Personal tools

FFCP PHASE1:Mm9::chr17:27693887..27693908,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=111241,15361|HGNC=|MCL_coexpression_id=3088|UniProt=P17095|association_with_transcript=274bp_to_ENSMUST00000117254,ENSMUST00000118570_5end|description=CAGE_peak_2_at_Hmga1-rs1_5end,CAGE_peak_2_at_Hmga1_5end|id=chr17:27693887..27693908,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.74e-09!16;UBERON:0001474!2.37e-08!22;UBERON:0004765!2.37e-08!22;UBERON:0001434!2.37e-08!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.74e-09,16;UBERON:0001474,2.36e-08,22;UBERON:0004765,2.36e-08,22;UBERON:0001434,2.36e-08,22|phase1_expression=4.64431656603902,2.09385244583617,3.63999391511629,0.60492842261366,1.50268718983904,4.53274034162102,5.37309073369709,4.26106967357202,5.490760163915,7.2560003159818,7.19115466547121,9.01425396647301,3.42401459862411,3.3219752919219,8.99396356902289,11.3386149738303,4.19737126876888,31.3884854531446,26.7373145531191,27.1609377150739,6.03807360072595,5.95745707205312,5.74639536105658,7.35965144849671,6.8822784320151,4.59385571292016,6.46142994238612,5.60225204983311,2.28028103347649,3.02436155711917,6.87364583031445,5.08024538767705,3.07532393792285,0,10.1098066912946,6.64938581433969,5.71674197534634,5.02237956884289,17.1893775795236,10.9939986234498,1.76469446409304,3.41522742479223,4.85510353031154,5.03587271902309,4.76471576731718,3.30384153891027,16.4302182313088,2.8343270329458,5.05278220289285,3.4997381833371,5.03951117851305,7.18762821824858,33.3887386054895,1.45072428402269,1.00828139742739,4.63066984864705,4.01146815914259,4.12537673821954,8.49729135610311,5.28990979272033,5.07065122804943,9.82649143000483,3.55717918444456,111.137615084253,137.452424396809,142.09602298922,47.6364175724264,26.5110630671873,3.00699875694585,2.8351247049655,2.73422449756797,16.2821061110168,11.4851641294839,3.79721477566358,5.46319184803947,3.67687514644008,24.2254938198655,18.0039146700115,16.7431121249305,7.12185953743047,8.59983849862651,7.29278718779464,16.1926139420801,10.1297269805702,13.7518422999129,12.0797720044204,10.8202477407318,8.94717339961443,27.1099772132799,19.1951762671235,2.6087803983151,2.58127163094416,4.75979933595425,1.61910957491345,0.649776417447669,1.34408066129201,5.33688796500657,2.72688516124892,3.11743205523443,2.12003744706204,1.54927761754349,1.28326477414318,0,7.11066703153331,6.061749148314,7.85415582972806,7.58286667522175,2.62622923353838,25.3759125974228,5.19547486726887,5.55153045651635,6.39377504455497,3.68984795609694,5.72746034099966,6.34979018532806,3.39299796590124,1.97755974187499,4.77177877835708,15.9229899350977,9.22071044700232,9.93786833071771,8.24287930329878,5.59175283654366,16.9812862266697,14.6612694769419,5.62005521458901,64.1010916106673,57.5906621753671,66.5847989862859,19.9221550408414,7.77751024791665,6.40837195775608,9.90798625095976,8.43861009190091,23.0644729461112,16.8730913590468,5.49932564791708,8.8328949133166,2.27450482590307,10.1012090825508,5.59517904739626,5.51765050640335,9.18316862007281,7.9873553452929,15.7844678031081,9.35230158079403,9.18276900685342,8.2785078636485,7.76044774558232,6.05139456537022,5.98233822157426,3.72632745126877,3.61461423993277,6.61679116392116,4.32142486456681,4.97585667046233,41.4305780514809,53.7857125869755,51.7177568899979,5.59239585845855,5.8631514995274,7.56260658136262,9.70653415899362,6.88674811115913,7.25055430570678,5.58081467400979,10.9992094573844,8.17357396570186,13.000228143165,8.20837320395476,14.5113169087082,11.2573990317506,11.1970558798436,10.6023070820694,8.20130799400096,6.79170441703277,0.660837565967596,4.23120906661671,4.69234151177515,4.41249676534833,4.89696353023955,8.26902450955704,6.89371935919098,7.22857379227725,4.74529061544512,5.43506550589236,4.77536896720512,9.15199771389294,5.65395852645448,3.59527763461689,4.10662294761919,3.58454291857861,7.96605184002943,5.02693455482807,4.50830942692322,4.68398054044223,5.43066964069352,6.31222379012867,3.16182685621286,1.91893192373483,1.41298855057237,0.987177311374404,0.592905254174298,5.83957870006329,4.52085688760367,7.87017393346988,6.6943840058206,7.71766911207734,7.38414970166117,8.63088412352432,14.4300351