Personal tools

FFCP PHASE1:Mm9::chr9:20189534..20189590,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=434377|HGNC=|UniProt=Q3URI6|association_with_transcript=11bp_to_NM_001004190,uc009oij.1_5end|description=CAGE_peak_1_at_Zfp560_5end|id=chr9:20189534..20189590,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.30e-08!34;UBERON:0000033!1.70e-07!63;UBERON:0002791!2.23e-07!29;UBERON:0003528!2.23e-07!29;UBERON:0001893!2.23e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.30e-08,34;UBERON:0002346,1.31e-07,64;UBERON:0003075,1.31e-07,64;UBERON:0007284,1.31e-07,64;UBERON:0010314,2.04e-07,92;UBERON:0003528,2.23e-07,29;UBERON:0002791,2.23e-07,29;UBERON:0001893,2.23e-07,29|phase1_expression=15.6945870162698,4.88565570695105,8.64498554840118,3.32710632437513,2.00358291978539,5.37213670118047,6.07392865548367,10.5881125222093,2.111830832275,1.87251621057595,11.3003859028833,10.6894693053751,9.92964233600993,9.61624426608971,4.33042690360362,3.03712901084739,6.29605690315332,7.72882305127682,9.87223921961319,10.6097412949508,8.75945888556019,11.2198774857,13.5823890352246,7.67963629408352,11.0116454912242,12.6331032105304,12.9228598847722,7.32602191132023,7.79096019771133,8.82105454159758,7.31710685162506,1.90509202037889,5.53558308826113,0,8.37669697278696,7.81302833184914,5.9209113316087,5.85944283031671,9.37602413428561,5.75876118371178,1.76469446409304,4.78131839470912,4.85510353031154,9.19046771221714,8.31290836000019,7.89251034295231,9.38869613217647,13.7355848519681,9.88587822305123,10.4992145500113,5.45947044338914,7.18762821824858,10.5703041816374,8.70434570413613,9.41062637598899,7.20326420900652,12.8940047972441,12.8918023069361,9.3065571995415,13.7537654610729,10.775133859605,8.4711133017283,4.4464739805557,9.89889689009539,7.9109309005358,12.0781619540837,7.49000276296012,6.14749288514487,13.4796496001021,12.6905582031789,10.7265730289205,13.4255962669788,11.9269012113871,12.2490799214954,13.801747826626,17.4651569455904,9.91042928994498,9.83192503255945,7.0659005297872,9.62769900430415,11.7104183811084,12.5019208933622,6.70039197603314,8.4414391504752,12.835052813252,7.66034322231536,10.9626194215309,10.2519695203915,11.2074766133112,6.65029728939713,11.3047150593654,8.60423876981386,6.11974200336975,4.31762553310254,5.19821133958135,5.82434953226536,7.5839986871146,8.35108580632483,10.1316541795119,6.36011234118612,15.7744630149882,6.41632387071589,2.54805239706646,0,12.3399893376392,14.1881524666055,14.6602089054287,7.4219521817389,14.5005214842416,7.86743337043571,6.59244241711316,6.08930956624282,5.07354093963329,9.49552635481522,7.76085467095652,5.15233024451669,7.41584903203122,7.95296463059514,4.42305275974937,9.05894359705491,5.30019644304944,4.84875253135222,13.0474232852686,14.9318206475889,10.0534419270458,5.62005521458901,11.7418822015802,14.9975682748352,14.9942867946216,7.9389038884556,10.980014467647,12.8167439155122,9.21268897019065,9.46147192122223,7.2725815595846,7.78758062725237,12.6280811174392,6.96679035416521,17.4378703319236,5.6819301089348,9.10843100738926,9.88579049063934,10.0834792690996,12.5084998803643,11.2260223599691,11.4021211053516,10.3071897015702,11.3829483125167,6.03590380211958,11.535470890237,13.1963343122962,7.01426343768239,12.7901734643775,9.05455632957633,10.2891068203972,9.55364480728767,11.2354109970118,11.5806558201622,10.7982129770325,5.17814431338755,8.91199027928165,7.92273070428465,8.99629995223799,10.6252685143598,10.0273623376796,9.76642567951713,8.58474884478781,11.0927075248811,11.3546296440302,12.3125598059321,6.16122952548504,8.33339928324394,7.68425403518677,9.79706856950714,8.83217783969334,13.8921226712034,3.63460661282178,3.96675849995316,9.38468302355029,8.82499353069666,7.7320476793256,4.63872106633688,6.89371935919098,7.79925067061493,4.74529061544512,4.77626968699632,8.29406189040889,6.96347652144028,5.65395852645448,3.59527763461689,3.02593269824572,5.77509692437665,4.55202962287396,9.71112357182695,15.7790829942313,10.1825663922657,10.861339281387,9.95928642442524,11.4458132194906,8.41377843483732,8.79192875911699,8.76119863844784,5.92905254174298,3.50374722003798,3.93117990226406,4.72210436008193,2.63718157805054,4.58236603529592,3.8193877767213,4.31544206176216,8.59316701907687,4.66754402419738,2.87536413054709,4.83783231969054,5.61667811606209,6.56705082662491,7.71408878144222,7.71909634181387,10.7156850296631,8.52711352967181,6.84452901056509