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FFCP PHASE1:Mm9::chr10:88996295..88996335,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20186|HGNC=|MCL_coexpression_id=8|UniProt=D3YTT2|association_with_transcript=0bp_to_ENSMUST00000105297_5end|description=CAGE_peak_3_at_Nr1h4_5end|id=chr10:88996295..88996335,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!5.29e-16!23;UBERON:0009856!5.29e-16!23;UBERON:0003914!5.67e-16!47;UBERON:0002107!9.16e-16!22;UBERON:0007499!9.16e-16!22;UBERON:0006925!9.16e-16!22;UBERON:0009497!9.16e-16!22;UBERON:0000015!9.16e-16!22;UBERON:0002423!9.16e-16!22;UBERON:0006235!9.16e-16!22;UBERON:0008835!9.16e-16!22;UBERON:0003894!9.16e-16!22;UBERON:0004161!9.16e-16!22;UBERON:0008836!9.16e-16!22;UBERON:0005256!1.85e-14!47;UBERON:0002365!3.34e-12!25;UBERON:0002330!3.34e-12!25;UBERON:0005172!7.90e-12!49;UBERON:0005173!7.90e-12!49;UBERON:0002417!7.90e-12!49;UBERON:0000916!7.90e-12!49;UBERON:0002368!3.93e-07!60;UBERON:0009569!6.94e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.64e-21,23;UBERON:0009856,3.64e-21,23;UBERON:0002107,7.68e-21,22;UBERON:0007499,7.68e-21,22;UBERON:0006925,7.68e-21,22;UBERON:0009497,7.68e-21,22;UBERON:0000015,7.68e-21,22;UBERON:0002423,7.68e-21,22;UBERON:0006235,7.68e-21,22;UBERON:0008835,7.68e-21,22;UBERON:0003894,7.68e-21,22;UBERON:0004161,7.68e-21,22;UBERON:0008836,7.68e-21,22;UBERON:0005256,8.05e-18,45;UBERON:0002365,3.52e-17,25;UBERON:0002330,3.52e-17,25;UBERON:0005172,2.11e-16,49;UBERON:0005173,2.11e-16,49;UBERON:0002417,2.11e-16,49;UBERON:0000916,2.11e-16,49;UBERON:0003104,9.41e-14,61;UBERON:0009142,9.41e-14,61;UBERON:0003914,3.45e-13,47;UBERON:0009569,6.31e-09,66;UBERON:0002368,3.01e-08,60;UBERON:0002369,4.34e-07,7;UBERON:0006858,4.34e-07,7;UBERON:0005177,5.13e-07,79;UBERON:0002530,7.84e-07,65;UBERON:0000160,9.61e-07,31|phase1_expression=0.640595388419176,1.04692622291808,1.81999695755814,0.90739263392049,2.00358291978539,0,0.467225281191051,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,1.60586496747019,1.14846392823004,2.15380998079537,1.939241094173,20.1424824623756,3.52842181663903,4.8780712344167,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,0,0,0,0.659058548203415,0.194429899074283,1.25987779462826,0,0,0,0,11.3194151855817,10.601737277734,5.67239301505187,0,0,0,0,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,3.02904773332736,3.09843396437821,15.3628179011889,40.4399222181252,15.6393406752783,28.6042691568043,55.2309954830519,67.6520599516977,11.7973312910672,0,0,0,0.281686839553361,0,2.54805239706646,0,0,0,0,14.1588010851634,0.776813650941515,10.984718290797,3.12273588179045,11.2652226975492,10.3776973765226,17.4838263041042,17.8734834846271,16.8393232381765,1.48316980640624,0.722996784599558,0,0,0.220841518460394,0.969750506270444,1.86391761218122,0.292780797011547,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,1.24406970610093,0,1.05220927943237,0,0,0.180062129805349,0.150704817835715,0.612328492361951,0.384341160854549,0.374806898238915,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,1.24275463521301,0.938104239924385,1.44049649168812,0.946978942340841,2.36117078096885,0.617068451549513,1.39520366850245,2.95100741539581,2.10177616260905,0.658239399653922,0.656669856316381,0.891756905004413,0.730999937126662,0.878200461164203,0.402619256281115,0.210289948564127,0.823236899034275,1.32167513193519,0.528901133327089,0.213288250535234,0,0.515469845288373,1.00841762311671,2.89091456998331,3.61428689613862,5.69434873853414,3.45867