829781,7.96228098245436,15.814502718009,9.67566463938109,6.86482880852033,5.30415643688935,3.22915344339442,0.482443521363367,6.46636165583116,4.35830247072115,7.98528384565927,4.92260748748046,4.69380496577004,5.69521275302174,5.71304738126433,6.63454402716516,4.09851374676097,5.09368786192182,3.6674596791222,4.09658286789345,5.52591941970866,4.77341893318988,64.8402520938871,45.1441717569529,0.491764273019036,3.31124095565679,21.9954308283275,15.9407893765396,8.0328123234571,8.83648245215305,3.78609863299508,4.29482618726302,3.23135096599198,7.40803273652911,4.01037613348309,3.96307143104365,5.66734982344852,3.21481443702443,2.76701444562566,8.35435422696698,2.55492153374884,5.34196811001766,6.8412522928502,3.46437258242324,2.65490276679926,6.06951590387454,6.04647113929502,3.39489143560617,5.90603785761546,3.3817866273832,5.94385074286909,3.99887102425256,3.56497378384721,4.42451461110142,2.10837217149998,3.09406629744561,2.38307724027652,5.04171063287669,7.89087971074802,6.21577401591618,3.72414490648775,4.28085162244969,4.27827453565514,6.08929898229199,3.28540391289194,0.847328283455281,0.882113592219848,5.93590510589328,6.78150592122803,6.03129249281559,5.37175548014114,5.9090723908222,5.53813589596716,22.2510362412612,14.8657666294132,7.84270098260245,8.51894825900674,6.59289599516419,11.072232445403,10.066239621087,56.9427740479415,51.0822800981352,60.9461884477509,5.72802370809068,5.06137589729817,5.89626454667861,3.78018692876304,4.80903080833278,3.27543845619266,5.52943820177765,5.70308844504818,2.09404753587224,5.05498395837992,6.83473244395618,1.12738587736838,2.69129782879162,1.32366792365678,3.11121901350476,2.19571699912143,1.85851738039856,2.46450201156083,2.604087696879,4.40409246587986,1.93267296660805,1.15212002503146,6.00421129193539,9.12263468805739,6.26536838705446,4.28738715826724,7.87717460936918,4.96703386953162,6.73094517311826,5.1691334511102,6.86571859647404,5.25826965919499,3.52891647978942,6.52967800956341,4.81059208201647,5.02570679380746,5.44152920676507,2.88581739386284,8.70224409111914,4.02923079273788,3.86379188064381,3.00291960721891,1.83151624267265,6.00231461421384,1.50471631210609,12.4245405375755,16.5717085142584,12.6037012956667,9.96748457593388,10.9613203163303,13.5970901530146,8.77529250301348,9.00642406448441,7.70342095273148,13.4617681055473,6.43481555021895,3.99024873401031,4.09760653809922,5.10524105843418,7.1268475293514,6.98605332110054,4.4449345560323,5.76898160268904,6.73930340142812,5.55933865880354,5.83002389747551,8.11093267960128,5.52484894072306,5.6342134116285,4.93945033018274,4.28664322154766,5.33067899346335,6.36600427530227,5.35711671044299,6.03515572551029,6.51451579532289,5.32427418478012,5.24559617884106,3.0522747492789,5.55245344450451,5.24610568928394,3.84148743032822,5.5244639401947,6.24698923690964,5.05028044491965,5.81311588808453,5.61475549540712,4.50154147486658,7.12709469455443,6.36591816237767,10.7418548513317,7.48581147025307,10.09893954027,6.88637995447836,9.26483960301965,6.95603506861264|short_description=p2@Hmga1-rs1,p2@Hmga1}}
|EntrezGene=111241,15361
|HGNC=
|MCL_coexpression_id=3088
|UniProt=P17095
|association_with_transcript=274bp_to_ENSMUST00000117254,ENSMUST00000118570_5end
|description=CAGE_peak_2_at_Hmga1-rs1_5end,CAGE_peak_2_at_Hmga1_5end
|id=chr17:27693887..27693908,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002371!3.74e-09!16;UBERON:0001474!2.37e-08!22;UBERON:0004765!2.37e-08!22;UBERON:0001434!2.37e-08!22
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.74e-09,16;UBERON:0001474,2.36e-08,22;UBERON:0004765,2.36e-08,22;UBERON:0001434,2.36e-08,22
