FFCP PHASE1:Mm9::chr1:72905036..72905063,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1429|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:72905036..72905063,-|id=chr1:72905036..72905063,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,1.93e-09,8;CL:0000333,2.23e-07,10;CL:0000095,2.23e-07,10;CL:0000243,2.23e-07,10;CL:0000123,2.23e-07,10;CL:0000125,2.23e-07,10;CL:0000030,2.23e-07,10;CL:0000339,2.23e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!5.54e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.46e-09,8;UBERON:0003296,2.46e-09,8;UBERON:0010133,2.46e-09,8;UBERON:0001894,2.69e-07,10;UBERON:0006222,2.69e-07,10|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.31811709640683,4.86074747685709,1.25987779462826,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,2.39680088414724,3.45796474789399,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.274462930807229,0.52091337055676,0.837548997004143,0.56276261003168,0.15279824777681,1.17851434189467,0.996601765593721,0.745597783301202,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0.34255163915718,0,0,1.04091196059682,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0,0,0.884610551949874,0.647067399789637,0.441683036920787,0.969750506270444,0,0.585561594023094,0.209446706813455,0,0,0,0,0,0,0,0,0,0.41557608911912,0.324482526135515,1.52759045775474,0.622034853050465,0,0.420883711772948,1.82168620147785,0.919608417733892,0.540186389416048,1.80845781402858,0.680364991513279,1.0249097622788,0.374806898238915,0.517406741478031,0,0.189106080167819,0.351902248327898,0.657587197282725,1.11218899690239,0.348252166522167,0.411564272815887,3.98068533636986,0,0,0,0.828503090142008,2.81431271977315,1.08037236876609,1.18372367792605,0.393528463494808,0.771335564436891,0.232533944750408,0.804820204198858,0.233530684734339,0,0.164167464079095,0.243206428637567,0.438599962275997,0.658650345873152,0.402619256281115,0,0.205809224758569,0,0,0.426576501070468,1.39342003116263,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0.569003702859245,0.456994050438915,1.1270773567308,1.22190796707189,1.16371492300575,0.561086559122548,0.442655759869801,0.885660887877613,0.941992367048249,0.987177311374404,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,1.01847051465113,0.938760993154008,0.167506257441816,0,0.390267295715598,0.157635144106191,0.221464689648775,0.637819074629948,0.491589944147214,0.518054945597687,0.867894351489069,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,1.76729649043061,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0,0,0,3.20518086601059,1.14020871547503,0.329940245945071,0,0.971122544619926,0.906970670894253,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.712994756769443,0,0,0,0.680879211507576,1.44048875225048,1.68166288917581,1.71469628025274,0.177340233642274,3.38900753443934,1.97458824722545,1.8267896946876,0.23467170806371,0.21183207086382,0.882113592219848,0.49465875882444,0,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0,1.857481811669,0.370389054739423,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0.406638934253697,1.29606408986162,0.836353184057875,0.655087691238533,0.944050424693745,0.330613822901344,0.26175594198403,0,0,0,0.897099276263873,1.15820943319968,0.583353565032143,1.93739735216597,1.01373675294467,0.469428954583016,0.13020438484395,0,0,0.288030006257865,0.316011120628178,1.21635129174099,0.616265742988964,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0.31136204275253,0.798049746802062,0.853668028770671,0.243106717068294,0.838452650511929,0,1.33348036680969,0.824140228955577,0.64183841918363,0.505394423527595,0.25347929989024,0.754505365544305,0.37456602987953,0.512201219238954,0.287177344778066,0.476293691283074,0.463537303779422,0,0,1.03039244094078,0.342869252385415,1.24233064311536,2.38436189947321,1.16277133305863,0.846984423737976,0.761531471025089,0.182927972872773,0.526139422875686,1.22223702461276,0.561142271657738,0.830445126869219,0.394017929502254,0.818462086339379,0.464810523557898,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0.220591419119515,0.927471342481686|short_description=p@chr1:72905036..72905063,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1429 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:72905036..72905063,- | |||
