UBERON:0000992
From FANTOM5_SSTAR
Name: | female gonad | ||
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Namespace: | FANTOM | ||
Definition: | "Ovum-producing female reproductive organ." [Wikipedia:Ovary] | ||
Xrefs: |
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Synonyms: |
"female organism genitalia gonad" EXACT [OBOL:automatic] "female organism genitalia gonada" EXACT [OBOL:automatic] "female organism reproductive system gonad" EXACT [OBOL:automatic] "female organism reproductive system gonada" EXACT [OBOL:automatic] "female reproductive system gonad" EXACT [OBOL:automatic] "female reproductive system gonada" EXACT [OBOL:automatic] "genitalia of female organism gonad" EXACT [OBOL:automatic] "genitalia of female organism gonada" EXACT [OBOL:automatic] "gonad of female organism genitalia" EXACT [OBOL:automatic] "gonad of female organism reproductive system" EXACT [OBOL:automatic] "gonad of female reproductive system" EXACT [OBOL:automatic] "gonad of genitalia of female organism" EXACT [OBOL:automatic] "gonad of reproductive system of female organism" EXACT [OBOL:automatic] "gonada of female organism genitalia" EXACT [OBOL:automatic] "gonada of female organism reproductive system" EXACT [OBOL:automatic] "gonada of female reproductive system" EXACT [OBOL:automatic] "gonada of genitalia of female organism" EXACT [OBOL:automatic] "gonada of reproductive system of female organism" EXACT [OBOL:automatic] "ovaries" RELATED PLURAL [] "ovarium" RELATED LATIN [Wikipedia:Ovary] "ovary" EXACT [] "ovum-producing ovary" EXACT SENSU [GO:0061039] "reproductive system of female organism gonad" EXACT [OBOL:automatic] "reproductive system of female organism gonada" EXACT [OBOL:automatic] | ||
Comments: | Ovaries of some kind are found in the female reproductive system of many animals that employ sexual reproduction, including invertebrates. However, they develop in a very different way in most invertebrates than they do in vertebrates, and are not truly homologous. Many of the features found in human ovaries are common to all vertebrates, including the presence of follicular cells, tunica albuginea, and so on. However, many species produce a far greater number of eggs during their lifetime than do humans, so that, in fish and amphibians, there may be hundreds, or even millions of fertile eggs present in the ovary at any given time. In these species, fresh eggs may be developing from the germinal epithelium throughout life. Corpora lutea are found only in mammals, and in some elasmobranch fish; in other species, the remnants of the follicle are quickly resorbed by the ovary. In birds, reptiles, and monotremes, the egg is relatively large, filling the follicle, and distorting the shape of the ovary at maturity. Amphibians and reptiles have no