FFCP PHASE1:Mm9::chr3:88990668..88990679,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr3:88990668..88990679,+ | |id=chr3:88990668..88990679,+ | ||
|ontology_enrichment_celltype=CL:0000333!4.73e-14!10;CL:0000095!4.73e-14!10;CL:0000243!4.73e-14!10;CL:0000123!4.73e-14!10;CL:0000125!4.73e-14!10;CL:0000030!4.73e-14!10;CL:0000339!4.73e-14!10;CL:0000128!1.72e-12!6;CL:0000126!1.72e-12!6;CL:0000127!1.72e-12!6;CL:0002453!2.92e-09!8;CL:0002604!3.73e-07!2;CL:0002605!3.73e-07!2;CL:0000325!4.26e-07!2;CL:0000217!4.26e-07!2;CL:0000328!4.26e-07!2;CL:0002573!4.26e-07!2;CL:0002376!4.26e-07!2;CL:0000218!4.26e-07!2;CL:0000692!4.26e-07!2;CL:0002377!4.26e-07!2;CL:0002375!4.26e-07!2 | |ontology_enrichment_celltype=CL:0000333!4.73e-14!10;CL:0000095!4.73e-14!10;CL:0000243!4.73e-14!10;CL:0000123!4.73e-14!10;CL:0000125!4.73e-14!10;CL:0000030!4.73e-14!10;CL:0000339!4.73e-14!10;CL:0000128!1.72e-12!6;CL:0000126!1.72e-12!6;CL:0000127!1.72e-12!6;CL:0002453!2.92e-09!8;CL:0002604!3.73e-07!2;CL:0002605!3.73e-07!2;CL:0000325!4.26e-07!2;CL:0000217!4.26e-07!2;CL:0000328!4.26e-07!2;CL:0002573!4.26e-07!2;CL:0002376!4.26e-07!2;CL:0000218!4.26e-07!2;CL:0000692!4.26e-07!2;CL:0002377!4.26e-07!2;CL:0002375!4.26e-07!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.17e-39,10;CL:0000095,1.17e-39,10;CL:0000243,1.17e-39,10;CL:0000123,1.17e-39,10;CL:0000125,1.17e-39,10;CL:0000030,1.17e-39,10;CL:0000339,1.17e-39,10;CL:0000128,8.72e-30,6;CL:0000126,8.72e-30,6;CL:0000127,8.72e-30,6;CL:0002605,3.06e-23,2;CL:0002604,3.06e-23,2;CL:0000217,5.10e-23,2;CL:0000328,5.10e-23,2;CL:0002573,5.10e-23,2;CL:0002376,5.10e-23,2;CL:0000218,5.10e-23,2;CL:0000692,5.10e-23,2;CL:0002377,5.10e-23,2;CL:0002375,5.10e-23,2;CL:0002453,1.72e-22,8;CL:0000215,1.04e-15,3;CL:0000219,5.73e-10,54;CL:0002319,2.42e-09,43;CL:0000221,3.94e-09,44;CL:0000133,3.94e-09,44;CL:0002603,9.80e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!9.64e-10!9;UBERON:0000019!9.64e-10!9;UBERON:0000047!9.64e-10!9;UBERON:0004088!9.64e-10!9;UBERON:0002104!9.64e-10!9;UBERON:0001456!9.64e-10!9;UBERON:0003072!9.64e-10!9;UBERON:0003071!9.64e-10!9;UBERON:0004128!9.64e-10!9;UBERON:0001444!7.36e-08!11;UBERON:0000020!3.74e-07!12;UBERON:0001032!3.74e-07!12;UBERON:0004456!3.74e-07!12 | |ontology_enrichment_uberon=UBERON:0000970!9.64e-10!9;UBERON:0000019!9.64e-10!9;UBERON:0000047!9.64e-10!9;UBERON:0004088!9.64e-10!9;UBERON:0002104!9.64e-10!9;UBERON:0001456!9.64e-10!9;UBERON:0003072!9.64e-10!9;UBERON:0003071!9.64e-10!9;UBERON:0004128!9.64e-10!9;UBERON:0001444!7.36e-08!11;UBERON:0000020!3.74e-07!12;UBERON:0001032!3.74e-07!12;UBERON:0004456!3.74e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.46e-07,7;UBERON:0003022,2.46e-07,7;UBERON:0002421,2.46e-07,7;UBERON:0000349,2.46e-07,7;UBERON:0002600,2.46e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,3.07560655828261,2.91644848611425,0.419959264876088,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,1.0165335962074,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,1.06016670666458,4.45872204630035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,1.03481348295606,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.17230640686684,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,3.07560655828261,2.91644848611425,0.419959264876088,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,1.0165335962074,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,1.06016670666458,4.45872204630035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,1.03481348295606,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.17230640686684,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:88990668..88990679,+ | |short_description=p@chr3:88990668..88990679,+ | ||
}} | }} |
Revision as of 12:24, 14 November 2012
Short description: | p@chr3:88990668..88990679, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:88990668..88990679, + |
Coexpression cluster: | MCL_coexpression_mm9:3425 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.17e-39 | 10 |
neuron associated cell | 1.17e-39 | 10 |
glial cell (sensu Vertebrata) | 1.17e-39 | 10 |
neuron associated cell (sensu Vertebrata) | 1.17e-39 | 10 |
glial cell | 1.17e-39 | 10 |
glioblast | 1.17e-39 | 10 |
glioblast (sensu Vertebrata) | 1.17e-39 | 10 |
oligodendrocyte | 8.72e-30 | 6 |
macroglial cell | 8.72e-30 | 6 |
astrocyte | 8.72e-30 | 6 |
astrocyte of the cerebral cortex | 3.06e-23 | 2 |
astrocyte of the hippocampus | 3.06e-23 | 2 |
insulating cell | 5.10e-23 | 2 |
myelin accumulating cell | 5.10e-23 | 2 |
Schwann cell | 5.10e-23 | 2 |
non-myelinating Schwann cell | 5.10e-23 | 2 |
myelinating Schwann cell;;Schwann cell | 5.10e-23 | 2 |
terminal Schwann cell | 5.10e-23 | 2 |
immature Schwann cell | 5.10e-23 | 2 |
Schwann cell precursor | 5.10e-23 | 2 |
oligodendrocyte precursor cell | 1.72e-22 | 8 |
barrier cell | 1.04e-15 | 3 |
motile cell | 5.73e-10 | 54 |
neural cell | 2.42e-09 | 43 |
ectodermal cell | 3.94e-09 | 44 |
neurectodermal cell | 3.94e-09 | 44 |
astrocyte of the cerebellum | 9.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.46e-07 | 7 |
lobe parts of cerebral cortex | 2.46e-07 | 7 |
hippocampal formation | 2.46e-07 | 7 |
limbic system | 2.46e-07 | 7 |
limbic lobe | 2.46e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.