|id=chr1:72905036..72905063,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.93e-09,8;CL:0000333,2.23e-07,10;CL:0000095,2.23e-07,10;CL:0000243,2.23e-07,10;CL:0000123,2.23e-07,10;CL:0000125,2.23e-07,10;CL:0000030,2.23e-07,10;CL:0000339,2.23e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.54e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.46e-09,8;UBERON:0003296,2.46e-09,8;UBERON:0010133,2.46e-09,8;UBERON:0001894,2.69e-07,10;UBERON:0006222,2.69e-07,10 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.31811709640683,4.86074747685709,1.25987779462826,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,2.39680088414724,3.45796474789399,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.274462930807229,0.52091337055676,0.837548997004143,0.56276261003168,0.15279824777681,1.17851434189467,0.996601765593721,0.745597783301202,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0.34255163915718,0,0,1.04091196059682,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0,0,0.884610551949874,0.647067399789637,0.441683036920787,0.969750506270444,0,0.585561594023094,0.209446706813455,0,0,0,0,0,0,0,0,0,0.41557608911912,0.324482526135515,1.52759045775474,0.622034853050465,0,0.420883711772948,1.82168620147785,0.919608417733892,0.540186389416048,1.80845781402858,0.680364991513279,1.0249097622788,0.374806898238915,0.517406741478031,0,0.189106080167819,0.351902248327898,0.657587197282725,1.11218899690239,0.348252166522167,0.411564272815887,3.98068533636986,0,0,0,0.828503090142008,2.81431271977315,1.08037236876609,1.18372367792605,0.393528463494808,0.771335564436891,0.232533944750408,0.804820204198858,0.233530684734339,0,0.164167464079095,0.243206428637567,0.438599962275997,0.658650345873152,0.402619256281115,0,0.205809224758569,0,0,0.426576501070468,1.39342003116263,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0.569003702859245,0.456994050438915,1.1270773567308,1.22190796707189,1.16371492300575,0.561086559122548,0.442655759869801,0.885660887877613,0.941992367048249,0.987177311374404,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,1.01847051465113,0.938760993154008,0.167506257441816,0,0.390267295715598,0.157635144106191,0.221464689648775,0.637819074629948,0.491589944147214,0.518054945597687,0.867894351489069,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,1.76729649043061,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0,0,0,3.20518086601059,1.14020871547503,0.329940245945071,0,0.971122544619926,0.906970670894253,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.712994756769443,0,0,0,0.680879211507576,1.44048875225048,1.68166288917581,1.71469628025274,0.177340233642274,3.38900753443934,1.97458824722545,1.8267896946876,0.23467170806371,0.21183207086382,0.882113592219848,0.49465875882444,0,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0,1.857481811669,0.370389054739423,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0.406638934253697,1.29606408986162,0.836353184057875,0.655087691238533,0.944050424693745,0.330613822901344,0.26175594198403,0,0,0,0.897099276263873,1.15820943319968,0.583353565032143,1.93739735216597,1.01373675294467,0.469428954583016,0.13020438484395,0,0,0.288030006257865,0.316011120628178,1.21635129174099,0.616265742988964,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0.31136204275253,0.798049746802062,0.853668028770671,0.243106717068294,0.838452650511929,0,1.33348036680969,0.824140228955577,0.64183841918363,0.505394423527595,0.25347929989024,0.754505365544305,0.37456602987953,0.512201219238954,0.287177344778066,0.476293691283074,0.463537303779422,0,0,1.03039244094078,0.342869252385415,1.24233064311536,2.38436189947321,1.16277133305863,0.846984423737976,0.761531471025089,0.182927972872773,0.526139422875686,1.22223702461276,0.561142271657738,0.830445126869219,0.394017929502254,0.818462086339379,0.464810523557898,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0.220591419119515,0.927471342481686 | |||
|short_description=p@chr1:72905036..72905063,- | |||
}} |
Revision as of 20:52, 13 September 2013
Short description: | p@chr1:72905036..72905063, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72905036..72905063, - |
Coexpression cluster: | MCL_coexpression_mm9:1429 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.93e-09 | 8 |
migratory neural crest cell | 2.23e-07 | 10 |
neuron associated cell | 2.23e-07 | 10 |
glial cell (sensu Vertebrata) | 2.23e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.23e-07 | 10 |
glial cell | 2.23e-07 | 10 |
glioblast | 2.23e-07 | 10 |
glioblast (sensu Vertebrata) | 2.23e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.46e-09 | 8 |
gland of diencephalon | 2.46e-09 | 8 |
neuroendocrine gland | 2.46e-09 | 8 |
diencephalon | 2.69e-07 | 10 |
future diencephalon | 2.69e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.