FFCP PHASE1:Mm9::chr5:145865342..145865361,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56443|HGNC=|MCL_coexpression_id=112|UniProt=|association_with_transcript=200bp_to_ENSMUST00000142276_5end|description=CAGE_peak_6_at_Arpc1a_5end|id=chr5:145865342..145865361,+|ontology_enrichment_celltype=CL:0000107!2.07e-07!9;CL:0000630!2.34e-07!3;CL:0000473!5.81e-07!3;CL:0000627!5.81e-07!3;CL:0000682!5.81e-07!3|ontology_enrichment_celltype_v019_2=CL:0000217,4.23e-36,2;CL:0000328,4.23e-36,2;CL:0002573,4.23e-36,2;CL:0002376,4.23e-36,2;CL:0000218,4.23e-36,2;CL:0000692,4.23e-36,2;CL:0002377,4.23e-36,2;CL:0002375,4.23e-36,2;CL:0000215,1.74e-24,3;CL:0000333,4.34e-08,10;CL:0000095,4.34e-08,10;CL:0000243,4.34e-08,10;CL:0000123,4.34e-08,10;CL:0000125,4.34e-08,10;CL:0000030,4.34e-08,10;CL:0000339,4.34e-08,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!7.68e-11!11;UBERON:0000473!6.83e-10!14;UBERON:0003135!4.18e-09!15;UBERON:0003101!2.03e-08!16;UBERON:0000079!2.03e-08!16;UBERON:0004176!8.19e-08!17;UBERON:0009196!8.19e-08!17;UBERON:0009117!8.19e-08!17;UBERON:0002410!2.07e-07!9;UBERON:0000991!2.82e-07!18;UBERON:0005564!2.82e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0003199,2.59e-18,1;UBERON:0001962,7.56e-10,2;UBERON:0001961,7.56e-10,2;UBERON:0001744,7.56e-10,2;UBERON:0000010,1.94e-07,11;UBERON:0002465,5.46e-07,3|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,1.14704640533585,0.57423196411502,0.430761996159075,0.861884930743556,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.441737081903227,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,3.55913108665965,4.45872204630035,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0.445597348164788,0.849229592366497,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0.299033092087958,0.330916980914195,0,0.258319646955462,0,0,1.17183946359555,1.25831213310853,0.724752362478018,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p6@Arpc1a}} | ||
|EntrezGene=56443 | |||
|HGNC= | |||
|MCL_coexpression_id=112 | |||
|UniProt= | |||
|association_with_transcript=200bp_to_ENSMUST00000142276_5end | |||
|description=CAGE_peak_6_at_Arpc1a_5end | |||
|id=chr5:145865342..145865361,+ | |||
|ontology_enrichment_celltype=CL:0000107!2.07e-07!9;CL:0000630!2.34e-07!3;CL:0000473!5.81e-07!3;CL:0000627!5.81e-07!3;CL:0000682!5.81e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,4.23e-36,2;CL:0000328,4.23e-36,2;CL:0002573,4.23e-36,2;CL:0002376,4.23e-36,2;CL:0000218,4.23e-36,2;CL:0000692,4.23e-36,2;CL:0002377,4.23e-36,2;CL:0002375,4.23e-36,2;CL:0000215,1.74e-24,3;CL:0000333,4.34e-08,10;CL:0000095,4.34e-08,10;CL:0000243,4.34e-08,10;CL:0000123,4.34e-08,10;CL:0000125,4.34e-08,10;CL:0000030,4.34e-08,10;CL:0000339,4.34e-08,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!7.68e-11!11;UBERON:0000473!6.83e-10!14;UBERON:0003135!4.18e-09!15;UBERON:0003101!2.03e-08!16;UBERON:0000079!2.03e-08!16;UBERON:0004176!8.19e-08!17;UBERON:0009196!8.19e-08!17;UBERON:0009117!8.19e-08!17;UBERON:0002410!2.07e-07!9;UBERON:0000991!2.82e-07!18;UBERON:0005564!2.82e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003199,2.59e-18,1;UBERON:0001962,7.56e-10,2;UBERON:0001961,7.56e-10,2;UBERON:0001744,7.56e-10,2;UBERON:0000010,1.94e-07,11;UBERON:0002465,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,1.14704640533585,0.57423196411502,0.430761996159075,0.861884930743556,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.441737081903227,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,3.55913108665965,4.45872204630035,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0.445597348164788,0.849229592366497,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0.299033092087958,0.330916980914195,0,0.258319646955462,0,0,1.17183946359555,1.25831213310853,0.724752362478018,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p6@Arpc1a | |||
}} |
Revision as of 07:00, 14 September 2013
Short description: | p6@Arpc1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Arpc1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:112 |
Association with transcript: | 200bp_to_ENSMUST00000142276_5end |
EntrezGene: | Arpc1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 4.23e-36 | 2 |
myelin accumulating cell | 4.23e-36 | 2 |
Schwann cell | 4.23e-36 | 2 |
non-myelinating Schwann cell | 4.23e-36 | 2 |
myelinating Schwann cell;;Schwann cell | 4.23e-36 | 2 |
terminal Schwann cell | 4.23e-36 | 2 |
immature Schwann cell | 4.23e-36 | 2 |
Schwann cell precursor | 4.23e-36 | 2 |
barrier cell | 1.74e-24 | 3 |
migratory neural crest cell | 4.34e-08 | 10 |
neuron associated cell | 4.34e-08 | 10 |
glial cell (sensu Vertebrata) | 4.34e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 4.34e-08 | 10 |
glial cell | 4.34e-08 | 10 |
glioblast | 4.34e-08 | 10 |
glioblast (sensu Vertebrata) | 4.34e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
egg chamber | 2.59e-18 | 1 |
gut-associated lymphoid tissue | 7.56e-10 | 2 |
mucosa-associated lymphoid tissue | 7.56e-10 | 2 |
lymphoid tissue | 7.56e-10 | 2 |
peripheral nervous system | 1.94e-07 | 11 |
lymphoid system | 5.46e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.