FFCP PHASE1:Mm9::chr15:95893643..95893649,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=131|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:95893643..95893649,+|id=chr15:95893643..95893649,+|ontology_enrichment_celltype=CL:0000239!1.29e-09!6;CL:0000677!1.29e-09!6;CL:0000212!1.29e-09!6;CL:0000584!1.29e-09!6;CL:0000075!2.58e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,8.72e-17,6;CL:0000677,8.72e-17,6;CL:0000584,8.72e-17,6;CL:0000075,1.70e-14,7;CL:0002563,1.96e-11,9;CL:0002251,1.96e-11,9;CL:0002076,4.11e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.42e-19!15;UBERON:0000160!2.04e-15!43;UBERON:0001962!4.21e-13!2;UBERON:0001961!4.21e-13!2;UBERON:0001744!4.21e-13!2;UBERON:0004923!8.78e-12!24;UBERON:0001242!1.37e-11!13;UBERON:0000060!1.37e-11!13;UBERON:0001262!1.37e-11!13;UBERON:0004786!1.37e-11!13;UBERON:0005409!7.18e-11!59;UBERON:0002465!4.94e-09!3;UBERON:0003199!2.11e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.19e-26,15;UBERON:0001962,1.40e-22,2;UBERON:0001961,1.40e-22,2;UBERON:0001744,1.40e-22,2;UBERON:0004923,2.14e-16,24;UBERON:0002465,2.04e-15,3;UBERON:0001242,7.69e-14,13;UBERON:0001262,7.69e-14,13;UBERON:0004786,7.69e-14,13;UBERON:0000160,7.50e-13,31;UBERON:0003199,3.34e-12,1;UBERON:0003350,1.96e-11,9;UBERON:0004808,1.96e-11,9;UBERON:0001277,1.96e-11,9;UBERON:0000485,1.78e-09,11;UBERON:0005409,1.71e-08,47;UBERON:0001155,7.59e-07,2;UBERON:0000059,7.59e-07,2|phase1_expression=0,0,0,1.20985684522732,3.00537437967808,0,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,2.75291137280604,0,0,0.215471232685889,20.5225293012884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,6.87571473325215,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:95893643..95893649,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:95893643..95893649,+ | |||
|id=chr15:95893643..95893649,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.29e-09!6;CL:0000677!1.29e-09!6;CL:0000212!1.29e-09!6;CL:0000584!1.29e-09!6;CL:0000075!2.58e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.72e-17,6;CL:0000677,8.72e-17,6;CL:0000584,8.72e-17,6;CL:0000075,1.70e-14,7;CL:0002563,1.96e-11,9;CL:0002251,1.96e-11,9;CL:0002076,4.11e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.42e-19!15;UBERON:0000160!2.04e-15!43;UBERON:0001962!4.21e-13!2;UBERON:0001961!4.21e-13!2;UBERON:0001744!4.21e-13!2;UBERON:0004923!8.78e-12!24;UBERON:0001242!1.37e-11!13;UBERON:0000060!1.37e-11!13;UBERON:0001262!1.37e-11!13;UBERON:0004786!1.37e-11!13;UBERON:0005409!7.18e-11!59;UBERON:0002465!4.94e-09!3;UBERON:0003199!2.11e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.19e-26,15;UBERON:0001962,1.40e-22,2;UBERON:0001961,1.40e-22,2;UBERON:0001744,1.40e-22,2;UBERON:0004923,2.14e-16,24;UBERON:0002465,2.04e-15,3;UBERON:0001242,7.69e-14,13;UBERON:0001262,7.69e-14,13;UBERON:0004786,7.69e-14,13;UBERON:0000160,7.50e-13,31;UBERON:0003199,3.34e-12,1;UBERON:0003350,1.96e-11,9;UBERON:0004808,1.96e-11,9;UBERON:0001277,1.96e-11,9;UBERON:0000485,1.78e-09,11;UBERON:0005409,1.71e-08,47;UBERON:0001155,7.59e-07,2;UBERON:0000059,7.59e-07,2 | |||
|phase1_expression=0,0,0,1.20985684522732,3.00537437967808,0,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,2.75291137280604,0,0,0.215471232685889,20.5225293012884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,6.87571473325215,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:95893643..95893649,+ | |||
}} |
Revision as of 11:41, 13 September 2013
Short description: | p@chr15:95893643..95893649, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:95893643..95893649, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.72e-17 | 6 |
gut absorptive cell | 8.72e-17 | 6 |
enterocyte | 8.72e-17 | 6 |
columnar/cuboidal epithelial cell | 1.70e-14 | 7 |
intestinal epithelial cell | 1.96e-11 | 9 |
epithelial cell of alimentary canal | 1.96e-11 | 9 |
endo-epithelial cell | 4.11e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.19e-26 | 15 |
gut-associated lymphoid tissue | 1.40e-22 | 2 |
mucosa-associated lymphoid tissue | 1.40e-22 | 2 |
lymphoid tissue | 1.40e-22 | 2 |
organ component layer | 2.14e-16 | 24 |
lymphoid system | 2.04e-15 | 3 |
intestinal mucosa | 7.69e-14 | 13 |
wall of intestine | 7.69e-14 | 13 |
gastrointestinal system mucosa | 7.69e-14 | 13 |
intestine | 7.50e-13 | 31 |
egg chamber | 3.34e-12 | 1 |
epithelium of mucosa | 1.96e-11 | 9 |
gastrointestinal system epithelium | 1.96e-11 | 9 |
intestinal epithelium | 1.96e-11 | 9 |
simple columnar epithelium | 1.78e-09 | 11 |
gastrointestinal system | 1.71e-08 | 47 |
colon | 7.59e-07 | 2 |
large intestine | 7.59e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.