FFCP PHASE1:Mm9::chr1:183074264..183074314,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67459|HGNC=|MCL_coexpression_id=364|UniProt=Q9DBY8,Q9CRW9|association_with_transcript=0bp_to_ENSMUST00000027797,NM_026171,uc007dxb.1,uc007dxd.1_5end|description=CAGE_peak_1_at_Nvl_5end|id=chr1:183074264..183074314,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!6.37e-09!147;UBERON:0004177!9.29e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.23e-10,43;UBERON:0001048,1.16e-08,134;UBERON:0004177,9.25e-08,29;UBERON:0005057,9.25e-08,29;UBERON:0007811,1.60e-07,36;UBERON:0000077,3.57e-07,35|phase1_expression=24.8230713012431,9.77131141390211,5.91499011206397,19.9626379462508,13.5241847085514,14.1018588405987,16.3528848416868,35.5089139464335,27.03143465312,34.407485369333,45.5439795479843,47.8632953972018,39.7185693440397,39.0769198812918,24.650122374359,31.1811911780332,32.1798463938947,31.3884854531446,37.9806981087896,27.585327366872,22.8766450506378,32.4681410426895,26.1199789138935,20.1590452719692,13.9939661450974,9.18771142584032,7.32295393470427,10.1271479362368,11.4014051673824,13.1055667475164,11.5299865540758,14.6057054895715,8.61090702618398,15.8481681015439,26.8632006368685,18.1195763440757,21.2336130512864,17.996860121687,14.0640362014284,18.8468547830567,14.1175557127443,14.3439551841274,23.3044969454954,31.8518949478211,26.9662637043909,37.443537440983,2.34717403304412,5.45062890951116,6.15121311656521,7.77719596297134,6.99932108126813,1.43752564364972,33.2209559994318,16.6833292662609,20.5017217476903,12.3484529297255,15.7593391966316,10.8291139378263,21.0409119293982,16.398720357433,19.0149421051854,4.74382344896785,4.4464739805557,3.5995988691256,1.97773272513395,0.7104801149461,2.69640099466564,2.30530983192933,25.0928861786516,21.0609263797437,23.9770455940576,7.9982275633065,6.84692476950002,24.9881230398506,24.6322860516867,12.8690630125403,9.91042928994498,13.9179198512855,13.2101618600369,19.5191705840687,21.5910838901687,21.8783615633839,11.1673199600552,9.56696437053856,10.8486755921535,15.6153150301044,15.5185132071022,17.335148461753,19.9917150399606,20.2531781086185,25.218210517046,18.0689014166091,10.879541339324,9.71465744948071,16.8941868536394,14.7848872742121,16.0106638950197,30.3365974188943,19.2241643406123,15.546941278455,19.5772353489586,14.115912515575,5.09610479413291,0,17.5357743219083,19.2553497761075,14.6602089054287,18.6119723942068,70.1721664683835,21.8209944425292,25.8493136881542,17.0500667854799,20.0635482612771,24.4170677695249,29.2795880767905,19.4783216560997,28.6746162571874,24.8710893902248,21.230653246797,23.4561932423743,27.6051898075492,36.3656439851417,14.9113408974498,42.4532155666743,46.9160623262139,21.9693067479389,27.7971088853735,18.5969846607956,25.0328347333937,28.4602214869163,26.5350349634803,36.1884534085049,36.3292829201858,37.3344567702283,23.2722609906707,27.2565321953833,26.8855920564835,23.0152895628672,14.6579199891531,31.987162094744,40.5975782043636,24.1397209655147,34.9320531822378,41.7452345404931,37.6241840306843,48.2988725473884,31.4837794520689,30.0095910057258,38.1555347491131,46.8983078816192,40.4687585577082,30.0298153425778,41.4290401346141,38.3077383174383,41.7737736908125,34.6319624264178,23.1730351813367,22.9039637332097,20.1756084570871,25.0622184767957,28.6121793176937,25.5688127274641,27.2256445922992,22.6278866509514,24.065669610431,23.0208605302904,22.8032391189676,21.1345269684577,21.3927804887525,24.4609521477852,21.4021657201059,17.6901984784652,21.2963611832319,17.9836601138898,34.697841513081,37.1485650689217,19.8251269790279,18.2470890997846,38.6051733468773,38.0868141851119,30.2838534106919,24.6053900040478,20.0140239460383,17.8812088545806,12.8122846617018,16.1404975629531,19.1014758688205,18.7019083718682,20.