FFCP PHASE1:Mm9::chr4:155602649..155602679,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=231002|HGNC=|MCL_coexpression_id=0|UniProt=E9QP36,Q8C886|association_with_transcript=0bp_to_ENSMUST00000105571,NM_001008233,uc008wgp.2,uc012drk.1,uc012drl.1_5end|description=CAGE_peak_2_at_Plekhn1_5end|id=chr4:155602649..155602679,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000075,6.80e-08,7;CL:0000239,2.72e-07,6;CL:0000677,2.72e-07,6;CL:0000584,2.72e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.42e-11,47;UBERON:0000160,5.27e-11,31;UBERON:0001007,1.44e-07,116;UBERON:0001555,1.44e-07,116;UBERON:0007026,1.44e-07,116;UBERON:0004921,2.34e-07,114;UBERON:0000014,2.39e-07,5;UBERON:0001003,2.39e-07,5;UBERON:0002097,2.39e-07,5;UBERON:0002199,2.39e-07,5;UBERON:0007029,2.39e-07,5;UBERON:0007376,2.39e-07,5;UBERON:0002416,2.39e-07,5;UBERON:0007383,2.39e-07,5;UBERON:0004119,2.91e-07,118;UBERON:0000925,2.91e-07,118;UBERON:0006595,2.91e-07,118|phase1_expression=1.28119077683835,3.14077866875425,1.81999695755814,2.41971369045464,1.50268718983904,1.6787927191189,1.40167584357315,0,0,0,0.171217968225505,0,0.171200729931206,0,0,0,0,0,0,0,5.69790044012167,0,0,1.11994695955385,0.68822784320151,1.72269589234506,1.7230479846363,1.939241094173,0.380046838912748,2.26827116783938,2.88249663851896,0,0,0,0,0.332469290716985,0.204169356262369,0.837063261473815,0,0,0.588231488031014,0.683045484958446,1.45653105909346,1.51076181570693,1.4192770370732,2.0190142737785,0,0.218025156380447,0,0,0.979904951377538,0,0,0,0,0.771778308107841,0,0,0.202316460859598,0,0,0,0.889294796111139,0,1.97773272513395,0,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0.558365998002762,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.227178579999552,0.151143120213571,0.289864488701678,0,0,0,0,0,0.702222100658759,0.511290967734173,0.259786004602869,0.70667914902068,1.26759077799012,0,0,0,0.432982082022428,2.28023878927589,1.01104889002957,1.37020655662872,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0.915001205637253,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0,0,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,2.78047249225598,1.0447564995665,2.05782136407943,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0,1.32167513193519,1.58670339998127,0.213288250535234,0,0,0.80673409849337,0.667134131534611,1.33157938278791,1.42358718463353,1.31759163779209,4.02136334080431,3.58121649674071,2.14460495831032,1.79763881730844,1.51296634912286,1.39398891278057,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0.442830443938806,0.470996183524124,0.123397163921801,0.592905254174298,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0.509235257325564,0.234690248288502,0.502518772325447,0.714130922658041,1.17080188714679,0.788175720530955,1.32878813789265,0.797273843287435,0.655453258862952,0.172684981865896,1.3018415272336,1.50791283939272,2.17562273527484,0.491764273019036,3.86311444826625,0.160550589987792,0.117211686592203,0.983609672260053,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0.488660878060728,0.989820737835213,0,0,0.302323556964751,0.565815239267694,0.885905678642318,1.22974059177571,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.36175842301515,0.900305470156551,1.03486947026204,0.643011105094777,1.06404140185364,1.07021290561242,0.164549020602121,0.304464949114599,0.23467170806371,0.42366414172764,0.882113592219848,4.78170133530292,3.55221738730992,1.62844897306021,3.58117032009409,2.79039529566604,1.45740418314925,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,3.81868247206045,0,0,0.756037385752609,1.67270636811575,1.52853794622324,2.02296519577231,2.23164330458407,2.35580347785627,0.388844919875379,3.72803587852155,42.8406633399985,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0,0.2604087696879,0.314578033277133,9.18019659138823,16.7057403629562,0,1.01362607645082,1.64337531463724,1.55904987573354,1.79026695667481,1.19208812868759,0.240390899039938,1.18151621739662,0.706765149637033,0.838274873204998,0.302478555410522,0.194915761479505,0.481059208201647,0.233753804363138,3.85441652145859,0.443971906748129,0.0897138566094757,1.51096154727671,3.67060228661162,1.31377732815827,0.36630324853453,6.85978813053011,3.51100472824754,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0.253479299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| ||
|EntrezGene=231002 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=E9QP36,Q8C886 | |||
|association_with_transcript=0bp_to_ENSMUST00000105571,NM_001008233,uc008wgp.2,uc012drk.1,uc012drl.1_5end | |||
|description=CAGE_peak_2_at_Plekhn1_5end | |||
|id=chr4:155602649..155602679,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,6.80e-08,7;CL:0000239,2.72e-07,6;CL:0000677,2.72e-07,6;CL:0000584,2.72e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.42e-11,47;UBERON:0000160,5.27e-11,31;UBERON:0001007,1.44e-07,116;UBERON:0001555,1.44e-07,116;UBERON:0007026,1.44e-07,116;UBERON:0004921,2.34e-07,114;UBERON:0000014,2.39e-07,5;UBERON:0001003,2.39e-07,5;UBERON:0002097,2.39e-07,5;UBERON:0002199,2.39e-07,5;UBERON:0007029,2.39e-07,5;UBERON:0007376,2.39e-07,5;UBERON:0002416,2.39e-07,5;UBERON:0007383,2.39e-07,5;UBERON:0004119,2.91e-07,118;UBERON:0000925,2.91e-07,118;UBERON:0006595,2.91e-07,118 | |||