,8.65699937453459,11.7345124144251,11.7254380209271,9.99783291721258,10.1469496886055,13.0837169608139,12.6234873099802,10.0456504254217,9.5040722535128,9.49767400262426,11.4272756279394,6.03165135757089,7.07077388964322,3.44234991113325,5.51873492609465,7.22477654945064,8.67366480782304,6.88526770582037,10.6037789425837,7.2566890465739,6.24701990874622,10.7711698866399,8.12493913038677,10.9171350300373,7.92614286208731,6.07216052512342,15.1973046113882,8.69633111482352,10.6036034419196,10.3616262202036,5.87616492101942,11.0763132360432,13.1976098378028,1.32745138339963,6.5550771761845,5.74414758233027,8.11001842950362,4.42952839321159,7.68587869859819,7.23599220871019,7.27067458955011,9.9819265947722,6.32073515871632,5.27093042874994,4.12542172992747,10.5536277783674,7.92268813737765,2.58717367565509,8.78781843629528,9.22169214939823,6.95638388648075,9.3792941743209,3.95804433848979,7.27482294997502,11.4389318266463,5.73373834942901,7.09010887648364,9.04200789497071,8.38349656501366,5.252383136138,3.61109979439135,4.66369338607761,8.52956389248344,3.93003025835061,7.84270098260245,4.07427960213366,3.76736914009382,4.64760374251486,5.0331198105435,9.68877050964975,11.1961161858926,13.4053974590291,12.4107180341965,8.06656783631895,8.3360981522008,9.28845931067491,8.78170843260769,6.33251434863915,8.22672512947406,7.68677138245624,5.23511883968059,7.2584385043404,7.45607175704311,19.7292528539467,10.7651913151665,8.60384150376908,9.33365704051429,9.68698676082983,13.0096216627899,12.2051528191584,9.89553324814021,9.33248165388827,13.2871266454303,11.8092302565725,4.74016680942267,4.66267995167378,6.57350125854894,5.58659538804519,6.26593434836185,5.56307793387542,7.81270421879797,7.38447635872886,9.89471209491847,8.83998957197998,8.77187810690513,5.84747284438514,8.75527758926998,11.6876902181569,4.76133805591944,4.66170502085536,3.85769583420746,1.67884616364078,9.27310051354514,7.88266396894964,12.8206136987086,9.21784030039983,14.5455910170255,10.7302850097243,10.5874804396651,9.16632821503035,12.2015759464018,12.3314853558716,9.06472676867641,8.77529250301348,12.6089936902782,9.06284817968409,8.80192529978094,7.5764763736449,13.5668456956351,9.56108192223151,9.48116196566347,6.91723436672342,4.04455718590031,8.00088220085815,8.03536723231687,7.38114182061175,8.08631077644152,8.61829619626815,6.60192194851267,9.17686773204848,6.91471645972588,6.31790158511746,7.62069906052918,8.69132444586416,9.06673336179414,8.24171801606613,7.21274708658547,4.4573002810104,6.74408063405482,10.7296285476294,8.1393993314104,6.96409415073447,7.53070010235921,8.59761472502031,8.15516105457313,6.65440157844723,6.73370725989286,6.4062909787054,6.69830480153832,8.18462086339379,8.83139994760006,6.75173138433995,5.74564329257276,8.4215379040347,7.95022899978704,9.18183993930448,6.61774257358547,8.81097775357602|short_description=p1@Zfp560}}
|EntrezGene=434377
|HGNC=
|UniProt=Q3URI6
|association_with_transcript=11bp_to_NM_001004190,uc009oij.1_5end
|description=CAGE_peak_1_at_Zfp560_5end
|id=chr9:20189534..20189590,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!2.30e-08!34;UBERON:0000033!1.70e-07!63;UBERON:0002791!2.23e-07!29;UBERON:0003528!2.23e-07!29;UBERON:0001893!2.23e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.30e-08,34;UBERON:0002346,1.31e-07,64;UBERON:0003075,1.31e-07,64;UBERON:0007284,1.31e-07,64;UBERON:0010314,2.04e-07,92;UBERON:0003528,2.23e-07,29;UBERON:0002791,2.23e-07,29;UBERON:0001893,2.23e-07,29
|phase1_expression=15.6945870162698,4.88565570695105,8.64498554840118,3.32710632437513,2.00358291978539,5.37213670118047,6.07392865548367,10.5881125222093,2.111830832275,1.87251621057595,11.3003859028833,10.6894693053751,9.92964233600993,9.61624426608971,4.33042690360362,3.03712901084739,6.29605690315332,7.72882305127682,9.87223921961319,10.6097412949508,8.75945888556019,11.2198774857,13.5823890352246,7.67963629408352,11.0116454912242,12.6331032105304,12.9228598847722,7.32602191132023,7.79096019771133,8.82105454159758,7.31710685162506,1.90509202037889,5.53558308826113,0,8.37669697278696,7.81302833184914,5.9209113316087,5.85944283031671,9.37602413428561,5.75876118371178,1.76469446409304,4.78131839470912,4.85510353031154,9.19046771221714,8.31290836000019,7.89251034295231,9.38869613217647,13.7355848519681,9.88587822305123,10.4992145500113,5.45947044338914,7.18762821824858,10.5703041816374,8.70434570413613,9.41062637598899,7.20326