2762650603885,18.8752075817387,26.3688420847127,23.6978115172697,31.6745394591646,34.2745537829186,36.0664754153857,35.0280283893941,27.5412531778029,27.2828339373339,26.1166898323183,26.1269961923896,22.7648155369993,17.1522057851303,21.937494404449,40.0428253718626,36.5599730910558,40.025456004504,32.4576194221605,26.047133253261,22.1524491049835,25.3172600956713,27.400853324981,24.9850886001154,28.7536413054709,21.9563159124417,22.4667124642484,27.025939940341,21.7070870361514,22.6748455040783,25.6806934331581,28.0447289420317,39.1115943460862,33.4397818977121,32.6219445121018,35.6788328351068,24.0424077294874,23.6111713907937,35.7831777121054,30.3406624818822,28.2234940523752,24.9072238367922,24.6939524068231,22.5652531387158,21.1107797514981,19.5806046174735,30.4893849271802,24.8343071674259,19.9082731584862,29.7717683944196,25.9017213695147,17.4204939771017,21.1390507008892,30.0637833108412,28.0050417052639,24.3748173911603,23.3938607786514,18.6830510320629,27.1223170122179,21.3346776275258,27.6701444562566,33.0960955914461,27.8202567008207,21.3678724400706,25.8990265372186,27.8799507823585,17.2568679841952,29.3764569747528,23.5812374432506,28.479367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| ||
|EntrezGene=67459 | |||
|HGNC= | |||
|MCL_coexpression_id=364 | |||
|UniProt=Q9DBY8,Q9CRW9 | |||
|association_with_transcript=0bp_to_ENSMUST00000027797,NM_026171,uc007dxb.1,uc007dxd.1_5end | |||
|description=CAGE_peak_1_at_Nvl_5end | |||
|id=chr1:183074264..183074314,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!6.37e-09!147;UBERON:0004177!9.29e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.23e-10,43;UBERON:0001048,1.16e-08,134;UBERON:0004177,9.25e-08,29;UBERON:0005057,9.25e-08,29;UBERON:0007811,1.60e-07,36;UBERON:0000077,3.57e-07,35 | |||
|phase1_expression=24.8230713012431,9.77131141390211,5.91499011206397,19.9626379462508,13.5241847085514,14.1018588405987,16.3528848416868,35.5089139464335,27.03143465312,34.407485369333,45.5439795479843,47.8632953972018,39.7185693440397,39.0769198812918,24.650122374359,31.1811911780332,32.1798463938947,31.3884854531446,37.9806981087896,27.585327366872,22.8766450506378,32.4681410426895,26.1199789138935,20.1590452719692,13.9939661450974,9.18771142584032,7.32295393470427,10.1271479362368,11.4014051673824,13.1055667475164,11.5299865540758,14.6057054895715,8.61090702618398,15.8481681015439,26.8632006368685,18.1195763440757,21.2336130512864,17.996860121687,14.0640362014284,18.8468547830567,14.1175557127443,14.3439551841274,23.3044969454954,31.8518949478211,26.9662637043909,37.443537440983,2.34717403304412,5.45062890951116,6.15121311656521,7.77719596297134,6.99932108126813,1.43752564364972,33.2209559994318,16.6833292662609,20.5017217476903,12.3484529297255,15.7593391966316,10.8291139378263,21.0409119293982,16.398720357433,19.0149421051854,4.74382344896785,4.4464739805557,3.5995988691256,1.97773272513395,0.7104801149461,2.69640099466564,2.30530983192933,25.0928861786516,21.0609263797437,23.9770455940576,7.9982275633065,6.84692476950002,24.9881230398506,24.6322860516867,12.8690630125403,9.91042928994498,13.9179198512855,13.2101618600369,19.5191705840687,21.5910838901687,21.8783615633839,11.1673199600552,9.56696437053856,10.8486755921535,15.6153150301044,15.5185132071022,17.335148461753,19.9917150399606,20.2531781086185,25.218210517046,18.0689014166091,10.879541339324,9.71465744948071,16.8941868536394,14.7848872742121,16.0106638950197,30.3365974188943,19.2241643406123,15.546941278455,19.5772353489586,14.115912515575,5.09610479413291,0,17.5357743219083,19.2553497761075,14.6602089054287,18.6119723942068,70.1721664683835,21.8209944425292,25.8493136881542,17.0500667854799,20.0635482612771,24.4170677695249,29.2795880767905,19.4783216560997,28.6746162571874,24.8710893