|phase1_expression=4.64431656603902,2.09385244583617,3.63999391511629,0.60492842261366,1.50268718983904,4.53274034162102,5.37309073369709,4.26106967357202,5.490760163915,7.2560003159818,7.19115466547121,9.01425396647301,3.42401459862411,3.3219752919219,8.99396356902289,11.3386149738303,4.19737126876888,31.3884854531446,26.7373145531191,27.1609377150739,6.03807360072595,5.95745707205312,5.74639536105658,7.35965144849671,6.8822784320151,4.59385571292016,6.46142994238612,5.60225204983311,2.28028103347649,3.02436155711917,6.87364583031445,5.08024538767705,3.07532393792285,0,10.1098066912946,6.64938581433969,5.71674197534634,5.02237956884289,17.1893775795236,10.9939986234498,1.76469446409304,3.41522742479223,4.85510353031154,5.03587271902309,4.76471576731718,3.30384153891027,16.4302182313088,2.8343270329458,5.05278220289285,3.4997381833371,5.03951117851305,7.18762821824858,33.3887386054895,1.45072428402269,1.00828139742739,4.63066984864705,4.01146815914259,4.12537673821954,8.49729135610311,5.28990979272033,5.07065122804943,9.82649143000483,3.55717918444456,111.137615084253,137.452424396809,142.09602298922,47.6364175724264,26.5110630671873,3.00699875694585,2.8351247049655,2.73422449756797,16.2821061110168,11.4851641294839,3.79721477566358,5.46319184803947,3.67687514644008,24.2254938198655,18.0039146700115,16.7431121249305,7.12185953743047,8.59983849862651,7.29278718779464,16.1926139420801,10.1297269805702,13.7518422999129,12.0797720044204,10.8202477407318,8.94717339961443,27.1099772132799,19.1951762671235,2.6087803983151,2.58127163094416,4.75979933595425,1.61910957491345,0.649776417447669,1.34408066129201,5.33688796500657,2.72688516124892,3.11743205523443,2.12003744706204,1.54927761754349,1.28326477414318,0,7.11066703153331,6.061749148314,7.85415582972806,7.58286667522175,2.62622923353838,25.3759125974228,5.19547486726887,5.55153045651635,6.39377504455497,3.68984795609694,5.72746034099966,6.34979018532806,3.39299796590124,1.97755974187499,4.77177877835708,15.9229899350977,9.22071044700232,9.93786833071771,8.24287930329878,5.59175283654366,16.9812862266697,14.6612694769419,5.62005521458901,64.1010916106673,57.5906621753671,66.5847989862859,19.9221550408414,7.77751024791665,6.40837195775608,9.90798625095976,8.43861009190091,23.0644729461112,16.8730913590468,5.49932564791708,8.8328949133166,2.27450482590307,10.1012090825508,5.59517904739626,5.51765050640335,9.18316862007281,7.9873553452929,15.7844678031081,9.35230158079403,9.18276900685342,8.2785078636485,7.76044774558232,6.05139456537022,5.98233822157426,3.72632745126877,3.61461423993277,6.61679116392116,4.32142486456681,4.97585667046233,41.4305780514809,53.7857125869755,51.7177568899979,5.59239585845855,5.8631514995274,7.56260658136262,9.70653415899362,6.88674811115913,7.25055430570678,5.58081467400979,10.9992094573844,8.17357396570186,13.000228143165,8.20837320395476,14.5113169087082,11.2573990317506,11.1970558798436,10.6023070820694,8.20130799400096,6.79170441703277,0.660837565967596,4.23120906661671,4.69234151177515,4.41249676534833,4.89696353023955,8.26902450955704,6.89371935919098,7.22857379227725,4.74529061544512,5.43506550589236,4.77536896720512,9.15199771389294,5.65395852645448,3.59527763461689,4.10662294761919,3.58454291857861,7.96605184002943,5.02693455482807,4.50830942692322,4.68398054044223,5.43066964069352,6.31222379012867,3.16182685621286,1.91893192373483,1.41298855057237,0.987177311374404,0.592905254174298,5.83957870006329,4.52085688760367,7.87017393346988,6.6943840058206,7.71766911207734,7.38414970166117,8.63088412352432,14.4300351829781,7.96228098245436,15.814502718009,9.67566463938109,6.86482880852033,5.30415643688935,3.22915344339442,0.482443521363367,6.46636165583116,4.35830247072115,7.98528384565927,4.92260748748046,4.69380496577004,5.69521275302174,5.71304738126433,6.63454402716516,4.09851374676097,5.09368786192182,3.6674596791222,4.09658286789345,5.52591941970866,4.77341893318988,64.8402520938871,45.1441717569529,0.491764273019036,3.31124095565679,21.9954308283275,15.9407893765396,8.0328123234571,8.83648245215305,3.78609863299508,4.29482618726302,3.23135096599198,7.40803273652911,4.01037613348309,3.96307143104365,5.66734982344852,3.21481443702443,2.76701444562566,8.35435422696698,2.55492153374884,5.34196811001766,6.8412522928502,3.46437258242324,2.65490276679926,6.06951590387454,6.04647113929502,3.39489143560617,5.90603785761546,3.3817866273832,5.94385074286909,3.99887102425256,3.56497378384721,4.42451461110142,2.10837217149998,3.09406629744561,2.38307724027652,5.04171063287669,7.89087971074802,6.21577401591618,3.72414490648775,4.28085162244969,4.27827453565514,6.08929898229199,3.28540391289194,0.847328283455281,0.882113592219848,5.93590510589328,6.78150592122803,6.03129249281559,5.37175548014114,5.9090723908222