420900652,12.8940047972441,12.8918023069361,9.3065571995415,13.7537654610729,10.775133859605,8.4711133017283,4.4464739805557,9.89889689009539,7.9109309005358,12.0781619540837,7.49000276296012,6.14749288514487,13.4796496001021,12.6905582031789,10.7265730289205,13.4255962669788,11.9269012113871,12.2490799214954,13.801747826626,17.4651569455904,9.91042928994498,9.83192503255945,7.0659005297872,9.62769900430415,11.7104183811084,12.5019208933622,6.70039197603314,8.4414391504752,12.835052813252,7.66034322231536,10.9626194215309,10.2519695203915,11.2074766133112,6.65029728939713,11.3047150593654,8.60423876981386,6.11974200336975,4.31762553310254,5.19821133958135,5.82434953226536,7.5839986871146,8.35108580632483,10.1316541795119,6.36011234118612,15.7744630149882,6.41632387071589,2.54805239706646,0,12.3399893376392,14.1881524666055,14.6602089054287,7.4219521817389,14.5005214842416,7.86743337043571,6.59244241711316,6.08930956624282,5.07354093963329,9.49552635481522,7.76085467095652,5.15233024451669,7.41584903203122,7.95296463059514,4.42305275974937,9.05894359705491,5.30019644304944,4.84875253135222,13.0474232852686,14.9318206475889,10.0534419270458,5.62005521458901,11.7418822015802,14.9975682748352,14.9942867946216,7.9389038884556,10.980014467647,12.8167439155122,9.21268897019065,9.46147192122223,7.2725815595846,7.78758062725237,12.6280811174392,6.96679035416521,17.4378703319236,5.6819301089348,9.10843100738926,9.88579049063934,10.0834792690996,12.5084998803643,11.2260223599691,11.4021211053516,10.3071897015702,11.3829483125167,6.03590380211958,11.535470890237,13.1963343122962,7.01426343768239,12.7901734643775,9.05455632957633,10.2891068203972,9.55364480728767,11.2354109970118,11.5806558201622,10.7982129770325,5.17814431338755,8.91199027928165,7.92273070428465,8.99629995223799,10.6252685143598,10.0273623376796,9.76642567951713,8.58474884478781,11.0927075248811,11.3546296440302,12.3125598059321,6.16122952548504,8.33339928324394,7.68425403518677,9.79706856950714,8.83217783969334,13.8921226712034,3.63460661282178,3.96675849995316,9.38468302355029,8.82499353069666,7.7320476793256,4.63872106633688,6.89371935919098,7.79925067061493,4.74529061544512,4.77626968699632,8.29406189040889,6.96347652144028,5.65395852645448,3.59527763461689,3.02593269824572,5.77509692437665,4.55202962287396,9.71112357182695,15.7790829942313,10.1825663922657,10.861339281387,9.95928642442524,11.4458132194906,8.41377843483732,8.79192875911699,8.76119863844784,5.92905254174298,3.50374722003798,3.93117990226406,4.72210436008193,2.63718157805054,4.58236603529592,3.8193877767213,4.31544206176216,8.59316701907687,4.66754402419738,2.87536413054709,4.83783231969054,5.61667811606209,6.56705082662491,7.71408878144222,7.71909634181387,10.7156850296631,8.52711352967181,6.84452901056509,8.65699937453459,11.7345124144251,11.7254380209271,9.99783291721258,10.1469496886055,13.0837169608139,12.6234873099802,10.0456504254217,9.5040722535128,9.49767400262426,11.4272756279394,6.03165135757089,7.07077388964322,3.44234991113325,5.51873492609465,7.22477654945064,8.67366480782304,6.88526770582037,10.6037789425837,7.2566890465739,6.24701990874622,10.7711698866399,8.12493913038677,10.9171350300373,7.92614286208731,6.07216052512342,15.1973046113882,8.69633111482352,10.6036034419196,10.3616262202036,5.87616492101942,11.0763132360432,13.1976098378028,1.32745138339963,6.5550771761845,5.74414758233027,8.11001842950362,4.42952839321159,7.68587869859819,7.23599220871019,7.27067458955011,9.9819265947722,6.32073515871632,5.27093042874994,4.12542172992747,10.5536277783674,7.92268813737765,2.58717367565509,8.78781843629528,9.22169214939823,6.95638388648075,9.3792941743209,3.95804433848979,7.27482294997502,11.4389318266463,5.73373834942901,7.09010887648364,9.04200789497071,8.38349656501366,5.252383136138,3.61109979439135,4.66369338607761,8.52956389248344,3.93003025835061,7.84270098260245,4.07427960213366,3.76736914009382,4.64760374251486,5.0331198105435,9.68877050964975,11.1961161858926,13.4053974590291,12.4107180341965,8.06656783631895,8.3360981522008,9.28845931067491,8.78170843260769,6.33251434863915,8.22672512947406,7.68677138245624,5.23511883968059,7.2584385043404,7.45607175704311,19.7292528539467,10.7651913151665,8.60384150376908,9.33365704051429,9.68698676082983,13.0096216627899,12.2051528191584,9.89553324814021,9.33248165388827,13.2871266454303,11.8092302565725,4.74016680942267,4.66267995167378,6