FFCP PHASE1:Mm9::chr7:148265683..148265705,+: Difference between revisions
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|id=chr7:148265683..148265705,+ | |id=chr7:148265683..148265705,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.98e-07!9;CL:0002251!1.98e-07!9 | |ontology_enrichment_celltype=CL:0002563!1.98e-07!9;CL:0002251!1.98e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.20e-09,9;CL:0002251,1.20e-09,9;CL:0002076,1.29e-08,15;CL:0000239,1.20e-07,6;CL:0000677,1.20e-07,6;CL:0000584,1.20e-07,6;CL:0000066,8.13e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.55e-19!43;UBERON:0005409!1.16e-18!59;UBERON:0004119!1.39e-13!130;UBERON:0000925!1.39e-13!130;UBERON:0006595!1.39e-13!130;UBERON:0001007!8.64e-13!128;UBERON:0001555!8.64e-13!128;UBERON:0007026!8.64e-13!128;UBERON:0004921!9.64e-12!126;UBERON:0004185!9.64e-12!126;UBERON:0000344!1.06e-11!15;UBERON:0001242!2.72e-10!13;UBERON:0000060!2.72e-10!13;UBERON:0001262!2.72e-10!13;UBERON:0004786!2.72e-10!13;UBERON:0004923!5.81e-08!24;UBERON:0003350!1.98e-07!9;UBERON:0004808!1.98e-07!9;UBERON:0001277!1.98e-07!9;UBERON:0000485!4.48e-07!11 | |ontology_enrichment_uberon=UBERON:0000160!9.55e-19!43;UBERON:0005409!1.16e-18!59;UBERON:0004119!1.39e-13!130;UBERON:0000925!1.39e-13!130;UBERON:0006595!1.39e-13!130;UBERON:0001007!8.64e-13!128;UBERON:0001555!8.64e-13!128;UBERON:0007026!8.64e-13!128;UBERON:0004921!9.64e-12!126;UBERON:0004185!9.64e-12!126;UBERON:0000344!1.06e-11!15;UBERON:0001242!2.72e-10!13;UBERON:0000060!2.72e-10!13;UBERON:0001262!2.72e-10!13;UBERON:0004786!2.72e-10!13;UBERON:0004923!5.81e-08!24;UBERON:0003350!1.98e-07!9;UBERON:0004808!1.98e-07!9;UBERON:0001277!1.98e-07!9;UBERON:0000485!4.48e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.84e-23,47;UBERON:0000160,8.69e-23,31;UBERON:0000344,1.61e-15,15;UBERON:0001242,1.40e-13,13;UBERON:0001262,1.40e-13,13;UBERON:0004786,1.40e-13,13;UBERON:0004923,3.81e-11,24;UBERON:0004119,9.09e-11,118;UBERON:0000925,9.09e-11,118;UBERON:0006595,9.09e-11,118;UBERON:0001007,6.36e-10,116;UBERON:0001555,6.36e-10,116;UBERON:0007026,6.36e-10,116;UBERON:0003350,1.20e-09,9;UBERON:0004808,1.20e-09,9;UBERON:0001277,1.20e-09,9;UBERON:0004921,7.96e-09,114;UBERON:0000485,2.38e-07,11;UBERON:0007023,5.59e-07,51 | |||
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| ||
|short_description=p2@Pkp3 | |short_description=p2@Pkp3 | ||
}} | }} |
Revision as of 19:10, 14 November 2012
Short description: | p2@Pkp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pkp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1297 |
Association with transcript: | 4bp_to_ENSMUST00000160869_5end |
EntrezGene: | Pkp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.20e-09 | 9 |
epithelial cell of alimentary canal | 1.20e-09 | 9 |
endo-epithelial cell | 1.29e-08 | 15 |
brush border epithelial cell | 1.20e-07 | 6 |
gut absorptive cell | 1.20e-07 | 6 |
enterocyte | 1.20e-07 | 6 |
epithelial cell | 8.13e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 6.84e-23 | 47 |
intestine | 8.69e-23 | 31 |
mucosa | 1.61e-15 | 15 |
intestinal mucosa | 1.40e-13 | 13 |
wall of intestine | 1.40e-13 | 13 |
gastrointestinal system mucosa | 1.40e-13 | 13 |
organ component layer | 3.81e-11 | 24 |
endoderm-derived structure | 9.09e-11 | 118 |
endoderm | 9.09e-11 | 118 |
presumptive endoderm | 9.09e-11 | 118 |
digestive system | 6.36e-10 | 116 |
digestive tract | 6.36e-10 | 116 |
primitive gut | 6.36e-10 | 116 |
epithelium of mucosa | 1.20e-09 | 9 |
gastrointestinal system epithelium | 1.20e-09 | 9 |
intestinal epithelium | 1.20e-09 | 9 |
subdivision of digestive tract | 7.96e-09 | 114 |
simple columnar epithelium | 2.38e-07 | 11 |
adult organism | 5.59e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.