ovarian medulla; the central part of the ovary is a hollow, lymph-filled space. The ovary of teleosts is also often hollow, but in this case, the eggs are shed into the cavity, which opens into the oviduct. Although most normal female vertebrates have two ovaries, this is not the case in all species. In birds and platypuses, the right ovary never matures, so that only the left is functional. In some elasmobranchs, the reverse is true, with only the right ovary fully developing. In the primitive jawless fish, and some teleosts, there is only one ovary, formed by the fusion of the paired organs in the embryo[WP]. | ||
Alt_id: | UBERON:FBbt_00004865-FMA_7209-MA_0000384-MIAA_0000125-XAO_0000258-ZFA_0000403 | ||
Subset: |
organ_slim uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000991(gonad),UBERON:0003134(female reproductive organ) |
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disjoint_from: | UBERON:0009117(indifferent gonad) |
develops_from: | UBERON:0009117(indifferent gonad) |
part_of: | UBERON:0000474(female reproductive system) |
Children
is a: | UBERON:0002118 (right ovary),UBERON:0002119 (left ovary) |
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disjoint from: | UBERON:0000473 (testis) |
derives from: | FF:0010020 (human ovary - adult sample),FF:0011378 (mouse ovary- embryo E18 sample),FF:0011439 (mouse ovary- adult sample),FF:0011510 (mouse ovary, neonate N00 sample),FF:0100977 (ovary cell line sample) |
part of: | UBERON:0004911 (epithelium of female gonad) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10020-101D2 (ovary, adult, pool1)
- 10693-109F9 (serous cystadenocarcinoma cell line:HTOA)
- 10757-110E1
- 10780-110G6
- 10784-110H1 (mucinous cystadenocarcinoma cell line:MCAS)
- 10793-110I1
- 10794-110I2
- 10807-111A6 (teratocarcinoma cell line:PA-1)
- 11756-123H1 (mesenchymal precursor cell - ovarian cancer left ovary, donor1)
- 11757-123H2 (mesenchymal precursor cell - ovarian cancer right ovary, donor1)
... further results Mouse (Mus musculus)
- 10020-101D2 (ovary, adult, pool1)
- 10693-109F9 (serous cystadenocarcinoma cell line:HTOA)
- 10757-110E1
- 10780-110G6
- 10784-110H1 (mucinous cystadenocarcinoma cell line:MCAS)
- 10793-110I1
- 10794-110I2
- 10807-111A6 (teratocarcinoma cell line:PA-1)
- 11756-123H1 (mesenchymal precursor cell - ovarian cancer left ovary, donor1)
- 11757-123H2 (mesenchymal precursor cell - ovarian cancer right ovary, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000992 (female gonad), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.58e-86 | FFCP PHASE2:Mm9::chrX:140752342..140752344,+#_872170e79398cc5ab87396f8f2261eeb | p6@Alg13 |
1.58e-86 | FFCP PHASE1:Mm9::chrX:140752342..140752344,+#_872170e79398cc5ab87396f8f2261eeb | p6@Alg13 |