.57350125854894,5.58659538804519,6.26593434836185,5.56307793387542,7.81270421879797,7.38447635872886,9.89471209491847,8.83998957197998,8.77187810690513,5.84747284438514,8.75527758926998,11.6876902181569,4.76133805591944,4.66170502085536,3.85769583420746,1.67884616364078,9.27310051354514,7.88266396894964,12.8206136987086,9.21784030039983,14.5455910170255,10.7302850097243,10.5874804396651,9.16632821503035,12.2015759464018,12.3314853558716,9.06472676867641,8.77529250301348,12.6089936902782,9.06284817968409,8.80192529978094,7.5764763736449,13.5668456956351,9.56108192223151,9.48116196566347,6.91723436672342,4.04455718590031,8.00088220085815,8.03536723231687,7.38114182061175,8.08631077644152,8.61829619626815,6.60192194851267,9.17686773204848,6.91471645972588,6.31790158511746,7.62069906052918,8.69132444586416,9.06673336179414,8.24171801606613,7.21274708658547,4.4573002810104,6.74408063405482,10.7296285476294,8.1393993314104,6.96409415073447,7.53070010235921,8.59761472502031,8.15516105457313,6.65440157844723,6.73370725989286,6.4062909787054,6.69830480153832,8.18462086339379,8.83139994760006,6.75173138433995,5.74564329257276,8.4215379040347,7.95022899978704,9.18183993930448,6.61774257358547,8.81097775357602
|short_description=p1@Zfp560
}}

Revision as of 17:23, 14 September 2013

Short description:p1@Zfp560
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zfp560_5end
Coexpression cluster:NA
Association with transcript: 11bp_to_NM_001004190, uc009oij.1_5end
EntrezGene:Zfp560
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zfp560

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.69
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.93
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.58
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.01
GP2+ M cell, pool1.CNhs13228.11845-124H912.63
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I27.33
Ileum epithelium, pool1.CNhs13199.10252-104B97.79
Ileum epithelium, pool2.CNhs13232.10253-104C18.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.89
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.57
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.08
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.48
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.69
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.93
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.80
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.25
Mouse Schwann, donor1.CNhs12507.11728-123D911.21
Mouse Schwann, donor2.CNhs12573.11746-123F96.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.30
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.19
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.66
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.42
accessory axillary lymph node, adult.CNhs10475.1063-29H914.50
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F59.50
adrenal gland, neonate N00.CNhs11191.1311-23C17.76
adrenal gland, neonate N25.CNhs11223.1377-27I35.15
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H17.95
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F59.06
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B214.93
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.74
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.99
corpora quadrigemina, adult.CNhs10501.16-22A47.94
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F112.82
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.97
epididymis, adult.CNhs10490.58-23B217.44
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C69.11
eyeball, embryo E14.CNhs10521.399-16E29.89
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D412.51
eyeball, neonate N00.CNhs11207.633-15C611.23
eyeball, neonate N01.CNhs11140.1532-43E711.40
eyeball, neonate N02.CNhs11205.1551-44G810.31
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E26.04
forelimb, embryo E12.CNhs10600.359-14H211.54
forelimb, embryo E13.CNhs10589.384-1E213.20
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B510.29
gonad, embryo E13.CNhs11044.1564-45I69.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.58
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.80
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F58.91
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C810.63
heart, embryo E16.CNhs11021.457-17C610.03
heart, embryo E17.CNhs11025.479-18E59.77
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E311.09
