FFCP PHASE1:Mm9::chr5:135426988..135427015,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=34|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:135426988..135427015,-|id=chr5:135426988..135427015,-|ontology_enrichment_celltype=CL:0000066!1.35e-17!25;CL:0002076!6.84e-16!15;CL:0002563!8.88e-16!9;CL:0002251!8.88e-16!9;CL:0000223!2.87e-15!20;CL:0000239!7.74e-12!6;CL:0000677!7.74e-12!6;CL:0000212!7.74e-12!6;CL:0000584!7.74e-12!6;CL:0000075!5.50e-10!7|ontology_enrichment_celltype_v019_2=CL:0000239,4.12e-38,6;CL:0000677,4.12e-38,6;CL:0000584,4.12e-38,6;CL:0002076,4.24e-33,15;CL:0000075,1.19e-32,7;CL:0002563,2.30e-25,9;CL:0002251,2.30e-25,9;CL:0000223,1.24e-24,20;CL:0000066,5.21e-24,25;CL:0000068,6.27e-19,3;CL:0002202,6.27e-19,3;CL:0000069,6.27e-19,3;CL:0002632,6.27e-19,3;CL:0002368,6.27e-19,3;CL:0000307,6.27e-19,3;CL:0000377,6.27e-19,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!8.88e-16!9;UBERON:0004808!8.88e-16!9;UBERON:0001277!8.88e-16!9;UBERON:0000344!1.88e-15!15;UBERON:0001242!9.58e-13!13;UBERON:0000060!9.58e-13!13;UBERON:0001262!9.58e-13!13;UBERON:0004786!9.58e-13!13;UBERON:0000485!1.66e-12!11;UBERON:0004923!1.79e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.30e-25,9;UBERON:0004808,2.30e-25,9;UBERON:0001277,2.30e-25,9;UBERON:0000485,1.02e-20,11;UBERON:0003126,6.27e-19,3;UBERON:0001005,6.27e-19,3;UBERON:0007196,6.27e-19,3;UBERON:0001558,6.27e-19,3;UBERON:0001242,1.70e-17,13;UBERON:0001262,1.70e-17,13;UBERON:0004786,1.70e-17,13;UBERON:0000344,3.95e-15,15;UBERON:0004923,2.44e-09,24;UBERON:0000160,3.79e-07,31|phase1_expression=0,2.79180326111489,3.63999391511629,3.0246421130683,2.00358291978539,2.51818907867835,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.22940928106717,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0,0,1.23012957516914,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.5154372870785,1.77351905832569,1.51657333504435,0,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,7.47905091972963,4.61839792668071,2.76399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0.221985953374065,0,0.167884616364078,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr5:135426988..135427015,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=34 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:135426988..135427015,- | |||
|id=chr5:135426988..135427015,- | |||
|ontology_enrichment_celltype=CL:0000066!1.35e-17!25;CL:0002076!6.84e-16!15;CL:0002563!8.88e-16!9;CL:0002251!8.88e-16!9;CL:0000223!2.87e-15!20;CL:0000239!7.74e-12!6;CL:0000677!7.74e-12!6;CL:0000212!7.74e-12!6;CL:0000584!7.74e-12!6;CL:0000075!5.50e-10!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.12e-38,6;CL:0000677,4.12e-38,6;CL:0000584,4.12e-38,6;CL:0002076,4.24e-33,15;CL:0000075,1.19e-32,7;CL:0002563,2.30e-25,9;CL:0002251,2.30e-25,9;CL:0000223,1.24e-24,20;CL:0000066,5.21e-24,25;CL:0000068,6.27e-19,3;CL:0002202,6.27e-19,3;CL:0000069,6.27e-19,3;CL:0002632,6.27e-19,3;CL:0002368,6.27e-19,3;CL:0000307,6.27e-19,3;CL:0000377,6.27e-19,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!8.88e-16!9;UBERON:0004808!8.88e-16!9;UBERON:0001277!8.88e-16!9;UBERON:0000344!1.88e-15!15;UBERON:0001242!9.58e-13!13;UBERON:0000060!9.58e-13!13;UBERON:0001262!9.58e-13!13;UBERON:0004786!9.58e-13!13;UBERON:0000485!1.66e-12!11;UBERON:0004923!1.79e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.30e-25,9;UBERON:0004808,2.30e-25,9;UBERON:0001277,2.30e-25,9;UBERON:0000485,1.02e-20,11;UBERON:0003126,6.27e-19,3;UBERON:0001005,6.27e-19,3;UBERON:0007196,6.27e-19,3;UBERON:0001558,6.27e-19,3;UBERON:0001242,1.70e-17,13;UBERON:0001262,1.70e-17,13;UBERON:0004786,1.70e-17,13;UBERON:0000344,3.95e-15,15;UBERON:0004923,2.44e-09,24;UBERON:0000160,3.79e-07,31 | |||
|phase1_expression=0,2.79180326111489,3.63999391511629,3.0246421130683,2.00358291978539,2.51818907867835,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.22940928106717,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0,0,1.23012957516914,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.5154372870785,1.77351905832569,1.51657333504435,0,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,7.47905091972963,4.61839792668071,2.76399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0.221985953374065,0,0.167884616364078,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:135426988..135427015,- | |||
}} |
Revision as of 06:37, 14 September 2013
Short description: | p@chr5:135426988..135427015, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135426988..135427015, - |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.12e-38 | 6 |
gut absorptive cell | 4.12e-38 | 6 |
enterocyte | 4.12e-38 | 6 |
endo-epithelial cell | 4.24e-33 | 15 |
columnar/cuboidal epithelial cell | 1.19e-32 | 7 |
intestinal epithelial cell | 2.30e-25 | 9 |
epithelial cell of alimentary canal | 2.30e-25 | 9 |
endodermal cell | 1.24e-24 | 20 |
epithelial cell | 5.21e-24 | 25 |
duct epithelial cell | 6.27e-19 | 3 |
epithelial cell of tracheobronchial tree | 6.27e-19 | 3 |
branched duct epithelial cell | 6.27e-19 | 3 |
epithelial cell of lower respiratory tract | 6.27e-19 | 3 |
respiratory epithelial cell | 6.27e-19 | 3 |
tracheal epithelial cell | 6.27e-19 | 3 |
tracheoblast | 6.27e-19 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.30e-25 | 9 |
gastrointestinal system epithelium | 2.30e-25 | 9 |
intestinal epithelium | 2.30e-25 | 9 |
simple columnar epithelium | 1.02e-20 | 11 |
trachea | 6.27e-19 | 3 |
respiratory airway | 6.27e-19 | 3 |
tracheobronchial tree | 6.27e-19 | 3 |
lower respiratory tract | 6.27e-19 | 3 |
intestinal mucosa | 1.70e-17 | 13 |
wall of intestine | 1.70e-17 | 13 |
gastrointestinal system mucosa | 1.70e-17 | 13 |
mucosa | 3.95e-15 | 15 |
organ component layer | 2.44e-09 | 24 |
intestine | 3.79e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.