FFCP PHASE1:Mm9::chr9:77961039..77961055,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56542|HGNC=|MCL_coexpression_id=22|UniProt=Q69ZV0,Q9JKV2,Q3UZZ3|association_with_transcript=0bp_to_ENSMUST00000142776,NM_019987,uc009qtu.2,uc009qtv.2_5end|description=CAGE_peak_4_at_Ick_5end|id=chr9:77961039..77961055,+|ontology_enrichment_celltype=CL:0000117!6.22e-08!23;CL:0000337!6.22e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-08,23;CL:0000337,1.15e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.82e-07!71;UBERON:0003075!1.82e-07!71;UBERON:0007284!1.82e-07!71;UBERON:0000153!2.52e-07!94;UBERON:0000033!4.45e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.66e-08,64;UBERON:0003075,2.66e-08,64;UBERON:0007284,2.66e-08,64;UBERON:0010371,1.66e-07,73|phase1_expression=1.44133962394315,1.39590163055744,0,0.90739263392049,0,0,0.233612640595526,0.516493293766305,0.140788722151667,0,0,0.159544317990673,0.513602189793617,0.34968160967599,0.666219523631325,0.404950534779652,0,0,0.274228867211478,0,0.510259740906419,0.794327609607082,0.783599367416806,0.159992422793407,0,0,0.430761996159075,0.646413698057667,0.570070258369122,0.756090389279792,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0.664938581433969,1.02084678131185,0.837063261473815,0,0,0,0,0,2.51793635951155,1.52065396829272,0.917733760808408,3.12956537739216,1.30815093828268,0.219686182734472,0.58328969722285,1.1198913730029,0,0,0.725362142011344,0.672187598284928,1.02903774414379,0.85960031981627,1.03134418455488,4.45096213891115,5.28990979272033,5.70448263155561,0.677689064138264,0,0,0,0,0.599200221036809,0,5.70292867696627,3.51015439662396,4.6271491497304,1.71390590642282,2.65042249141936,4.65465037016825,3.92966431174769,1.83843757322004,0,1.53224805702225,1.38245879930619,5.80299666012853,5.21479568533735,6.77187381723788,0.837548997004143,0.56276261003168,1.22238598221448,4.71405736757868,2.13557521198654,4.47358669980721,0.302904773332736,0.604572480854284,1.44932244350839,0,0,0,0,0,0.561777680527007,0.852151612890289,0.259786004602869,0.70667914902068,1.69012103732017,0,0,0,0,1.01343946190039,0.505524445014783,0.5709193985953,0.517875767294343,0.445326417194474,1.04091196059682,0.608930956624282,0.922461989024234,0.753613202763113,1.76383060703557,1.13099932196708,0.988779870937496,1.15679485535929,0.884610551949874,1.7794353494215,0.662524555381181,0,0,2.34224637609238,1.25668024088073,0.510914110417183,0.479260498023681,0,1.39777249780371,2.09706895166752,1.37250180845588,7.79056983099759,1.04294592115366,2.55715457330331,1.24672826735736,1.46017136760982,3.1570202793598,0.995255764880744,0.252722758433675,2.73574412652416,2.47228841629137,2.06911893990126,1.26043490863744,2.71268672104287,2.4493139694478,3.45907044769094,2.24884138943349,3.3631438196072,1.72454394346274,4.72765200419548,3.87092473160687,2.41115305670332,1.66828349535359,3.1342694986995,2.05782136407943,2.7864797354589,0,1.02939162845886,0.852490498186778,1.44988040774851,1.64168241986767,0.36012412292203,1.42046841351126,1.18058539048442,0.771335564436891,0.697601834251224,1.07309360559848,0.350296027101508,0.493679549740441,0.820837320395476,0.972825714550269,1.31579988682799,0.219550115291051,1.20785776884335,0.420579897128254,9.05560588937703,1.32167513193519,0.264450566663544,2.34617075588757,3.48355007790658,2.70621668776396,1.61346819698674,2.00140239460383,1.52180500890047,0.474529061544512,1.64698954724011,1.25667604400135,0.397912944082302,1.55971269695296,0,0,0.995706366271836,0.948339504765408,2.51346727741403,1.1270773567308,0.610953983535943,1.55161989734101,0.98190147846446,0.632365371242573,0.590440591918409,1.56998727841375,0.493588655687202,0,0.333690211432188,0.786235980452812,1.12431056192427,0.405720242777006,0.482354319504834,0,