FFCP PHASE1:Mm9::chr11:45793757..45793775,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=214105|HGNC=|MCL_coexpression_id=0|UniProt=Q8CGW4,Q5SUH8|association_with_transcript=-36bp_to_ENSMUST00000049038,NM_173384,uc011xtj.1_5end|description=CAGE_peak_2_at_Sox30_5end|id=chr11:45793757..45793775,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!2.21e-14!18;UBERON:0005564!2.21e-14!18;UBERON:0004176!2.37e-13!17;UBERON:0009196!2.37e-13!17;UBERON:0009117!2.37e-13!17;UBERON:0003135!2.47e-12!15;UBERON:0000473!1.11e-11!14;UBERON:0003101!3.07e-11!16;UBERON:0000079!3.07e-11!16;UBERON:0003133!1.56e-10!24;UBERON:0005156!3.04e-09!26;UBERON:0000990!3.04e-09!26|ontology_enrichment_uberon_v019_2=UBERON:0004176,2.38e-14,17;UBERON:0009196,2.38e-14,17;UBERON:0009117,2.38e-14,17;UBERON:0000991,1.38e-13,18;UBERON:0005564,1.38e-13,18;UBERON:0003133,2.47e-10,24;UBERON:0000473,3.07e-10,14;UBERON:0003135,1.32e-09,15;UBERON:0005156,1.40e-09,26;UBERON:0000990,1.40e-09,26;UBERON:0003101,4.76e-09,16;UBERON:0000079,4.76e-09,16;UBERON:0002323,7.14e-07,37;UBERON:0004458,7.14e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0.367472397644862,0.191690942036473,1.83843757322004,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0.407357455401265,0.248813941220186,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.384341160854549,0.281105173679186,0.258703370739016,0.431135985865684,0.567318240503458,0.351902248327898,0.219195732427575,0,0,0,0.995171334092466,0,0,0,0,0,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0.790575555893047,0,0.141940085208269,1.95872164033981,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,21.9840246086834,0.448549638131936,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.838874755405687,8.69702834973622,14.977560325409,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0.29551344712669,0,0,0,0,0,0,0,0,0.463735671240843|short_description=p2@Sox30}} | ||
|EntrezGene=214105 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q8CGW4,Q5SUH8 | |||
|association_with_transcript=-36bp_to_ENSMUST00000049038,NM_173384,uc011xtj.1_5end | |||
|description=CAGE_peak_2_at_Sox30_5end | |||
|id=chr11:45793757..45793775,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!2.21e-14!18;UBERON:0005564!2.21e-14!18;UBERON:0004176!2.37e-13!17;UBERON:0009196!2.37e-13!17;UBERON:0009117!2.37e-13!17;UBERON:0003135!2.47e-12!15;UBERON:0000473!1.11e-11!14;UBERON:0003101!3.07e-11!16;UBERON:0000079!3.07e-11!16;UBERON:0003133!1.56e-10!24;UBERON:0005156!3.04e-09!26;UBERON:0000990!3.04e-09!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,2.38e-14,17;UBERON:0009196,2.38e-14,17;UBERON:0009117,2.38e-14,17;UBERON:0000991,1.38e-13,18;UBERON:0005564,1.38e-13,18;UBERON:0003133,2.47e-10,24;UBERON:0000473,3.07e-10,14;UBERON:0003135,1.32e-09,15;UBERON:0005156,1.40e-09,26;UBERON:0000990,1.40e-09,26;UBERON:0003101,4.76e-09,16;UBERON:0000079,4.76e-09,16;UBERON:0002323,7.14e-07,37;UBERON:0004458,7.14e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0.367472397644862,0.191690942036473,1.83843757322004,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0.407357455401265,0.248813941220186,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.384341160854549,0.281105173679186,0.258703370739016,0.431135985865684,0.567318240503458,0.351902248327898,0.219195732427575,0,0,0,0.995171334092466,0,0,0,0,0,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0.790575555893047,0,0.141940085208269,1.95872164033981,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,21.9840246086834,0.448549638131936,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.838874755405687,8.69702834973622,14.977560325409,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0.29551344712669,0,0,0,0,0,0,0,0,0.463735671240843 | |||
|short_description=p2@Sox30 | |||
}} |
Revision as of 19:42, 12 September 2013
Short description: | p2@Sox30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sox30_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -36bp_to_ENSMUST00000049038, NM_173384, uc011xtj.1_5end |
EntrezGene: | Sox30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 2.38e-14 | 17 |
indifferent external genitalia | 2.38e-14 | 17 |
indifferent gonad | 2.38e-14 | 17 |
gonad | 1.38e-13 | 18 |
gonad primordium | 1.38e-13 | 18 |
reproductive organ | 2.47e-10 | 24 |
testis | 3.07e-10 | 14 |
male reproductive organ | 1.32e-09 | 15 |
reproductive structure | 1.40e-09 | 26 |
reproductive system | 1.40e-09 | 26 |
male organism | 4.76e-09 | 16 |
male reproductive system | 4.76e-09 | 16 |
body cavity | 7.14e-07 | 37 |
body cavity or lining | 7.14e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.