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MacroAPE 1083:CNhs13435 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;25.17385719722019;67.57199260930192;37.47381607484415;26.744512221352046!2;94.5161383464232;27.670852339275196;28.059703480704258;6.71748393...")
 
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110H6;0.191087!10828-111C9;0.154929!10788-110H5;0.157904!10792-110H9;0.0948685!10765-110E9;0.261531!10829-111D1;0.386!10830-111D2;0.491974!10831-111D3;0.429277!10832-111D4;0.222939!10833-111D5;0.495903!10764-110E8;0.472694!10770-110F5;0.352384!10399-106A3;0.411621!10400-106A4;0.159833!10405-106A9;0.179414!10834-111D6;0.222859!10835-111D7;0.319962!10836-111D8;0.592768!10837-111D9;0.857396!10699-109G6;0.180094!10802-111A1;0.628578!10796-110I4;0.855803!10010-101C1;0.349186!10810-111A9;0.374953!10421-106C7;0.31631!10708-109H6;0.285264!12235-129G3;0.25925!12236-129G4;0.472711!12237-129G5;0.663148!10167-103B5;0.52602!10151-102I7;0.00337053!10428-106D5;0.00569567!10795-110I3;0.503901!10805-111A4;0.247851!10052-101G7;0.399375!10189-103D9;0.467191!10589-108D4;0.284804!10425-106D2;0.845563!10427-106D4;0.725153!10702-109G9;0.72222!10432-106D9;0.865707!10496-107C1;0.264335!10718-109I7;0.356444!10011-101C2;0.167545!10053-101G8;0.370442!10686-109F2;0.881807!10084-102B3;0.329301!10012-101C3;0.0142787!10085-102B4;0.00564357!10482-107A5;0.0221279!10419-106C5;0.130861!10080-102A8;0.189946!10760-110E4;0.896413!10709-109H7;0.0732959!10710-109H8;0.191736!10703-109H1;0.0911732!10719-109I8;0.481803!10642-109A3;0.902221!10177-103C6;0.672877!10164-103B2;0.00562382!10173-103C2;0.00825386!10166-103B4;0.0147718!10083-102B2;0.0203359!10188-103D8;0.0286047!10552-107I3;0.00569066!10553-107I4;0.244414!10013-101C4;0.267055!10536-107G5;0.394045!10618-108G6;0.657991!10423-106C9;0.0348766!10785-110H2;0.0408621!12238-129G6;0.0422626!12239-129G7;0.480319!12240-129G8;0.997755!10416-106C2;0.274946!10801-110I9;0.291609!10766-110F1;0.346815!10824-111C5;0.248523!10825-111C6;0.186447!10826-111C7;0.187142!10454-106G4;0.269172!10409-106B4;0.330185!10638-108I8;0.381775!10636-108I6;0.0882859!10513-107D9;0.353927!10420-106C6;0.513425!10082-102B1;0.625254!10014-101C5;0.673876!10070-101I7;0.493304!10452-106G2;0.415051!10453-106G3;0.846354!10449-106F8;0.515575!10042-101F6;0.579106!10069-101I6;0.0134374!10193-103E4;0.369959!10631-108I1;0.00243871!10438-106E6;0.642573!10488-107B2;0.156367!10196-103E7;0.180455!10071-101I8;0.859606!10071-101I8;0.835542!10041-101F5;0.0106183!10451-106G1;0.282835!10450-106F9;0.447247!10604-108F1;0.236908!10605-108F2;0.212624!10606-108F3;0.139605!10603-108E9;0.325046!10497-107C2;0.274486!10448-106F7;0.848234!10643-109A4;0.310089!10426-106D3;0.0374282!10431-106D8;0.0599779!10197-103E8;0.0395864!10443-106F2;0.558138!10815-111B5;0.257014!10816-111B6;0.117862!10817-111B7;0.153879!10015-101C6;0.111229!10410-106B5;0.530964!10054-101