|phase1_expression=1.28119077683835,3.14077866875425,1.81999695755814,2.41971369045464,1.50268718983904,1.6787927191189,1.40167584357315,0,0,0,0.171217968225505,0,0.171200729931206,0,0,0,0,0,0,0,5.69790044012167,0,0,1.11994695955385,0.68822784320151,1.72269589234506,1.7230479846363,1.939241094173,0.380046838912748,2.26827116783938,2.88249663851896,0,0,0,0,0.332469290716985,0.204169356262369,0.837063261473815,0,0,0.588231488031014,0.683045484958446,1.45653105909346,1.51076181570693,1.4192770370732,2.0190142737785,0,0.218025156380447,0,0,0.979904951377538,0,0,0,0,0.771778308107841,0,0,0.202316460859598,0,0,0,0.889294796111139,0,1.97773272513395,0,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0.558365998002762,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.227178579999552,0.151143120213571,0.289864488701678,0,0,0,0,0,0.702222100658759,0.511290967734173,0.259786004602869,0.70667914902068,1.26759077799012,0,0,0,0.432982082022428,2.28023878927589,1.01104889002957,1.37020655662872,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0.915001205637253,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0,0,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,2.78047249225598,1.0447564995665,2.05782136407943,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0,1.32167513193519,1.58670339998127,0.213288250535234,0,0,0.80673409849337,0.667134131534611,1.33157938278791,1.42358718463353,1.31759163779209,4.02136334080431,3.58121649674071,2.14460495831032,1.79763881730844,1.51296634912286,1.39398891278057,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0.442830443938806,0.470996183524124,0.123397163921801,0.592905254174298,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0.509235257325564,0.234690248288502,0.502518772325447,0.714130922658041,1.17080188714679,0.788175720530955,1.32878813789265,0.797273843287435,0.655453258862952,0.172684981865896,1.3018415272336,1.50791283939272,2.17562273527484,0.491764273019036,3.86311444826625,0.160550589987792,0.117211686592203,0.983609672260053,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0.488660878060728,0.989820737835213,0,0,0.302323556964751,0.565815239267694,0.885905678642318,1.22974059177571,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.36175842301515,0.900305470156551,1.03486947026204,0.643011105094777,1.06404140185364,1.07021290561242,0.164549020602121,0.304464949114599,0.23467170806371,0.42366414172764,0.882113592219848,4.78170133530292,3.55221738730992,1.62844897306021,3.58117032009409,2.79039529566604,1.45740418314925,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,3.81868247206045,0,0,0.756037385752609,1.67270636811575,1.52853794622324,2.02296519577231,2.23164330458407,2.35580347785627,0.388844919875379,3.72803587852155,42.8406633399985,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0,0.2604087696879,0.314578033277133,9.18019659138823,16.7057403629562,0,1.01362607645082,1.64337531463724,1.55904987573354,1.79026695667481,1.19208812868759,0.240390899039938,1.18151621739662,0.706765149637033,0.838274873204998,0.302478555410522,0.194915761479505,0.481059208201647,0.233753804363138,3.85441652145859,0.443971906748129,0.0897138566094757,1.51096154727671,3.67060228661162,1.31377732815827,0.36630324853453,6.85978813053011,3.51100472824754,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.192075457214608,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0.588795680537589,0,0.70990322463735,0,0.145346416632329,0.282328141245992,0.338458431566706,0.73171189149109,0.526139422875686,0.407412341537585,0,0.474540072496697,0.394017929502254,1.22769312950907,0.619747364743864,0.771626443924566,0.499621155875892,0.935726433781634,0.859484216193193,0.382576664137687,0.661774257358546,0.463735671240843 | |||
|short_description=p2@Plekhn1 | |||
}} |
Revision as of 04:44, 14 September 2013
Short description: | p2@Plekhn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Plekhn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000105571, NM_001008233, uc008wgp.2, uc012drk.1, uc012drl.1_5end |
EntrezGene: | Plekhn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 6.80e-08 | 7 |
brush border epithelial cell | 2.72e-07 | 6 |
gut absorptive cell | 2.72e-07 | 6 |
enterocyte | 2.72e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.42e-11 | 47 |
intestine | 5.27e-11 | 31 |
digestive system | 1.44e-07 | 116 |
digestive tract | 1.44e-07 | 116 |
primitive gut | 1.44e-07 | 116 |
subdivision of digestive tract | 2.34e-07 | 114 |
zone of skin | 2.39e-07 | 5 |
skin epidermis | 2.39e-07 | 5 |
skin of body | 2.39e-07 | 5 |
integument | 2.39e-07 | 5 |
surface | 2.39e-07 | 5 |
outer epithelium | 2.39e-07 | 5 |
integumental system | 2.39e-07 | 5 |
enveloping layer of ectoderm | 2.39e-07 | 5 |
endoderm-derived structure | 2.91e-07 | 118 |
endoderm | 2.91e-07 | 118 |
presumptive endoderm | 2.91e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.