1.33e-65 | FFCP PHASE1:Mm9::chr10:107980160..107980166,+#_8fee6f150cff6b87d2f67a45947384a3 | p@chr10:107980160..107980166, + |
1.33e-65 | FFCP PHASE2:Mm9::chr10:107980160..107980166,+#_8fee6f150cff6b87d2f67a45947384a3 | p@chr10:107980160..107980166, + |
3.28e-58 | FFCP PHASE1:Mm9::chr7:114310501..114310505,+#_bb8710daa830fb47ea64023c9192f965 | p2@Nlrp14 |
3.28e-58 | FFCP PHASE2:Mm9::chr7:24170907..24170914,+#_bb8710daa830fb47ea64023c9192f965 | p1@Nlrp5 |
3.28e-58 | FFCP PHASE1:Mm9::chr4:155424607..155424615,-#_bb8710daa830fb47ea64023c9192f965 | p@chr4:155424607..155424615, - |
3.28e-58 | FFCP PHASE2:Mm9::chr6:85967256..85967266,+#_bb8710daa830fb47ea64023c9192f965 | p@chr6:85967256..85967266, + |
3.28e-58 | FFCP PHASE1:Mm9::chr1:134927157..134927163,-#_bb8710daa830fb47ea64023c9192f965 | p2@Mdm4 |
3.28e-58 | FFCP PHASE2:Mm9::chr4:155424607..155424615,-#_bb8710daa830fb47ea64023c9192f965 | p@chr4:155424607..155424615, - |
3.28e-58 | FFCP PHASE2:Mm9::chr6:85967270..85967280,+#_bb8710daa830fb47ea64023c9192f965 | p@chr6:85967270..85967280, + |
3.28e-58 | FFCP PHASE1:Mm9::chr6:95283986..95283988,-#_bb8710daa830fb47ea64023c9192f965 | p1@AY512915 |
3.28e-58 | FFCP PHASE1:Mm9::chr7:24170907..24170914,+#_bb8710daa830fb47ea64023c9192f965 | p1@Nlrp5 |
3.28e-58 | FFCP PHASE2:Mm9::chr7:114310501..114310505,+#_bb8710daa830fb47ea64023c9192f965 | p2@Nlrp14 |
3.28e-58 | FFCP PHASE2:Mm9::chr6:95283986..95283988,-#_bb8710daa830fb47ea64023c9192f965 | p1@AY512915 |
3.28e-58 | FFCP PHASE1:Mm9::chr6:85967256..85967266,+#_bb8710daa830fb47ea64023c9192f965 | p@chr6:85967256..85967266, + |
3.28e-58 | FFCP PHASE2:Mm9::chr1:134927157..134927163,-#_bb8710daa830fb47ea64023c9192f965 | p2@Mdm4 |
3.28e-58 | FFCP PHASE1:Mm9::chr6:85967270..85967280,+#_bb8710daa830fb47ea64023c9192f965 | p@chr6:85967270..85967280, + |
3.05e-53 | FFCP PHASE1:Hg19::chr8:38008450..38008459,-#_c69a27fd6313fee99fe1efea4685602b | p4@STAR |
3.05e-53 | FFCP PHASE2:Hg19::chr8:38008450..38008459,-#_c69a27fd6313fee99fe1efea4685602b | p4@STAR |
1.1e-52 | FFCP PHASE1:Mm9::chr7:127288800..127288806,-#_fb66226adf13eeb2f6d8cb5b60413199 | p1@Zp2 |
1.1e-52 | FFCP PHASE2:Mm9::chr7:127288800..127288806,-#_fb66226adf13eeb2f6d8cb5b60413199 | p1@Zp2 |
3.91e-46 | FFCP PHASE1:Hg19::chr5:81654563..81654582,+#_7e9d8236f562afe9954f3f493f73b97b | p@chr5:81654563..81654582, + |
3.91e-46 | FFCP PHASE2:Hg19::chr5:81654563..81654582,+#_7e9d8236f562afe9954f3f493f73b97b | p@chr5:81654563..81654582, + |
6.25e-43 | FFCP PHASE1:Hg19::chr9:127269661..127269719,-#_a9605b3653bdb35a7620ce7db4753d7e | p1@NR5A1 |
6.25e-43 | FFCP PHASE2:Hg19::chr9:127269661..127269719,-#_a9605b3653bdb35a7620ce7db4753d7e | p1@NR5A1 |
4.21e-42 | FFCP PHASE1:Hg19::chr5:81654586..81654599,+#_585c3f6868254d45eb131c960cc1c09d | p@chr5:81654586..81654599, + |