G9;0.994119!10758-110E2;0.137773!10711-109H9;0.619451!10040-101F4;0.0973486!10470-106I2;0.00558826!10415-106C1;0.0362048!10198-103E9;0.0903775!10614-108G2;0.530778!10612-108F9;0.00604308!10549-107H9;0.249905!10615-108G3;0.498497!10487-107B1;0.673977!10433-106E1;0.632017!10688-109F4;0.268107!10444-106F3;0.0278765!10444-106F3;0.714972!10485-107A8;0.797647!10413-106B8;0.034701!10175-103C4;0.629237!10161-103A8;0.00391197!12131-128D7;0.00392465!10624-108H3;0.906347!10712-109I1;0.853213!10205-103F7;0.532687!10206-103F8;0.201626!10207-103F9;0.281985!10050-101G5;0.29622!10051-101G6;0.870063!10016-101C7;0.553981!10046-101G1;0.259497!10778-110G4;0.253277!10633-108I3;0.444587!10818-111B8;0.975138!10819-111B9;0.406693!10820-111C1;0.337666!10484-107A7;0.363487!10808-111A7;0.0849986!10169-103B7;0.551916!10153-102I9;0.00290728!13425-144D5;0.00711929!13433-144E4;0.405428!13437-144E8;0.59298!11904-125F5;0.457314!11905-125F6;0.912804!10039-101F3;0.492618!10791-110H8;0.00716596!10017-101C8;0.19572!10045-101F9;0.530313!10509-107D5;0.531489!10839-111E2;0.63188!10692-109F8;0.0519258!10079-102A7;0.0392807!10078-102A6;0.909039!10721-110A1;0.873713!10569-108B2;0.466288!10570-108B3;0.158501!10571-108B4;0.546298!10647-109A8;0.167274!10752-110D5;0.619353!10782-110G8;0.413821!10726-110A6;0.986595!10018-101C9;0.0781801!10086-102B5;0.523264!10182-103D2;0.433759!10165-103B3;0.00749255!10499-107C4;0.0076925!10408-106B3;0.294663!10019-101D1;0.0501473!10068-101I5;0.561834!10075-102A3;0.122675!10077-102A5;0.718136!10727-110A7;0.84702!10775-110G1;0.538881!10412-106B7;0.594368!12231-129F8;0.422011!12232-129F9;0.143592!12233-129G1;0.219259!12234-129G2;0.0354085!10414-106B9;0.040145!10170-103B8;0.704216!10183-103D3;0.00169355!10150-102I6;0.00466488!10174-103C3;0.00605918!10155-103A2;0.00913594!10038-101F2;0.0105506!10838-111E1;0.0175869!10759-110E3;0.89312!10514-107E1;0.296981!10465-106H6;0.387804!10691-109F7;0.114361!10843-111E6;0.0598758!10844-111E7;0.798372!11747-123G1;0.998659!11748-123G2;0.524411!11749-123G3;0.360549!11750-123G4;0.938411!11751-123G5;0.964681!11840-124H4;0.847047!11752-123G6;0.749185!11753-123G7;0.768211!11754-123G8;0.63756!11755-123G9;0.584029!11756-123H1;0.327418!11833-124G6;0.889436!11760-123H5;0.915333!11836-124G9;0.711529!11758-123H3;0.602508!11835-124G8;0.846344!11762-123H7;0.760582!11838-124H2;0.166971!11757-123H2;0.683762!11759-123H4;0.846581!11761-123H6;0.775386!11842-124H6;0.199602!11837-124H1;0.550282!10568-108B1;0.949418!13230-141I8;0.340626!13231-141I9;0.898252!10696-109G3;0.984135!10493-107B7;0.268399!10494-107B8;0.0430147!10850-111F4;0.0820082!10851-111F5;0.00812746!10852-111F6;0.0230067!10853-111F7;0.0379872!10854-111F8;0.0265716!10855-111F9;0.218395!10856-111G1;0.0323935!10847-111F1;0.0475719!10846-111E9;0.0964145!10848-111F2;0.0102691!10845-111E8;0.023164!10857-111G2;0.193023!10858-111G3;0.0217097!10156-103A3;0.0440633!11901-125