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.923765950833023,1.70542270593436,0.814824882210129,1.18821560042632,0.234690248288502,0.670025029767263,0.714130922658041,1.56106918286239,1.26108115284953,0.8858587585951,1.91345722388985,1.80249646187312,0.345369963731791,1.01254341007058,0,1.63171705145613,0.983528546038072,1.37968373152366,0.80275294993896,1.28932855251423,0.819674726883377,0.252470927204373,0.315508219416257,1.17131623288992,1.29254038639679,0.955875191810208,1.11399337041197,0.566153061577665,0.404810701674894,1.16902343164525,1.58115111178609,2.89189184779626,2.2710413633323,1.95872164033981,2.11753047159649,2.14461159864296,0,1.69946445308487,0.604647113929502,0.754420319023592,1.18120757152309,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,0,1.03135543248187,0.680879211507576,1.62054984628179,1.55230420539305,1.71469628025274,1.41872186913819,1.60531935841864,3.29098041204242,1.2178597964584,0.23467170806371,0,0,0.49465875882444,1.61464426695906,0.965006798850494,1.43246812803764,0.492422699235184,2.04036585640896,0.927126510052548,0.854354403989263,1.03193433981611,0.185194527369712,0.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| ||
|EntrezGene=56542 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=Q69ZV0,Q9JKV2,Q3UZZ3 | |||
|association_with_transcript=0bp_to_ENSMUST00000142776,NM_019987,uc009qtu.2,uc009qtv.2_5end | |||
|description=CAGE_peak_4_at_Ick_5end | |||
|id=chr9:77961039..77961055,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.22e-08!23;CL:0000337!6.22e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-08,23;CL:0000337,1.15e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.82e-07!71;UBERON:0003075!1.82e-07!71;UBERON:0007284!1.82e-07!71;UBERON:0000153!2.52e-07!94;UBERON:0000033!4.45e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.66e-08,64;UBERON:0003075,2.66e-08,64;UBERON:0007284,2.66e-08,64;UBERON:0010371,1.66e-07,73 | |||
|phase1_expression=1.44133962394315,1.39590163055744,0,0.90739263392049,0,0,0.233612640595526,0.516493293766305,0.140788722151667,0,0,0.159544317990673,0.513602189793617,0.34968160967599,0.666219523631325,0.404950534779652,0,0,0.274228867211478,0,0.510259740906419,0.794327609607082,0.783599367416806,0.159992422793407,0,0,0.430761996159075,0.646413698057667,0.570070258369122,0.756090389279792,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0.664938581433969,1.02084678131185,0.837063261473815,0,0,0,0,0,2.51793635951155,1.52065396829272,0.917733760808408,3.12956537739216,1.30815093828268,0.219686182734472,0.58328969722285,1.1198913730029,0,0,0.725362142011344,0.672187598284928,1.02903774414379,0.85960031981627,1.03134418455488,4.45096213891115,5.28990979272033,5.70448263155561,0.677689064138264,0,0,0,0,0.599200221036809,0,5.70292867696627,3.51015439662396,4.6271491497304,1.71390590642282,2.65042249141936,4.65465037016825,3.92966431174769,1.83843757322004,0,1.53224805702225,1.38245879930619,5.80299666012853,5.21479568533735,6.77187381723788,0.837548997004143,0.56276261003168,1.22238598221448,4.71405736757868,2.13557521198654,4.47358669980721,0.302904773332736,0.604572480854284,1.44932244350839,0,0,0,0,0,0.561777680527007,0.852151612890289,0.259786004602869,0.70667914902068,1.69012103732017,0,0,0,0,1.01343946190039,0.505524445014783,0.5709193985953,0.517875767294343,0.445326417194474,1.04091196059682,0.608930956624282,0.922461989024234,0.753613202763113,1.76383060703557,1.13099932196708,0.988779870937496,1.15679485535929,0.884610551949874,1.7794353494215,0.662524555381181,0,0,2.34224637609238,1.25668024088073,0.510914110417183,0.479260498023681,0,1.39777249780371,2.09706895166752,1.37250180845588,7.79056983099759,1.04294592115366,2.55715457330331,1.24672826735736,1.46017136760982,3.1570202793598,0.995255764880744,0.252722758433675,2.73574