4.21e-42 | FFCP PHASE2:Hg19::chr5:81654586..81654599,+#_585c3f6868254d45eb131c960cc1c09d | p@chr5:81654586..81654599, + |
1.7e-39 | FFCP PHASE2:Mm9::chr6:85967211..85967223,+#_f26072fbc93fe868def662a2b331a9eb | p1@Figla |
1.7e-39 | FFCP PHASE1:Mm9::chr6:85967211..85967223,+#_f26072fbc93fe868def662a2b331a9eb | p1@Figla |
1.7e-39 | FFCP PHASE1:Mm9::chr13:65307269..65307277,-#_f26072fbc93fe868def662a2b331a9eb | p1@Nlrp4f |
1.7e-39 | FFCP PHASE2:Mm9::chr13:65307269..65307277,-#_f26072fbc93fe868def662a2b331a9eb | p1@Nlrp4f |
8.46e-39 | FFCP PHASE1:Hg19::chr6:14671928..14671958,+#_d5308cc85fc3bcbf5b2d22413ca6e852 | p@chr6:14671928..14671958, + |
8.46e-39 | FFCP PHASE2:Hg19::chr6:14671928..14671958,+#_d5308cc85fc3bcbf5b2d22413ca6e852 | p@chr6:14671928..14671958, + |
1.39e-38 | FFCP PHASE1:Hg19::chr9:6257179..6257191,+#_b07d2457ea37b0b592bf0bd732da1ff6 | p@chr9:6257179..6257191, + |
1.39e-38 | FFCP PHASE2:Hg19::chr9:6257179..6257191,+#_b07d2457ea37b0b592bf0bd732da1ff6 | p@chr9:6257179..6257191, + |
8.4e-38 | FFCP PHASE2:Hg19::chr4:38143865..38143904,-#_0f78977b5cb8b0e70715a7b084781948 | p@chr4:38143865..38143904, - |
8.4e-38 | FFCP PHASE1:Hg19::chr4:38143865..38143904,-#_0f78977b5cb8b0e70715a7b084781948 | p@chr4:38143865..38143904, - |
1.13e-37 | FFCP PHASE1:Hg19::chr8:38008485..38008499,-#_2723abae2bd59dff9f3bc63da6a8f774 | p3@STAR |
1.13e-37 | FFCP PHASE2:Hg19::chr8:38008485..38008499,-#_2723abae2bd59dff9f3bc63da6a8f774 | p3@STAR |
1.35e-37 | FFCP PHASE1:Hg19::chr3:197640161..197640186,-#_91118e8507b6e1d741d3ffaa7f0510fd | p5@IQCG |
1.35e-37 | FFCP PHASE2:Hg19::chr3:197640161..197640186,-#_91118e8507b6e1d741d3ffaa7f0510fd | p5@IQCG |
1.12e-34 | FFCP PHASE1:Hg19::chr1:9262795..9262800,-#_3aeea2a06a9029cd7062c023d3a7a72d | p3@ENST00000437157 |
1.12e-34 | FFCP PHASE2:Hg19::chr1:9262795..9262800,-#_3aeea2a06a9029cd7062c023d3a7a72d | p3@ENST00000437157 |
3.07e-34 | FFCP PHASE1:Hg19::chr3:197639921..197639934,-#_00d526e27789b65479f8881fbac490e4 | p6@IQCG |
3.07e-34 | FFCP PHASE2:Hg19::chr3:197639921..197639934,-#_00d526e27789b65479f8881fbac490e4 | p6@IQCG |
3.61e-33 | FFCP PHASE1:Mm9::chr12:106460922..106460932,-#_6c61162360fe1fc93b82ce1391db9cc6 | p1@Tcl1 |
3.61e-33 | FFCP PHASE2:Mm9::chr12:106460922..106460932,-#_6c61162360fe1fc93b82ce1391db9cc6 | p1@Tcl1 |
2.11e-32 | FFCP PHASE2:Hg19::chr16:88278862..88278869,-#_813c3746bd172c11587de1468988c7c7 | p@chr16:88278862..88278869, - |
2.11e-32 | FFCP PHASE1:Hg19::chr16:88278862..88278869,-#_813c3746bd172c11587de1468988c7c7 | p@chr16:88278862..88278869, - |
6.67e-32 | FFCP PHASE1:Hg19::chr3:197640146..197640157,-#_578a4e5cd7e0e3a81312566b0867ec7b | p7@IQCG |
6.67e-32 | FFCP PHASE2:Hg19::chr3:197640146..197640157,-#_578a4e5cd7e0e3a81312566b0867ec7b | p7@IQCG |
9.85e-31 | FFCP PHASE1:Hg19::chr12:41374693..41374709,+#_99f1abb76399c9ff6610b026057779a8 | p@chr12:41374693..41374709, + |