804920423,3.2673577144035,5.76973768919337,4.28920991662064,8.08937467788799,5.61958929674205,7.56736838366595,0,0.799739588268102,0,0,0.775809948670503,1.19230893813542,5.56481526693464,2.36176236767363,1.56998727841375,1.35736880313981,103.461966853415,3.17005700860579,3.73462090715086,3.14806957338795,5.07150303471257,7.47649195232492,10.9489116266011,18.4125527968519,14.9164408633033,30.476316863877,71.8841032636773,50.983309830585,65.8399490271723,66.9334026559846,65.6594533490199,50.6565697431536,0.369506380333209,0,0.162964976442026,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,6.67118400478862,0,0.162886959353576,0.329940245945071,0,0.728341908464944,0.906970670894253,0.943025398779491,0.590603785761546,0,1.29214146584111,1.45413491791002,1.42598951353889,0.632073515871632,0,0,1.02131881726136,0,0,0,0.177340233642274,0.178368817602071,0.822745103010605,0.608929898229199,0,0,0.220528398054962,1.31909002353184,0,0,0,0,7.28702091574627,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0.954670618015114,0,1.01659733563424,0.216010681643603,0.627264888043406,0.436725127492355,1.07891477107857,5.2898211664215,0.785267825952089,4.27729411862916,0,0,0.897099276263873,0.330916980914195,0,0.129159823477731,0.168956125490778,0.352071715937262,0.5208175393758,0.104859344425711,0,0.864090018773596,0.316011120628178,0.405450430580328,0.616265742988964,0.389762468933385,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.965947970160952,1.31377732815827,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.512200817262403,0.972426868273176,1.46729213839588,0.551530525350042,3.55594764482584,2.26638562962784,1.28367683836726,1.26348605881899,1.2673964994512,1.69763707247469,1.40462261204824,1.98477972455095,1.37845125493472,1.42888107384922,1.15884325944855,1.54327376370964,2.47251540481984,2.06078488188156,2.40008476669791,2.30718548007139,2.14592570952589,2.61623549938191,2.25862512996793,1.69229215783353,3.10977553883713,1.57841826862706,1.35804113845862,0,2.84724043498018,1.57607171800902,0.818462086339379,1.70430525304563,1.54325288784913,0,2.33931608445408,2.57845264857958,0.191288332068843,0.441182838239031,0|short_description=p3@Nr1h4}}
|EntrezGene=20186
|HGNC=
|MCL_coexpression_id=8
|UniProt=D3YTT2
|association_with_transcript=0bp_to_ENSMUST00000105297_5end
|description=CAGE_peak_3_at_Nr1h4_5end
|id=chr10:88996295..88996335,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!5.29e-16!23;UBERON:0009856!5.29e-16!23;UBERON:0003914!5.67e-16!47;UBERON:0002107!9.16e-16!22;UBERON:0007499!9.16e-16!22;UBERON:0006925!9.16e-16!22;UBERON:0009497!9.16e-16!22;UBERON:0000015!9.16e-16!22;UBERON:0002423!9.16e-16!22;UBERON:0006235!9.16e-16!22;UBERON:0008835!9.16e-16!22;UBERON:0003894!9.16e-16!22;UBERON:0004161!9.16e-16!22;UBERON:0008836!9.16e-16!22;UBERON:0005256!1.85e-14!47;UBERON:0002365!3.34e-12!25;UBERON:0002330!3.34e-12!25;UBERON:0005172!7.90e-12!49;UBERON:0005173!7.90e-12!49;UBERON:0002417!7.90e-12!49;UBERON:0000916!7.90e-12!49;UBERON:0002368!3.93e-07!60;UBERON:0009569!6.94e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.64e-21,23;UBERON:0009856,3.64e-21,23;UBERON:0002107,7.68e-21,22;UBERON:0007499,7.68e-21,22;UBERON:0006925,7.68e-21,22;UBERON:0009497,7.68e-21,22;UBERON:0000015,7.68e-21,22;UBERON:0002423,7.68e-21,22;UBERON:0006235,7.68e-21,22;UBERON:0008835,7.68e-21,22;UBERON:0003894,7.68e-21,22;UBERON:0004161,7.68e-21,22;UBERON:0008836,7.68e-21,22;UBERON:0005256,8.05e-18,45;UBERON:0002365,3.52e-17,25;UBERON:0002330,3.52e-17,25;UBERON:0005172,2.11e-16,49;UBERON:0005173,2.11e-16,49;UBERON:0002417,2.11e-16,49;UBERON:0000916,2.11e-16,49;UBERON:0003104,9.41e-14,61;UBERON:0009142,9.41e-14,61;UBERON:0003914,3.45e-13,47;UBERON:0009569,6.31e-09,66;UBERON:0002368,3.01e-08,60;UBERON:0002369,4.34e-07,7;UBERON:0006858,4.34e-07,7;UBERON:0005177,5.13e-07,79;UBERON:0002530,7.84e-07,65;UBERON:0000160,9.61e-07,31
