FFCP PHASE1:Mm9::chr12:114498371..114498382,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=569|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114498371..114498382,+|id=chr12:114498371..114498382,+|ontology_enrichment_celltype=CL:0000553!1.42e-19!6;CL:0000556!1.42e-19!6;CL:0002027!6.38e-15!3;CL:0002006!6.38e-15!3;CL:0002024!6.38e-15!3;CL:0000050!5.11e-13!9;CL:0000414!1.26e-10!11;CL:0000839!5.76e-09!13;CL:0000763!3.00e-07!16|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000331!1.22e-14!3;UBERON:0002116!1.22e-14!3;UBERON:0001204!1.22e-14!3;UBERON:0001168!1.22e-14!3;UBERON:0000344!3.79e-11!15;UBERON:0001962!4.26e-11!2;UBERON:0001961!4.26e-11!2;UBERON:0001744!4.26e-11!2;UBERON:0004923!3.95e-09!24;UBERON:0002465!1.14e-07!3;UBERON:0002371!3.00e-07!16;UBERON:0002193!8.31e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0001962,4.55e-44,2;UBERON:0001961,4.55e-44,2;UBERON:0001744,4.55e-44,2;UBERON:0002465,7.89e-30,3;UBERON:0003199,5.07e-23,1;UBERON:0001155,2.42e-12,2;UBERON:0000059,2.42e-12,2;UBERON:0007023,1.20e-07,51;UBERON:0000344,7.74e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0.548457734422955,0,0.0850432901510698,0,0,2.55987876469451,4.12936705920906,0,0,0,0.950117097281869,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7946809812639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.05780226665418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:114498371..114498382,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=569 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114498371..114498382,+ | |||
|id=chr12:114498371..114498382,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.42e-19!6;CL:0000556!1.42e-19!6;CL:0002027!6.38e-15!3;CL:0002006!6.38e-15!3;CL:0002024!6.38e-15!3;CL:0000050!5.11e-13!9;CL:0000414!1.26e-10!11;CL:0000839!5.76e-09!13;CL:0000763!3.00e-07!16 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000331!1.22e-14!3;UBERON:0002116!1.22e-14!3;UBERON:0001204!1.22e-14!3;UBERON:0001168!1.22e-14!3;UBERON:0000344!3.79e-11!15;UBERON:0001962!4.26e-11!2;UBERON:0001961!4.26e-11!2;UBERON:0001744!4.26e-11!2;UBERON:0004923!3.95e-09!24;UBERON:0002465!1.14e-07!3;UBERON:0002371!3.00e-07!16;UBERON:0002193!8.31e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,4.55e-44,2;UBERON:0001961,4.55e-44,2;UBERON:0001744,4.55e-44,2;UBERON:0002465,7.89e-30,3;UBERON:0003199,5.07e-23,1;UBERON:0001155,2.42e-12,2;UBERON:0000059,2.42e-12,2;UBERON:0007023,1.20e-07,51;UBERON:0000344,7.74e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0.548457734422955,0,0.0850432901510698,0,0,2.55987876469451,4.12936705920906,0,0,0,0.950117097281869,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7946809812639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.05780226665418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:114498371..114498382,+ | |||
}} |
Revision as of 22:25, 12 September 2013
Short description: | p@chr12:114498371..114498382, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114498371..114498382, + |
Coexpression cluster: | MCL_coexpression_mm9:569 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 4.55e-44 | 2 |
mucosa-associated lymphoid tissue | 4.55e-44 | 2 |
lymphoid tissue | 4.55e-44 | 2 |
lymphoid system | 7.89e-30 | 3 |
egg chamber | 5.07e-23 | 1 |
colon | 2.42e-12 | 2 |
large intestine | 2.42e-12 | 2 |
adult organism | 1.20e-07 | 51 |
mucosa | 7.74e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.