9.85e-31 | FFCP PHASE2:Hg19::chr12:41374693..41374709,+#_99f1abb76399c9ff6610b026057779a8 | p@chr12:41374693..41374709, + |
4.03e-30 | FFCP PHASE1:Mm9::chr10:92400752..92400763,-#_c39855ea57efee5b4d05b3abce9397a6 | p@chr10:92400752..92400763, - |
4.03e-30 | FFCP PHASE2:Mm9::chr4:140298554..140298559,-#_c39855ea57efee5b4d05b3abce9397a6 | p1@Padi6 |
4.03e-30 | FFCP PHASE2:Mm9::chr10:92400752..92400763,-#_c39855ea57efee5b4d05b3abce9397a6 | p@chr10:92400752..92400763, - |
4.03e-30 | FFCP PHASE1:Mm9::chr4:140298554..140298559,-#_c39855ea57efee5b4d05b3abce9397a6 | p1@Padi6 |
5.61e-30 | FFCP PHASE1:Mm9::chr4:143752549..143752554,-#_633733813a924eb281c219fba0055655 | p1@Oog3 |
5.61e-30 | FFCP PHASE2:Mm9::chr4:136702613..136702617,+#_633733813a924eb281c219fba0055655 | p@chr4:136702613..136702617, + |
5.61e-30 | FFCP PHASE1:Mm9::chr1:114682122..114682124,+#_633733813a924eb281c219fba0055655 | p@chr1:114682122..114682124, + |
5.61e-30 | FFCP PHASE1:Mm9::chr14:71052888..71052893,-#_633733813a924eb281c219fba0055655 | p2@Npm2 |
5.61e-30 | FFCP PHASE2:Mm9::chr10:68711399..68711404,+#_633733813a924eb281c219fba0055655 | p@chr10:68711399..68711404, + |
5.61e-30 | FFCP PHASE2:Mm9::chr7:11273140..11273141,+#_633733813a924eb281c219fba0055655 | p1@Nlrp4b |
5.61e-30 | FFCP PHASE2:Mm9::chr9:51855257..51855268,+#_633733813a924eb281c219fba0055655 | p12@Rdx |
5.61e-30 | FFCP PHASE2:Mm9::chr16:36924738..36924754,+#_633733813a924eb281c219fba0055655 | p7@Golgb1 |
5.61e-30 | FFCP PHASE2:Mm9::chr9:101764724..101764731,-#_633733813a924eb281c219fba0055655 | p5@uc009rfm.1 |
5.61e-30 | FFCP PHASE2:Mm9::chr13:54885349..54885354,+#_633733813a924eb281c219fba0055655 | p1@Eif4e1b |
5.61e-30 | FFCP PHASE2:Mm9::chr17:86474670..86474675,-#_633733813a924eb281c219fba0055655 | p@chr17:86474670..86474675, - |
5.61e-30 | FFCP PHASE1:Mm9::chr1:79857869..79857878,-#_633733813a924eb281c219fba0055655 | p@chr1:79857869..79857878, - |
5.61e-30 | FFCP PHASE1:Mm9::chr19:10995119..10995125,-#_633733813a924eb281c219fba0055655 | p1@Zp1 |
5.61e-30 | FFCP PHASE2:Mm9::chr9:75195696..75195700,+#_633733813a924eb281c219fba0055655 | p1@Bcl2l10 |
5.61e-30 | FFCP PHASE1:Mm9::chr9:101764724..101764731,-#_633733813a924eb281c219fba0055655 | p5@uc009rfm.1 |
5.61e-30 | FFCP PHASE1:Mm9::chr5:123462885..123462889,-#_633733813a924eb281c219fba0055655 | p35@Kdm2b |
5.61e-30 | FFCP PHASE1:Mm9::chr6:87054738..87054746,+#_633733813a924eb281c219fba0055655 | p1@D6Ertd527e |
5.61e-30 | FFCP PHASE2:Mm9::chr15:76407178..76407182,-#_633733813a924eb281c219fba0055655 | p@chr15:76407178..76407182, - |
5.61e-30 | FFCP PHASE1:Mm9::chr17:36084106..36084115,+#_633733813a924eb281c219fba0055655 | p1@Gm8801 |
5.61e-30 | FFCP PHASE1:Mm9::chr9:75195562..75195570,+#_633733813a924eb281c219fba0055655 | p2@Bcl2l10 |