|phase1_expression=0.640595388419176,1.04692622291808,1.81999695755814,0.90739263392049,2.00358291978539,0,0.467225281191051,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,1.60586496747019,1.14846392823004,2.15380998079537,1.939241094173,20.1424824623756,3.52842181663903,4.8780712344167,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,0,0,0,0.659058548203415,0.194429899074283,1.25987779462826,0,0,0,0,11.3194151855817,10.601737277734,5.67239301505187,0,0,0,0,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,3.02904773332736,3.09843396437821,15.3628179011889,40.4399222181252,15.6393406752783,28.6042691568043,55.2309954830519,67.6520599516977,11.7973312910672,0,0,0,0.281686839553361,0,2.54805239706646,0,0,0,0,14.1588010851634,0.776813650941515,10.984718290797,3.12273588179045,11.2652226975492,10.3776973765226,17.4838263041042,17.8734834846271,16.8393232381765,1.48316980640624,0.722996784599558,0,0,0.220841518460394,0.969750506270444,1.86391761218122,0.292780797011547,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,1.24406970610093,0,1.05220927943237,0,0,0.180062129805349,0.150704817835715,0.612328492361951,0.384341160854549,0.374806898238915,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,1.24275463521301,0.938104239924385,1.44049649168812,0.946978942340841,2.36117078096885,0.617068451549513,1.39520366850245,2.95100741539581,2.10177616260905,0.658239399653922,0.656669856316381,0.891756905004413,0.730999937126662,0.878200461164203,0.402619256281115,0.210289948564127,0.823236899034275,1.32167513193519,0.528901133327089,0.213288250535234,0,0.515469845288373,1.00841762311671,2.89091456998331,3.61428689613862,5.69434873853414,3.45867804920423,3.2673577144035,5.76973768919337,4.28920991662064,8.08937467788799,5.61958929674205,7.56736838366595,0,0.799739588268102,0,0,0.775809948670503,1.19230893813542,5.56481526693464,2.36176236767363,1.56998727841375,1.35736880313981,103.461966853415,3.17005700860579,3.73462090715086,3.14806957338795,5.07150303471257,7.47649195232492,10.9489116266011,18.4125527968519,14.9164408633033,30.476316863877,71.8841032636773,50.983309830585,65.8399490271723,66.9334026559846,65.6594533490199,50.6565697431536,0.369506380333209,0,0.162964976442026,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,6.67118400478862,0,0.162886959353576,0.329940245945071,0,0.728341908464944,0.906970670894253,0.943025398779491,0.590603785761546,0,1.29214146584111,1.45413491791002,1.42598951353889,0.632073515871632,0,0,1.02131881726136,0,0,0,0.177340233642274,0.178368817602071,0.822745103010605,0.608929898229199,0,0,0.220528398054962,1.31909002353184,0,0,0,0,7.28702091574627,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0.954670618015114,0,1.01659733563424,0.216010681643603,0.627264888043406,0.436725127492355,1.07891477107857,5.2898211664215,0.785267825952089,4.27729411862916,0,0,0.897099276263873,0.330916980914195,0,0.129159823477731,0.168956125490778,0.352071715937262,0.5208175393758,0.104859344425711,0,0.864090018773596,0.316011120628178,0.405450430580328,0.616265742988964,0.389762468933385,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