-110F7;0.604138!10474-106I6;0.76796!10600-108E6;0.752137!10684-109E9;0.784155!12226-129F3;0.360782!12227-129F4;0.659447!10508-107D4;0.184987!10539-107G8;0.0953774!10607-108F4;0.279558!10555-107I6;0.901124!10774-110F9;0.417775!10637-108I7;0.591322!10663-109C6;0.983146!10728-110A8;0.640565!10729-110A9;0.691173!10430-106D7;0.669601!10730-110B1;0.613287!10813-111B3;0.511658!10812-111B2;0.721127!10037-101F1;0.0408034!10172-103C1;0.0678627!10163-103B1;0.150189!10076-102A4;0.0977291!10073-102A1;0.0844656!10036-101E9;0.104719!10195-103E6;0.085555!10277-104E7;0.0999154!10434-106E2;0.0341612!10550-107I1;0.944245!10545-107H5;0.844958!10544-107H4;0.52218!10704-109H2;0.888168!10510-107D6;0.482639!10558-107I9;0.0779504!10020-101D2;0.879303!10732-110B3;0.680829!10049-101G4;0.492127!10698-109G5;0.759248!10437-106E5;0.623733!10417-106C3;0.616494!10035-101E8;0.36361!10171-103B9;0.0759394!10157-103A4;0.0383231!10034-101E7;0.11176!10072-101I9;0.0746873!10199-103F1;0.129059!10200-103F2;0.6687!10697-109G4;0.832803!10723-110A3;0.440466!10179-103C8;0.961407!10160-103A7;0.167337!10180-103C9;0.166932!10162-103A9;0.0227727!10021-101D3;0.0254592!10840-111E3;0.850662!10706-109H4;0.864598!10033-101E6;0.778578!10032-101E5;0.0843774!10490-107B4;0.101455!10439-106E7;0.910809!10022-101D4;0.659644!10176-103C5;0.968379!10469-106I1;0.0772254!10067-101I4;0.81616!10411-106B6;0.44327!10471-106I3;0.748454!10030-101E3;0.514574!10475-106I7;0.204279!10787-110H4;0.671101!10477-106I9;0.81261!10695-109G2;0.763659!11771-123I7;0.708629!11772-123I8;0.459755!11773-123I9;0.828026!10093-102C3;0.500177!10442-106F1;0.79987!10442-106F1;0.614352!10201-103F3;0.681785!10639-108I9;0.899826!11843-124H7;0.798699!11841-124H5;0.481299!10693-109F9;0.394408!10436-106E4;0.885263!10483-107A6;0.664643!10282-104F3;0.89377!10023-101D5;0.797383!10066-101I3;0.377523!10065-101I2;0.885222!10800-110I8;0.812182!10610-108F7;0.275971!10841-111E4;0.281908!10541-107H1;0.553762!10842-111E5;0.227302!10562-108A4;0.198506!10024-101D6;0.224039!10064-101I1;0.277487!10609-108F6;0.680289!10048-101G3;0.723395!10781-110G7;0.971771!10181-103D1;0.14074!10159-103A6;0.154817!10056-101H2;0.0952093!10737-110B8;0.234346!10025-101D7;0.607706!10044-101F8;0.892784!10424-106D1;0.73098!10463-106H4;0.588909!10616-108G4;0.759197!10486-107A9;0.844828!10062-101H8;0.6111!10202-103F4;0.500773!10158-103A5;0.874452!10441-106E9;0.108982!10031-101E4;0.639629!10063-101H9;0.105486!10063-101H9;0.130456!11763-123H8;0.568116!11765-123I1;0.38043!11768-123I4;0.545352!10807-111A6;0.436803!10790-110H7;0.772871!10798-110I6;0.415499!10786-110H3;0.592127!10591-108D6;0.827166!10593-108D8;0.78323!10590-108D5;0.743641!10026-101D8;0.891279!10096-102C6;0.934886!10168-103B6;0.735869!10154-103A1;0.148407!10209-103G2;0.0829964!10061-101H7;0.821294!10027-101D9;0.809766!10043-101F7;0.283002!10783-110G9;0.291141!10028-101E1;0.409325!10060-101H6;0.976622!10203-103F5;0.341039!10059-101H5;0.719611!10047-101G2;0.800346!10029-101E2;0.839128!10058-101H4;0.8075!10418-106C4;0.887988!10492-107B6;0.689442!10694-109G1;0.229181!10797-110I5;0.333883!10057-101H3;0.134321!10100-102D1;0.53867!10055-101H1;0.867531!10204-103F6;0.936832!10191-103E2;0.993092!10563-108A5;0.66607
|name=CNhs13060_bl_f1
|name=CNhs13060_bl_f1
|tomtom_result=PPARG::RXRA#MA0065.2;3;0.00027902;0.132814;0.137522;12;CCCCTTCCCCAC;TGACCTTTGCCCTAC;-!Klf4#MA0039.1;-1;0.000434396;0.206772;0.137522;10;CCCCTTCCCCAC;CCTTCCTTTA;-!SP1#MA0079.2;0;0.000434396;0.206772;0.137522;10;CCCCTTCCCCAC;CCCCGCCCCC;+!SPI1#MA0080.1;-3;0.00127699;0.607845;0.303204;6;CCCCTTCCCCAC;CTTCCG;-!MZF1_1-4#MA0056.1;-5;0.00265107;1.26191;0.503569;6;CCCCTTCCCCAC;TCCCCA;-!Pax4#MA0068.1;9;0.00366462;1.74436;0.580079;12;CCCCTTCCCCAC;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!SPIB#MA0081.1;-4;0.00437411;2.08207;0.593472;7;CCCCTTCCCCAC;TTCCTCT;-!GCR2#MA0305.1;-2;0.00900599;4.28685;0.997635;7;CCCCTTCCCCAC;GCTTCCT;+!ZMS1#MA0441.1;-4;0.0133067;6.334;0.997635;8;CCCCTTCCCCAC;TTCCCCGCA;+!NFATC2#MA0152.1;-4;0.0138535;6.59425;0.997635;7;CCCCTTCCCCAC;TTTTCCA;+!RDR1#MA0360.1;-3;0.0146952;6.9949;0.997635;8;CCCCTTCCCCAC;GTTCCGCA;-!Ar#MA0007.1;10;0.0167921;7.99303;0.997635;12;CCCCTTCCCCAC;ATAAGAACACCCTGTACCCGCC;+!TEAD1#MA0090.1;0;0.0201047;9.56985;0.997635;12;CCCCTTCCCCAC;CACATTCCTCCG;+!ETS1#MA0098.1;-3;0.0205557;9.78451;0.997635;6;CCCCTTCCCCAC;CTTCCG;+
}}
}}

