FFCP PHASE1:Mm9::chr8:5085929..5085963,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=131|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:5085929..5085963,-|id=chr8:5085929..5085963,-|ontology_enrichment_celltype=CL:0000473!3.56e-10!3;CL:0000627!3.56e-10!3;CL:0000682!3.56e-10!3;CL:0000066!5.37e-07!25|ontology_enrichment_celltype_v019_2=CL:0000182,9.38e-14,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000331!3.14e-11!3;UBERON:0002116!3.14e-11!3;UBERON:0001204!3.14e-11!3;UBERON:0001168!3.14e-11!3;UBERON:0000344!6.78e-10!15;UBERON:0000160!3.33e-08!43;UBERON:0001962!1.56e-07!2;UBERON:0001961!1.56e-07!2;UBERON:0001744!1.56e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.25e-30,4;UBERON:0000331,1.42e-23,3;UBERON:0002116,1.42e-23,3;UBERON:0001204,1.42e-23,3;UBERON:0001168,1.42e-23,3;UBERON:0003199,1.05e-08,1;UBERON:0000344,2.16e-08,15|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,1.37645568640302,1.14846392823004,0.430761996159075,0.646413698057667,17.1021077510736,5.04060259519861,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0798280022465,1.07940638327563,1.29955283489534,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,1.08069024937347,0.398282546508734,0,0,0,0,0.193952487167626,0.210407459670956,0,0.147610147979602,1.255989822731,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55537967950151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:5085929..5085963,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:5085929..5085963,- | |||
|id=chr8:5085929..5085963,- | |||
|ontology_enrichment_celltype=CL:0000473!3.56e-10!3;CL:0000627!3.56e-10!3;CL:0000682!3.56e-10!3;CL:0000066!5.37e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.38e-14,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000331!3.14e-11!3;UBERON:0002116!3.14e-11!3;UBERON:0001204!3.14e-11!3;UBERON:0001168!3.14e-11!3;UBERON:0000344!6.78e-10!15;UBERON:0000160!3.33e-08!43;UBERON:0001962!1.56e-07!2;UBERON:0001961!1.56e-07!2;UBERON:0001744!1.56e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.25e-30,4;UBERON:0000331,1.42e-23,3;UBERON:0002116,1.42e-23,3;UBERON:0001204,1.42e-23,3;UBERON:0001168,1.42e-23,3;UBERON:0003199,1.05e-08,1;UBERON:0000344,2.16e-08,15 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,1.37645568640302,1.14846392823004,0.430761996159075,0.646413698057667,17.1021077510736,5.04060259519861,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0798280022465,1.07940638327563,1.29955283489534,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,1.08069024937347,0.398282546508734,0,0,0,0,0.193952487167626,0.210407459670956,0,0.147610147979602,1.255989822731,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55537967950151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:5085929..5085963,- | |||
}} |
Revision as of 15:46, 14 September 2013
Short description: | p@chr8:5085929..5085963, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:5085929..5085963, - |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.38e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.25e-30 | 4 |
ileal mucosa | 1.42e-23 | 3 |
ileum | 1.42e-23 | 3 |
mucosa of small intestine | 1.42e-23 | 3 |
wall of small intestine | 1.42e-23 | 3 |
egg chamber | 1.05e-08 | 1 |
mucosa | 2.16e-08 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.