heart, neonate N03.CNhs11221.1349-25I211.35
heart, neonate N10.CNhs11118.749-24G112.31
heart, neonate N16.CNhs11209.782-15G16.16
heart, neonate N20.CNhs11127.821-26I68.33
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D29.80
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G113.89
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I59.38
intestine, embryo E13.CNhs11010.381-16D58.82
intestine, embryo E15.CNhs10602.976-16D87.73
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F77.80
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F89.71
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I210.18
kidney, embryo E18.CNhs11001.1288-20C710.86
kidney, neonate N00.CNhs11214.646-21G79.96
kidney, neonate N10.CNhs11206.758-6D511.45
kidney, neonate N20.CNhs11113.832-19I18.41
kidney, neonate N25.CNhs11122.1353-25F38.79
kidney, neonate N30.CNhs11203.1385-42H18.76
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F48.59
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B110.72
lung, embryo E12.CNhs10522.354-16G28.53
lung, embryo E14.CNhs10604.404-26F86.84
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B611.73
lung, embryo E17.CNhs10605.480-44A611.73
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C610.15
lung, neonate N06.CNhs11212.683-20E513.08
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E610.05
lung, neonate N20.CNhs11109.822-18A49.50
lung, neonate N25.CNhs11119.1359-25C79.50
lung, neonate N30.CNhs11133.1394-42H211.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A38.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.60
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.20
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I710.36
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I411.08
oviduct, adult pregnant day01.CNhs10500.988-6G613.20
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F46.56
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E67.92
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B99.22
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F59.38
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I77.27
placenta, adult pregnant day17.CNhs10464.577-18G311.44
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C37.09
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H38.38
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C98.53
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C17.84
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H14.65
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.41
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E38.07
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D49.29
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B88.23
stomach, neonate N07.CNhs11210.718-18A97.69
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I17.26
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G519.73
testis, embryo E13.CNhs11031.389-23F510.77
testis, embryo E15.CNhs11034.443-27C58.60
testis, embryo E16.CNhs11033.470-26G59.33
testis, embryo E17.CNhs11029.486-18I59.69
testis, embryo E18.CNhs11027.503-18G513.01
testis, neonate N00.CNhs11189.1300-22B712.21
testis, neonate N07.CNhs11222.726-26I49.90
testis, neonate N10.CNhs11204.763-44D99.33
testis, neonate N20.CNhs11110.839-18H313.29
testis, neonate N30.CNhs11130.1391-42E211.81
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I26.57
thymus, embryo E16.CNhs11002.456-26C55.59
thymus, embryo E17.CNhs10581.478-18C16.27
thymus, embryo E18.CNhs10595.1273-19G45.56
thymus, neonate N02.CNhs11181.1541-43F87.81
thymus, neonate N03.CNhs11137.2104-43C77.38
thymus, neonate N06.CNhs11197.681-26C49.89
thymus, neonate N07.CNhs11211.713-19D38.84
thymus, neonate N10.CNhs11194.748-24E48.77
thymus, neonate N20.CNhs11186.820-7A25.85
thymus, neonate N25.CNhs11125.1362-25G78.76
thymus, neonate N30.CNhs11132.1393-42G211.69
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E49.27
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E512.82
vagina, adult.CNhs10502.89-27D59.22
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I87.58
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H29.56
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.83
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C69.18
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B48.81





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:20189534..20189590,-&oldid=3059263"