,5.53813589596716,22.2510362412612,14.8657666294132,7.84270098260245,8.51894825900674,6.59289599516419,11.072232445403,10.066239621087,56.9427740479415,51.0822800981352,60.9461884477509,5.72802370809068,5.06137589729817,5.89626454667861,3.78018692876304,4.80903080833278,3.27543845619266,5.52943820177765,5.70308844504818,2.09404753587224,5.05498395837992,6.83473244395618,1.12738587736838,2.69129782879162,1.32366792365678,3.11121901350476,2.19571699912143,1.85851738039856,2.46450201156083,2.604087696879,4.40409246587986,1.93267296660805,1.15212002503146,6.00421129193539,9.12263468805739,6.26536838705446,4.28738715826724,7.87717460936918,4.96703386953162,6.73094517311826,5.1691334511102,6.86571859647404,5.25826965919499,3.52891647978942,6.52967800956341,4.81059208201647,5.02570679380746,5.44152920676507,2.88581739386284,8.70224409111914,4.02923079273788,3.86379188064381,3.00291960721891,1.83151624267265,6.00231461421384,1.50471631210609,12.4245405375755,16.5717085142584,12.6037012956667,9.96748457593388,10.9613203163303,13.5970901530146,8.77529250301348,9.00642406448441,7.70342095273148,13.4617681055473,6.43481555021895,3.99024873401031,4.09760653809922,5.10524105843418,7.1268475293514,6.98605332110054,4.4449345560323,5.76898160268904,6.73930340142812,5.55933865880354,5.83002389747551,8.11093267960128,5.52484894072306,5.6342134116285,4.93945033018274,4.28664322154766,5.33067899346335,6.36600427530227,5.35711671044299,6.03515572551029,6.51451579532289,5.32427418478012,5.24559617884106,3.0522747492789,5.55245344450451,5.24610568928394,3.84148743032822,5.5244639401947,6.24698923690964,5.05028044491965,5.81311588808453,5.61475549540712,4.50154147486658,7.12709469455443,6.36591816237767,10.7418548513317,7.48581147025307,10.09893954027,6.88637995447836,9.26483960301965,6.95603506861264
|short_description=p2@Hmga1-rs1,p2@Hmga1
}}

Revision as of 13:53, 13 September 2013

Short description:p2@Hmga1-rs1, p2@Hmga1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Hmga1-rs1_5end, CAGE_peak_2_at_Hmga1_5end
Coexpression cluster:MCL_coexpression_mm9:3088
Association with transcript: 274bp_to_ENSMUST00000117254, ENSMUST00000118570_5end
EntrezGene:111241,15361
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Hmga1-rs1p2@Hmga1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.01
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.34
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.39
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A426.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A627.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.39
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7111.14
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7137.45
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2142.10
Mouse Microglia, donor1.CNhs12629.11718-123C847.64
Mouse Microglia, donor2.CNhs12634.11736-123E826.51
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.74
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.95
Mouse Schwann, donor1.CNhs12507.11728-123D927.11
Mouse Schwann, donor2.CNhs12573.11746-123F919.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H925.38
adrenal gland, adult.CNhs10508.49-24D75.20
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C16.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.39
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H14.77
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F59.22
bone (os femoris), neonate N16.CNhs11225.1525-43A69.94
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I214.66
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C764.10
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D157.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D466.58
corpora quadrigemina, adult.CNhs10501.16-22A419.92
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D59.91
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F223.06
diencephalon, neonate N30.CNhs11201.1388-42B216.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.83
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G410.10
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C99.18
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C615.78