F2;0.00557083!11902-125F3;0.121635!11903-125F4;0.220078!10689-109F5;0.0938507!10648-109A9;0.0556701!10784-110H1;0.303339!10744-110C6;0.267153!10772-110F7;0.525781!10474-106I6;0.183482!10600-108E6;0.815013!10684-109E9;0.130188!12226-129F3;0.690211!12227-129F4;0.304622!10508-107D4;0.0129228!10539-107G8;0.196163!10607-108F4;0.152445!10555-107I6;0.58752!10774-110F9;0.199606!10637-108I7;0.30408!10663-109C6;0.889319!10728-110A8;0.469163!10729-110A9;0.630375!10430-106D7;0.960958!10730-110B1;0.766157!10813-111B3;0.581644!10812-111B2;0.903841!10037-101F1;0.719569!10172-103C1;0.00665336!10163-103B1;0.00175572!10076-102A4;0.00852417!10073-102A1;0.00517158!10036-101E9;0.018322!10195-103E6;0.00728344!10277-104E7;0.00679312!10434-106E2;0.0191908!10550-107I1;0.462718!10545-107H5;0.285559!10544-107H4;0.081931!10704-109H2;0.164534!10510-107D6;0.926553!10558-107I9;0.510988!10020-101D2;0.846295!10732-110B3;0.758866!10049-101G4;0.361015!10698-109G5;0.975386!10437-106E5;0.0354922!10417-106C3;0.0604728!10035-101E8;0.0824017!10171-103B9;0.00687637!10157-103A4;0.00417029!10034-101E7;0.00659851!10072-101I9;0.00666482!10199-103F1;0.019504!10200-103F2;0.842678!10697-109G4;0.427055!10723-110A3;0.367058!10179-103C8;0.198089!10160-103A7;0.00204579!10180-103C9;0.00385792!10162-103A9;0.00307102!10021-101D3;0.0432428!10840-111E3;0.612104!10706-109H4;0.430149!10033-101E6;0.108269!10032-101E5;0.0039728!10490-107B4;0.00732189!10439-106E7;0.0358027!10022-101D4;0.179974!10176-103C5;0.657063!10469-106I1;0.00492455!10067-101I4;0.0689652!10411-106B6;0.329472!10471-106I3;0.0159194!10030-101E3;0.0247562!10475-106I7;0.199853!10787-110H4;0.605538!10477-106I9;0.895447!10695-109G2;0.9547!11771-123I7;0.812972!11772-123I8;0.44552!11773-123I9;0.747662!10093-102C3;0.634348!10442-106F1;0.942843!10442-106F1;0.895202!10201-103F3;0.905149!10639-108I9;0.561675!11843-124H7;0.154065!11841-124H5;0.111115!10693-109F9;0.0189433!10436-106E4;0.220759!10483-107A6;0.167639!10282-104F3;0.367558!10023-101D5;0.150544!10066-101I3;0.299281!10065-101I2;0.516295!10800-110I8;0.440565!10610-108F7;0.859984!10841-111E4;0.380741!10541-107H1;0.540231!10842-111E5;0.450826!10562-108A4;0.860029!10024-101D6;0.673979!10064-101I1;0.585631!10609-108F6;0.759276!10048-101G3;0.586452!10781-110G7;0.322575!10181-103D1;0.407306!10159-103A6;0.0133899!10056-101H2;0.0102049!10737-110B8;0.0573965!10025-101D7;0.831371!10044-101F8;0.434065!10424-106D1;0.635301!10463-106H4;0.397208!10616-108G4;0.0817369!10486-107A9;0.180902!10062-101H8;0.830909!10202-103F4;0.433599!10158-103A5;0.695541!10441-106E9;0.00575041!10031-101E4;0.333493!10063-101H9;0.00926774!10063-101H9;0.0208456!11763-123H8;0.293873!11765-123I1;0.908636!11768-123I4;0.828953!10807-111A6;0.84695!10790-110H7;0.796033!10798-110I6;0.75911!10786-110H3;0.776471!10591-108D6;0.25053!10593-108D8;0.517227!10590-108D5;0.309798!10026-101D8;0.397968!10096-102C6;0.868821!10168