.965947970160952,1.31377732815827,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.512200817262403,0.972426868273176,1.46729213839588,0.551530525350042,3.55594764482584,2.26638562962784,1.28367683836726,1.26348605881899,1.2673964994512,1.69763707247469,1.40462261204824,1.98477972455095,1.37845125493472,1.42888107384922,1.15884325944855,1.54327376370964,2.47251540481984,2.06078488188156,2.40008476669791,2.30718548007139,2.14592570952589,2.61623549938191,2.25862512996793,1.69229215783353,3.10977553883713,1.57841826862706,1.35804113845862,0,2.84724043498018,1.57607171800902,0.818462086339379,1.70430525304563,1.54325288784913,0,2.33931608445408,2.57845264857958,0.191288332068843,0.441182838239031,0
|short_description=p3@Nr1h4
}}

Revision as of 17:55, 12 September 2013

Short description:p3@Nr1h4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nr1h4_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000105297_5end
EntrezGene:Nr1h4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nr1h4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B920.14
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D93.03
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F740.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C828.60
Mouse hepatocyte, donor6.CNhs13090.11822-124F455.23
Mouse hepatocyte, donor8.CNhs13091.11824-124F667.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.16
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D710.98
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D611.27
adrenal gland, embryo E17.CNhs11043.1263-45I110.38
adrenal gland, embryo E18.CNhs11026.1262-18F517.48
adrenal gland, neonate N00.CNhs11191.1311-23C117.87
adrenal gland, neonate N25.CNhs11223.1377-27I316.84
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G17.57
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D55.56
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B2103.46
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F57.48
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G418.41
liver, neonate N00.CNhs11117.641-24F414.92
liver, neonate N03.CNhs11123.1345-25G230.48
liver, neonate N06.CNhs11101.684-20A871.88
liver, neonate N07.CNhs11103.716-20H250.98
liver, neonate N10.CNhs11115.751-24B965.84
liver, neonate N20.CNhs11220.823-25A366.93
liver, neonate N25.CNhs11198.1368-26H165.66
liver, neonate N30.CNhs11106.1382-42D150.66
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I76.67
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A95.29
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I14.28
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum3.64e-2123
sac3.64e-2123
liver7.68e-2122
epithelial sac7.68e-2122
digestive gland7.68e-2122
epithelium of foregut-midgut junction7.68e-2122
anatomical boundary7.68e-2122
hepatobiliary system7.68e-2122
foregut-midgut junction7.68e-2122
hepatic diverticulum7.68e-2122
liver primordium7.68e-2122
septum transversum7.68e-2122
liver bud7.68e-2122
trunk mesenchyme8.05e-1845
exocrine gland3.52e-1725
exocrine system3.52e-1725
abdomen element2.11e-1649
abdominal segment element2.11e-1649
abdominal segment of trunk2.11e-1649
abdomen2.11e-1649
mesenchyme9.41e-1461
entire embryonic mesenchyme9.41e-1461
epithelial tube3.45e-1347
subdivision of trunk6.31e-0966
endocrine gland3.01e-0860
adrenal gland4.34e-077
adrenal/interrenal gland4.34e-077
trunk region element5.13e-0779
gland7.84e-0765
intestine9.61e-0731







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