FFCP PHASE1:Mm9::chr13:19715202..19715209,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20379|HGNC=|MCL_coexpression_id=2825|UniProt=Q9Z1N6,Q8CAH7|association_with_transcript=158bp_to_ENSMUST00000002883,NM_016687,uc007ppg.2,uc007pph.2_5end|description=CAGE_peak_4_at_Sfrp4_5end|id=chr13:19715202..19715209,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003100!1.03e-13!11;UBERON:0000474!1.58e-13!9;UBERON:0003134!1.16e-11!8;UBERON:0003975!2.93e-10!5;UBERON:0005795!6.98e-09!4;UBERON:0000995!6.98e-09!4;UBERON:0004175!2.49e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000474,3.75e-39,9;UBERON:0003100,3.07e-32,11;UBERON:0003134,2.39e-25,8;UBERON:0006834,3.06e-23,1;UBERON:0005795,8.43e-23,4;UBERON:0000995,8.43e-23,4;UBERON:0000993,1.39e-22,1;UBERON:0003975,1.74e-18,5;UBERON:0005156,3.27e-14,26;UBERON:0000990,3.27e-14,26;UBERON:0001987,4.02e-12,2;UBERON:0003124,4.02e-12,2;UBERON:0004340,4.02e-12,2;UBERON:0004175,9.02e-11,9;UBERON:0003133,4.35e-09,24;UBERON:0000992,1.34e-08,3;UBERON:0005631,1.59e-08,3;UBERON:0000478,1.59e-08,3;UBERON:0000158,1.59e-08,3;UBERON:0007023,1.20e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0.722996784599558,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,4.11626247103979,0.178065603667255,0,1.48473110675282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713475270408282,0.329098041204242,0.304464949114599,2.11204537257339,0.42366414172764,0,0,0.161464426695906,0.120625849856312,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.129014459926,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p4@Sfrp4}} | ||
|EntrezGene=20379 | |||
|HGNC= | |||
|MCL_coexpression_id=2825 | |||
|UniProt=Q9Z1N6,Q8CAH7 | |||
|association_with_transcript=158bp_to_ENSMUST00000002883,NM_016687,uc007ppg.2,uc007pph.2_5end | |||
|description=CAGE_peak_4_at_Sfrp4_5end | |||
|id=chr13:19715202..19715209,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!1.03e-13!11;UBERON:0000474!1.58e-13!9;UBERON:0003134!1.16e-11!8;UBERON:0003975!2.93e-10!5;UBERON:0005795!6.98e-09!4;UBERON:0000995!6.98e-09!4;UBERON:0004175!2.49e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000474,3.75e-39,9;UBERON:0003100,3.07e-32,11;UBERON:0003134,2.39e-25,8;UBERON:0006834,3.06e-23,1;UBERON:0005795,8.43e-23,4;UBERON:0000995,8.43e-23,4;UBERON:0000993,1.39e-22,1;UBERON:0003975,1.74e-18,5;UBERON:0005156,3.27e-14,26;UBERON:0000990,3.27e-14,26;UBERON:0001987,4.02e-12,2;UBERON:0003124,4.02e-12,2;UBERON:0004340,4.02e-12,2;UBERON:0004175,9.02e-11,9;UBERON:0003133,4.35e-09,24;UBERON:0000992,1.34e-08,3;UBERON:0005631,1.59e-08,3;UBERON:0000478,1.59e-08,3;UBERON:0000158,1.59e-08,3;UBERON:0007023,1.20e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0.722996784599558,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,4.11626247103979,0.178065603667255,0,1.48473110675282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713475270408282,0.329098041204242,0.304464949114599,2.11204537257339,0.42366414172764,0,0,0.161464426695906,0.120625849856312,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.129014459926,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Sfrp4 | |||
}} |
Revision as of 00:06, 13 September 2013
Short description: | p4@Sfrp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sfrp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2825 |
Association with transcript: | 158bp_to_ENSMUST00000002883, NM_016687, uc007ppg.2, uc007pph.2_5end |
EntrezGene: | Sfrp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female reproductive system | 3.75e-39 | 9 |
female organism | 3.07e-32 | 11 |
female reproductive organ | 2.39e-25 | 8 |
uterus or analog | 3.06e-23 | 1 |
embryonic uterus | 8.43e-23 | 4 |
uterus | 8.43e-23 | 4 |
oviduct | 1.39e-22 | 1 |
internal female genitalia | 1.74e-18 | 5 |
reproductive structure | 3.27e-14 | 26 |
reproductive system | 3.27e-14 | 26 |
placenta | 4.02e-12 | 2 |
chorion | 4.02e-12 | 2 |
allantois | 4.02e-12 | 2 |
internal genitalia | 9.02e-11 | 9 |
reproductive organ | 4.35e-09 | 24 |
female gonad | 1.34e-08 | 3 |
extraembryonic membrane | 1.59e-08 | 3 |
extraembryonic structure | 1.59e-08 | 3 |
membranous layer | 1.59e-08 | 3 |
adult organism | 1.20e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.