902248,21.230653246797,23.4561932423743,27.6051898075492,36.3656439851417,14.9113408974498,42.4532155666743,46.9160623262139,21.9693067479389,27.7971088853735,18.5969846607956,25.0328347333937,28.4602214869163,26.5350349634803,36.1884534085049,36.3292829201858,37.3344567702283,23.2722609906707,27.2565321953833,26.8855920564835,23.0152895628672,14.6579199891531,31.987162094744,40.5975782043636,24.1397209655147,34.9320531822378,41.7452345404931,37.6241840306843,48.2988725473884,31.4837794520689,30.0095910057258,38.1555347491131,46.8983078816192,40.4687585577082,30.0298153425778,41.4290401346141,38.3077383174383,41.7737736908125,34.6319624264178,23.1730351813367,22.9039637332097,20.1756084570871,25.0622184767957,28.6121793176937,25.5688127274641,27.2256445922992,22.6278866509514,24.065669610431,23.0208605302904,22.8032391189676,21.1345269684577,21.3927804887525,24.4609521477852,21.4021657201059,17.6901984784652,21.2963611832319,17.9836601138898,34.697841513081,37.1485650689217,19.8251269790279,18.2470890997846,38.6051733468773,38.0868141851119,30.2838534106919,24.6053900040478,20.0140239460383,17.8812088545806,12.8122846617018,16.1404975629531,19.1014758688205,18.7019083718682,20.2762650603885,18.8752075817387,26.3688420847127,23.6978115172697,31.6745394591646,34.2745537829186,36.0664754153857,35.0280283893941,27.5412531778029,27.2828339373339,26.1166898323183,26.1269961923896,22.7648155369993,17.1522057851303,21.937494404449,40.0428253718626,36.5599730910558,40.025456004504,32.4576194221605,26.047133253261,22.1524491049835,25.3172600956713,27.400853324981,24.9850886001154,28.7536413054709,21.9563159124417,22.4667124642484,27.025939940341,21.7070870361514,22.6748455040783,25.6806934331581,28.0447289420317,39.1115943460862,33.4397818977121,32.6219445121018,35.6788328351068,24.0424077294874,23.6111713907937,35.7831777121054,30.3406624818822,28.2234940523752,24.9072238367922,24.6939524068231,22.5652531387158,21.1107797514981,19.5806046174735,30.4893849271802,24.8343071674259,19.9082731584862,29.7717683944196,25.9017213695147,17.4204939771017,21.1390507008892,30.0637833108412,28.0050417052639,24.3748173911603,23.3938607786514,18.6830510320629,27.1223170122179,21.3346776275258,27.6701444562566,33.0960955914461,27.8202567008207,21.3678724400706,25.8990265372186,27.8799507823585,17.2568679841952,29.3764569747528,23.5812374432506,28.4793670431406,19.489924930131,32.8955608300002,22.4832615056352,22.1755574981278,25.3113138653152,30.6555655197742,24.2462799722497,26.8152412445286,27.5756080660568,37.9928908406065,23.0258457133303,25.9347812388227,29.9704994855442,25.5067409170961,24.0241570079097,12.4830629136986,29.5686352160275,33.2576351256198,20.9501978152214,27.2062317353442,38.7514624070173,32.0864760617789,24.7100752086493,27.4115302574252,21.2781010739791,24.6615651673978,32.9780799939856,23.5281029478074,36.4833218918332,36.7318491159147,46.2026489697065,34.5455041541849,29.0663115289493,26.7307273938187,29.2983944465378,13.3653886522116,33.3734473228098,31.71783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| |||
|short_description=p1@Nvl | |||
}} | |||
Revision as of 19:57, 13 September 2013
| Short description: | p1@Nvl |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Nvl_5end |
| Coexpression cluster: | MCL_coexpression_mm9:364 |
| Association with transcript: | 0bp_to_ENSMUST00000027797, NM_026171, uc007dxb.1, uc007dxd.1_5end |
| EntrezGene: | Nvl |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anterior region of body | 1.23e-10 | 43 |
| primordium | 1.16e-08 | 134 |
| hemopoietic organ | 9.25e-08 | 29 |
| immune organ | 9.25e-08 | 29 |
| craniocervical region | 1.60e-07 | 36 |
| mixed endoderm/mesoderm-derived structure | 3.57e-07 | 35 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