eyeball, neonate N01.CNhs11140.1532-43E79.35
eyeball, neonate N02.CNhs11205.1551-44G89.18
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E27.76
forelimb, embryo E12.CNhs10600.359-14H26.05
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C841.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D253.79
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D551.72
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I97.56
heart, embryo E14.CNhs10597.403-26D49.71
heart, embryo E15.CNhs11017.431-16C86.89
heart, embryo E16.CNhs11021.457-17C67.25
heart, embryo E17.CNhs11025.479-18E55.58
heart, embryo E18.CNhs11030.1283-20G311.00
heart, neonate N00.CNhs11213.639-21E38.17
heart, neonate N03.CNhs11221.1349-25I213.00
heart, neonate N10.CNhs11118.749-24G18.21
heart, neonate N16.CNhs11209.782-15G114.51
heart, neonate N20.CNhs11127.821-26I611.26
heart, neonate N25.CNhs11196.1351-25D311.20
heart, neonate N30.CNhs11202.1390-42D210.60
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H48.27
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F77.23
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E95.44
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F29.15
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G76.31
kidney, neonate N10.CNhs11206.758-6D53.16
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E17.87
liver, embryo E15.CNhs10520.433-16D76.69
liver, embryo E16.CNhs10523.462-17F57.72
liver, embryo E17.CNhs10510.481-18A37.38
liver, embryo E18.CNhs10579.499-43G48.63
liver, neonate N00.CNhs11117.641-24F414.43
liver, neonate N03.CNhs11123.1345-25G27.96
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H29.68
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F87.99
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C66.63
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A44.10
lung, neonate N25.CNhs11119.1359-25C75.53
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A164.84
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A145.14
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C222.00
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.03
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.84
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I46.84
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E65.04
pituitary gland, embryo E13.CNhs11009.370-44C77.89
pituitary gland, embryo E14.CNhs11037.398-44A56.22
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H36.03
skin, neonate N06.CNhs11097.693-20I55.37
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C922.25
spleen, adult.CNhs10465.25-2G214.87
spleen, embryo E16.CNhs11035.461-43C17.84
spleen, embryo E18.CNhs11011.1271-21F28.52
spleen, neonate N10.CNhs11116.752-24D16.59
spleen, neonate N20.CNhs11112.824-19H111.07
spleen, neonate N25.CNhs11099.1354-25G310.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C656.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C951.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D360.95
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B85.53
stomach, neonate N07.CNhs11210.718-18A95.70
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I15.05
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D94.40
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I49.12
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C17.88
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F86.73
thymus, neonate N03.CNhs11137.2104-43C75.17
thymus, neonate N06.CNhs11197.681-26C46.87
thymus, neonate N07.CNhs11211.713-19D35.26
thymus, neonate N10.CNhs11194.748-24E43.53
thymus, neonate N20.CNhs11186.820-7A26.53
thymus, neonate N25.CNhs11125.1362-25G74.81
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B45.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I86.43
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F26.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I510.74
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D19.26
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
bone marrow3.74e-0916
bone element2.36e-0822
skeletal element2.36e-0822
skeletal system2.36e-0822







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:27693887..27693908,%2B&oldid=2941298"