Latest revision as of 14:50, 7 September 2012

Full Name: CNhs13060_bl_f1

Motif matrix
POACGT
184.33972490967699389.2811561351997125.243881046739384.759137117090807
2252.9776378617695344.552227924426233.2522512273743882.8417821951373257
323.047234198914975300.6421169879930686.27382861422008193.66071940757917
46.488663556703665378.581172600122565.45076862037732153.10329443150346
552.370839136233520.168358166475448050.0551.084701905998
60.068.625362983069510.4850083173004087534.5135279083373
72.441867341372817517.405735398833311.90517314634276771.871123322158
80.18244378280623494321.61467392151220.0281.82678150438915
934.539966302777756369.2217632506992710.641091992967926189.2210776622623
10112.40263097823885375.498487310230116.30625485114705299.41652606909138
11427.986952591543215.94686706236282794.9908719046735464.69920765012735
12105.12791275776065244.74851150124792228.6353764945291725.112098455169793

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
PPARG::RXRA#MA0065.230.000279020.1328140.13752212CCCCTTCCCCACTGACCTTTGCCCTAC-
Klf4#MA0039.1-10.0004343960.2067720.13752210CCCCTTCCCCACCCTTCCTTTA-
SP1#MA0079.200.0004343960.2067720.13752210CCCCTTCCCCACCCCCGCCCCC+
SPI1#MA0080.1-30.001276990.6078450.3032046CCCCTTCCCCACCTTCCG-
MZF1_1-4#MA0056.1-50.002651071.261910.5035696CCCCTTCCCCACTCCCCA-
Pax4#MA0068.190.003664621.744360.58007912CCCCTTCCCCACGAAAAATTTCCCATACTCCACTCCCCCCCC+
SPIB#MA0081.1-40.004374112.082070.5934727CCCCTTCCCCACTTCCTCT-
GCR2#MA0305.1-20.009005994.286850.9976357CCCCTTCCCCACGCTTCCT+
ZMS1#MA0441.1-40.01330676.3340.9976358CCCCTTCCCCACTTCCCCGCA+
NFATC2#MA0152.1-40.01385356.594250.9976357CCCCTTCCCCACTTTTCCA+
RDR1#MA0360.1-30.01469526.99490.9976358CCCCTTCCCCACGTTCCGCA-
Ar#MA0007.1100.01679217.993030.99763512CCCCTTCCCCACATAAGAACACCCTGTACCCGCC+
TEAD1#MA0090.100.02010479.569850.99763512CCCCTTCCCCACCACATTCCTCCG+
ETS1#MA0098.1-30.02055579.784510.9976356CCCCTTCCCCACCTTCCG+
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