5.61e-30 | FFCP PHASE2:Mm9::chr13:87803080..87803083,+#_633733813a924eb281c219fba0055655 | p@chr13:87803080..87803083, + |
5.61e-30 | FFCP PHASE1:Mm9::chr13:87803080..87803083,+#_633733813a924eb281c219fba0055655 | p@chr13:87803080..87803083, + |
5.61e-30 | FFCP PHASE1:Mm9::chr16:36924738..36924754,+#_633733813a924eb281c219fba0055655 | p7@Golgb1 |
5.61e-30 | FFCP PHASE1:Mm9::chr9:51855257..51855268,+#_633733813a924eb281c219fba0055655 | p12@Rdx |
5.61e-30 | FFCP PHASE2:Mm9::chr2:93709258..93709260,-#_633733813a924eb281c219fba0055655 | p1@Accsl |
5.61e-30 | FFCP PHASE1:Mm9::chr15:72882667..72882675,-#_633733813a924eb281c219fba0055655 | p@chr15:72882667..72882675, - |
5.61e-30 | FFCP PHASE1:Mm9::chr9:20764229..20764236,-#_633733813a924eb281c219fba0055655 | p7@Dnmt1 |
5.61e-30 | FFCP PHASE2:Mm9::chr4:143752549..143752554,-#_633733813a924eb281c219fba0055655 | p1@Oog3 |
5.61e-30 | FFCP PHASE2:Mm9::chr1:114682122..114682124,+#_633733813a924eb281c219fba0055655 | p@chr1:114682122..114682124, + |
5.61e-30 | FFCP PHASE1:Mm9::chr17:71036837..71036839,-#_633733813a924eb281c219fba0055655 | p@chr17:71036837..71036839, - |
5.61e-30 | FFCP PHASE1:Mm9::chr6:83409099..83409106,-#_633733813a924eb281c219fba0055655 | p@chr6:83409099..83409106, - |
5.61e-30 | FFCP PHASE2:Mm9::chr1:158200894..158200897,-#_633733813a924eb281c219fba0055655 | p@chr1:158200894..158200897, - |
5.61e-30 | FFCP PHASE2:Mm9::chr19:11771539..11771547,+#_633733813a924eb281c219fba0055655 | p1@Gm97 |
5.61e-30 | FFCP PHASE2:Mm9::chr9:20764229..20764236,-#_633733813a924eb281c219fba0055655 | p7@Dnmt1 |
5.61e-30 | FFCP PHASE1:Mm9::chr6:136364088..136364093,-#_633733813a924eb281c219fba0055655 | p1@E330021D16Rik |
5.61e-30 | FFCP PHASE2:Mm9::chr7:91461243..91461249,+#_633733813a924eb281c219fba0055655 | p@chr7:91461243..91461249, + |
5.61e-30 | FFCP PHASE2:Mm9::chr4:149057252..149057255,-#_633733813a924eb281c219fba0055655 | p@chr4:149057252..149057255, - |
5.61e-30 | FFCP PHASE1:Mm9::chr1:93074296..93074300,+#_633733813a924eb281c219fba0055655 | p@chr1:93074296..93074300, + |
5.61e-30 | FFCP PHASE2:Mm9::chr8:8457435..8457437,-#_633733813a924eb281c219fba0055655 | p@chr8:8457435..8457437, - |
5.61e-30 | FFCP PHASE1:Mm9::chr11:69144939..69144953,+#_633733813a924eb281c219fba0055655 | p@chr11:69144939..69144953, + |
5.61e-30 | FFCP PHASE1:Mm9::chr19:11771539..11771547,+#_633733813a924eb281c219fba0055655 | p1@Gm97 |
5.61e-30 | FFCP PHASE1:Mm9::chr1:158200952..158200959,-#_633733813a924eb281c219fba0055655 | p@chr1:158200952..158200959, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Either of paired female reproductive organs involved in production of ova and female sex hormones.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Female reproductive organ.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.