412652416,2.47228841629137,2.06911893990126,1.26043490863744,2.71268672104287,2.4493139694478,3.45907044769094,2.24884138943349,3.3631438196072,1.72454394346274,4.72765200419548,3.87092473160687,2.41115305670332,1.66828349535359,3.1342694986995,2.05782136407943,2.7864797354589,0,1.02939162845886,0.852490498186778,1.44988040774851,1.64168241986767,0.36012412292203,1.42046841351126,1.18058539048442,0.771335564436891,0.697601834251224,1.07309360559848,0.350296027101508,0.493679549740441,0.820837320395476,0.972825714550269,1.31579988682799,0.219550115291051,1.20785776884335,0.420579897128254,9.05560588937703,1.32167513193519,0.264450566663544,2.34617075588757,3.48355007790658,2.70621668776396,1.61346819698674,2.00140239460383,1.52180500890047,0.474529061544512,1.64698954724011,1.25667604400135,0.397912944082302,1.55971269695296,0,0,0.995706366271836,0.948339504765408,2.51346727741403,1.1270773567308,0.610953983535943,1.55161989734101,0.98190147846446,0.632365371242573,0.590440591918409,1.56998727841375,0.493588655687202,0,0.333690211432188,0.786235980452812,1.12431056192427,0.405720242777006,0.482354319504834,0,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.923765950833023,1.70542270593436,0.814824882210129,1.18821560042632,0.234690248288502,0.670025029767263,0.714130922658041,1.56106918286239,1.26108115284953,0.8858587585951,1.91345722388985,1.80249646187312,0.345369963731791,1.01254341007058,0,1.63171705145613,0.983528546038072,1.37968373152366,0.80275294993896,1.28932855251423,0.819674726883377,0.252470927204373,0.315508219416257,1.17131623288992,1.29254038639679,0.955875191810208,1.11399337041197,0.566153061577665,0.404810701674894,1.16902343164525,1.58115111178609,2.89189184779626,2.2710413633323,1.95872164033981,2.11753047159649,2.14461159864296,0,1.69946445308487,0.604647113929502,0.754420319023592,1.18120757152309,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,0,1.03135543248187,0.680879211507576,1.62054984628179,1.55230420539305,1.71469628025274,1.41872186913819,1.60531935841864,3.29098041204242,1.2178597964584,0.23467170806371,0,0,0.49465875882444,1.61464426695906,0.965006798850494,1.43246812803764,0.492422699235184,2.04036585640896,0.927126510052548,0.854354403989263,1.03193433981611,0.185194527369712,0.753473828018764,0.410082683163076,0.457556346413045,2.88963330989554,1.81936888020755,2.21119958087078,0,1.10717597753397,2.43983360552218,1.29606408986162,0.836353184057875,1.09181281873089,0.674321731924103,1.90102948168273,0.523511883968059,0.518459893167171,0.621339313086926,0,1.34564891439581,1.32366792365678,1.16670713006429,1.29159823477731,2.19642963138012,2.46450201156083,1.43224823328345,1.25831213310853,0.483168241652012,0.288030006257865,2.21207784439725,1.21635129174099,1.33524244314275,1.81889152168913,0.895133478337407,1.39076948346885,1.56254084375959,1.32920574457119,2.01932899896295,1.98137697303,1.81487133246313,2.24153125701431,1.6356013078856,2.68816875017609,1.13365191807606,0.221985953374065,0.538283139656854,0,0.386379188064381,0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| |||
|short_description=p4@Ick | |||
}} | |||
Revision as of 18:50, 14 September 2013
| Short description: | p4@Ick |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Ick_5end |
| Coexpression cluster: | MCL_coexpression_mm9:22 |
| Association with transcript: | 0bp_to_ENSMUST00000142776, NM_019987, uc009qtu.2, uc009qtv.2_5end |
| EntrezGene: | Ick |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.15e-08 | 23 |
| neuroblast (sensu Vertebrata) | 1.15e-08 | 23 |
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 2.66e-08 | 64 |
| neural plate | 2.66e-08 | 64 |
| presumptive neural plate | 2.66e-08 | 64 |
| ecto-epithelium | 1.66e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
