FFCP PHASE1:Mm9::chr1:89024948..89024963,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:89024948..89024963,+|id=chr1:89024948..89024963,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.80e-13!43;UBERON:0000344!2.93e-12!15;UBERON:0001962!1.16e-11!2;UBERON:0001961!1.16e-11!2;UBERON:0001744!1.16e-11!2;UBERON:0005409!2.71e-11!59;UBERON:0002465!4.62e-08!3;UBERON:0004923!1.67e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001962,4.89e-20,2;UBERON:0001961,4.89e-20,2;UBERON:0001744,4.89e-20,2;UBERON:0000160,2.33e-15,31;UBERON:0002465,1.04e-13,3;UBERON:0003199,8.99e-11,1;UBERON:0000344,1.08e-10,15;UBERON:0005409,4.44e-10,47;UBERON:0004923,8.36e-07,24|phase1_expression=0,0,0,1.51232105653415,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,2.52350209173887,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.3092515671601,0.528901133327089,0,0,0,0,0,0,13.7613427847908,0,0,0,0,8.98819408654222,0.864552199498777,12.3467589417708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:89024948..89024963,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:89024948..89024963,+ | |||
|id=chr1:89024948..89024963,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.80e-13!43;UBERON:0000344!2.93e-12!15;UBERON:0001962!1.16e-11!2;UBERON:0001961!1.16e-11!2;UBERON:0001744!1.16e-11!2;UBERON:0005409!2.71e-11!59;UBERON:0002465!4.62e-08!3;UBERON:0004923!1.67e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,4.89e-20,2;UBERON:0001961,4.89e-20,2;UBERON:0001744,4.89e-20,2;UBERON:0000160,2.33e-15,31;UBERON:0002465,1.04e-13,3;UBERON:0003199,8.99e-11,1;UBERON:0000344,1.08e-10,15;UBERON:0005409,4.44e-10,47;UBERON:0004923,8.36e-07,24 | |||
|phase1_expression=0,0,0,1.51232105653415,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,2.52350209173887,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.3092515671601,0.528901133327089,0,0,0,0,0,0,13.7613427847908,0,0,0,0,8.98819408654222,0.864552199498777,12.3467589417708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:89024948..89024963,+ | |||
}} |
Revision as of 21:10, 13 September 2013
Short description: | p@chr1:89024948..89024963, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:89024948..89024963, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 4.89e-20 | 2 |
mucosa-associated lymphoid tissue | 4.89e-20 | 2 |
lymphoid tissue | 4.89e-20 | 2 |
intestine | 2.33e-15 | 31 |
lymphoid system | 1.04e-13 | 3 |
egg chamber | 8.99e-11 | 1 |
mucosa | 1.08e-10 | 15 |
gastrointestinal system | 4.44e-10 | 47 |
organ component layer | 8.36e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.