FFCP PHASE1:Mm9::chr1:72898728..72898736,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=336|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:72898728..72898736,+|id=chr1:72898728..72898736,+|ontology_enrichment_celltype=CL:0000128!2.55e-18!6;CL:0000126!2.55e-18!6;CL:0000127!2.55e-18!6;CL:0002453!4.47e-18!8;CL:0000333!3.05e-14!10;CL:0000095!3.05e-14!10;CL:0000243!3.05e-14!10;CL:0000123!3.05e-14!10;CL:0000125!3.05e-14!10;CL:0000030!3.05e-14!10;CL:0000339!3.05e-14!10;CL:0002604!2.29e-07!2;CL:0002605!2.29e-07!2;CL:0002603!4.50e-07!2|ontology_enrichment_celltype_v019_2=CL:0000128,2.34e-60,6;CL:0000126,2.34e-60,6;CL:0000127,2.34e-60,6;CL:0002453,1.81e-45,8;CL:0000333,1.59e-36,10;CL:0000095,1.59e-36,10;CL:0000243,1.59e-36,10;CL:0000123,1.59e-36,10;CL:0000125,1.59e-36,10;CL:0000030,1.59e-36,10;CL:0000339,1.59e-36,10;CL:0002605,1.73e-30,2;CL:0002604,1.73e-30,2;CL:0002319,6.89e-09,43;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0002603,1.53e-08,2;CL:0000219,3.79e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.78e-09,7;UBERON:0003022,1.78e-09,7;UBERON:0002421,1.78e-09,7;UBERON:0000349,1.78e-09,7;UBERON:0002600,1.78e-09,7|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.70642765846759,5.71184075109627,10.304784650937,1.1198913730029,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486405680325106,0,4.31304619582064,0,0.936113019343682,0,0,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:72898728..72898736,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=336 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:72898728..72898736,+ | |||
|id=chr1:72898728..72898736,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.55e-18!6;CL:0000126!2.55e-18!6;CL:0000127!2.55e-18!6;CL:0002453!4.47e-18!8;CL:0000333!3.05e-14!10;CL:0000095!3.05e-14!10;CL:0000243!3.05e-14!10;CL:0000123!3.05e-14!10;CL:0000125!3.05e-14!10;CL:0000030!3.05e-14!10;CL:0000339!3.05e-14!10;CL:0002604!2.29e-07!2;CL:0002605!2.29e-07!2;CL:0002603!4.50e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.34e-60,6;CL:0000126,2.34e-60,6;CL:0000127,2.34e-60,6;CL:0002453,1.81e-45,8;CL:0000333,1.59e-36,10;CL:0000095,1.59e-36,10;CL:0000243,1.59e-36,10;CL:0000123,1.59e-36,10;CL:0000125,1.59e-36,10;CL:0000030,1.59e-36,10;CL:0000339,1.59e-36,10;CL:0002605,1.73e-30,2;CL:0002604,1.73e-30,2;CL:0002319,6.89e-09,43;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0002603,1.53e-08,2;CL:0000219,3.79e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.78e-09,7;UBERON:0003022,1.78e-09,7;UBERON:0002421,1.78e-09,7;UBERON:0000349,1.78e-09,7;UBERON:0002600,1.78e-09,7 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.70642765846759,5.71184075109627,10.304784650937,1.1198913730029,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486405680325106,0,4.31304619582064,0,0.936113019343682,0,0,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:72898728..72898736,+ | |||
}} |
Revision as of 20:52, 13 September 2013
Short description: | p@chr1:72898728..72898736, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72898728..72898736, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.34e-60 | 6 |
macroglial cell | 2.34e-60 | 6 |
astrocyte | 2.34e-60 | 6 |
oligodendrocyte precursor cell | 1.81e-45 | 8 |
migratory neural crest cell | 1.59e-36 | 10 |
neuron associated cell | 1.59e-36 | 10 |
glial cell (sensu Vertebrata) | 1.59e-36 | 10 |
neuron associated cell (sensu Vertebrata) | 1.59e-36 | 10 |
glial cell | 1.59e-36 | 10 |
glioblast | 1.59e-36 | 10 |
glioblast (sensu Vertebrata) | 1.59e-36 | 10 |
astrocyte of the cerebral cortex | 1.73e-30 | 2 |
astrocyte of the hippocampus | 1.73e-30 | 2 |
neural cell | 6.89e-09 | 43 |
ectodermal cell | 1.08e-08 | 44 |
neurectodermal cell | 1.08e-08 | 44 |
astrocyte of the cerebellum | 1.53e-08 | 2 |
motile cell | 3.79e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.78e-09 | 7 |
lobe parts of cerebral cortex | 1.78e-09 | 7 |
hippocampal formation | 1.78e-09 | 7 |
limbic system | 1.78e-09 | 7 |
limbic lobe | 1.78e-09 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.