-103B6;0.29711!10154-103A1;0.00267312!10209-103G2;0.00424832!10061-101H7;0.544688!10027-101D9;0.360937!10043-101F7;0.734848!10783-110G9;0.938203!10028-101E1;0.208285!10060-101H6;0.368871!10203-103F5;0.351499!10059-101H5;0.544187!10047-101G2;0.638532!10029-101E2;0.525234!10058-101H4;0.58512!10418-106C4;0.361812!10492-107B6;0.0674739!10694-109G1;0.198862!10797-110I5;0.700731!10057-101H3;0.651781!10100-102D1;0.532402!10055-101H1;0.288758!10204-103F6;0.259105!10191-103E2;0.347482!10563-108A5;0.515467
|name=CNhs13435_bu_f1
|name=CNhs13435_bu_f1
|tomtom_result=SOK2#MA0385.1;-1;0.00290396;1.38229;1;11;CAATTGCAGTGG;ACCTGCAGGCA;+!CRZ1#MA0285.1;-2;0.00414365;1.97238;1;9;CAATTGCAGTGG;GTGGCTTAG;-!USV1#MA0413.1;2;0.00635626;3.02558;1;12;CAATTGCAGTGG;CACAAATTCAGGGGGAATTT;-!PHD1#MA0355.1;-1;0.00827117;3.93708;1;10;CAATTGCAGTGG;ACCTGCAGCA;+!YGR067C#MA0425.1;-1;0.0099266;4.72506;1;11;CAATTGCAGTGG;TGAAAAAGTGGGGT;-!Mafb#MA0117.1;-5;0.0104326;4.96593;1;7;CAATTGCAGTGG;GCTGACGG;+!ACE2#MA0267.1;-4;0.0111623;5.31327;1;7;CAATTGCAGTGG;TGCTGGT;-!PPARG::RXRA#MA0065.2;0;0.015722;7.48368;1;12;CAATTGCAGTGG;GTAGGGCAAAGGTCA;+!Pax4#MA0068.1;3;0.0176879;8.41946;1;12;CAATTGCAGTGG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!Myf#MA0055.1;3;0.0182019;8.66412;1;9;CAATTGCAGTGG;CAGCAGCTGCTG;+
}}
}}

Latest revision as of 12:15, 7 September 2012

Full Name: CNhs13435_bu_f1

Motif matrix
POACGT
125.1738571972201967.5719926093019237.4738160748441526.744512221352046
294.516138346423227.67085233927519628.0597034807042586.717483936315656
384.768677279250615.89053069314716261.3175494399553144.987420690365259
425.656063568705366.45864183389875247.90301571612463576.94645698398959
50.00.517701071636546869.4706536244657586.97582340661599
60.00.0156.964178102718250.0
71.2563369706106735155.36857562568340.339265506424156150.0
873.141428751703870.70155599587017521.13728263750772461.98391071763655
90.00.0156.964178102718250.0
1031.5607561461513638.97269298554838.7065067039365547.72422226708241
1138.13912347978147534.29233932575955672.3920010973270512.140714199850231
1226.64615262302018215.98441403605909197.1955771573033817.138034286335724

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SOK2#MA0385.1-10.002903961.38229111CAATTGCAGTGGACCTGCAGGCA+
CRZ1#MA0285.1-20.004143651.9723819CAATTGCAGTGGGTGGCTTAG-
USV1#MA0413.120.006356263.02558112CAATTGCAGTGGCACAAATTCAGGGGGAATTT-
PHD1#MA0355.1-10.008271173.93708110CAATTGCAGTGGACCTGCAGCA+
YGR067C#MA0425.1-10.00992664.72506111CAATTGCAGTGGTGAAAAAGTGGGGT-
Mafb#MA0117.1-50.01043264.9659317CAATTGCAGTGGGCTGACGG+
ACE2#MA0267.1-40.01116235.3132717CAATTGCAGTGGTGCTGGT-
PPARG::RXRA#MA0065.200.0157227.48368112CAATTGCAGTGGGTAGGGCAAAGGTCA+
Pax4#MA0068.130.01768798.41946112CAATTGCAGTGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
Myf#MA0055.130.01820198.6641219CAATTGCAGTGGCAGCAGCTGCTG+
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