FFCP PHASE1:Mm9::chr2:32502124..32502129,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=13805|HGNC=|UniProt=Q63961,E9Q5I7,Q3UAM9|association_with_transcript=9bp_to_ENSMUST00000009705,ENSMUST00000167841,NM_001146348,NM_001146350,NM_007932,uc008jgk.2,uc008jgl.2,uc012btx.1_5end|description=CAGE_peak_4_at_Eng_5end|id=chr2:32502124..32502129,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!6.50e-09!193;UBERON:0004120!6.50e-09!193;UBERON:0006603!6.50e-09!193;UBERON:0004872!5.47e-08!33|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.50e-09,33;UBERON:0002048,3.15e-07,14;UBERON:0000117,3.15e-07,14;UBERON:0000171,3.15e-07,14;UBERON:0000170,3.15e-07,14;UBERON:0005597,3.15e-07,14;UBERON:0000118,3.15e-07,14;UBERON:0005153,9.33e-07,17|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,1.99865857089398,1.21485160433896,1.39912375625629,0,0.274228867211478,0.42438965179803,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.125896817975577,0,0.183546752161682,11.7358701652206,0,0.219686182734472,0.777719596297134,1.25987779462826,0,0,0,1.34437519656986,12.0911934936895,16.0458726365704,8.25075347643908,0,1.05798195854407,1.26766280701236,2.37191172448392,0.889294796111139,5.39939830368839,8.89979726310277,8.5257613793532,1.49800055259202,3.07374644257244,0.311068836925433,0.270011876663381,0.210324961351382,0.856952953211411,0.441737081903227,0.244981598429908,0.287536413054709,0,0,0.127687338085188,0,0.131886287730194,0.274462930807229,0,0.558365998002762,1.12552522006336,0,0.294628585473668,0.569486723196412,0.372798891650601,0.151452386666368,0.68014404096107,4.05810284182349,2.58127163094416,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,1.29468941823586,0.742210695324124,0.867426633830679,3.04465478312141,1.15307748628029,1.3565037649736,1.29347577849275,1.38233250462643,2.71914464507811,3.03658649531814,0.884610551949874,2.91180329905337,0.883366073841574,0.484875253135222,0,0.585561594023094,0.209446706813455,0.255457055208591,1.31796636956512,0.599902730993408,1.52484272487678,0.149790639404823,0.457500602818626,0.251308704225729,0,0.511430914660661,0,0.486723789203273,2.95334155165917,1.8661045591514,0,0.210441855886474,0,0,0.360124259610698,0.753524089178575,0.884474488967262,0.640568601424249,0.562210347358373,1.29351685369508,0.215567992932842,0.189106080167819,0.527853372491847,1.53437012699302,1.11218899690239,2.78601733217733,2.46938563689532,1.39323986772945,0,0.51469581422943,1.13665399758237,0.621377317606506,0.703578179943289,1.44049649168812,1.18372367792605,1.18058539048442,0.617068451549513,1.86027155800326,2.68273401399619,2.80236821681207,3.45575684818309,1.31333971263276,1.86458261955468,2.33919979880532,1.75640092232841,2.28150911892632,0.420579897128254,0.102904612379284,0,0,0.639864751605702,0.464473343720877,1.03093969057675,0.403367049246685,1.11189021922435,1.52180500890047,0.474529061544512,1.31759163779209,0.754005626400808,0.994782360205754,0.19496408711912,0,0.864552199498777,0.597423819763102,0.189667900953082,0.456994050438915,2.25415471346161,0.610953983535943,0.387904974335251,1.54298803758701,1.51767689098217,1.18088118383682,1.72698600625512,1.48076596706161,0,0.333690211432188,0.589676985339609,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,1.15078454980324,1.13494658742525,0.823684239564244,0,1.86070473834252,1.24815069245824,0.757736633841335,0.717589654087649,0.482443521363367,2.77129785249907,0.757965647081939,1.79261474086228,2.37643120085263,1.64283173801951,2.34508760418542,1.90434912708811,1.36593553500459,4.57141917907954,3.10050565508285,5.89982644032702,2.94953966488328,3.10832967358612,1.73578870297814,7.53956419696361,11.9659250440116,1.47529281905711,1.37968373152366,0.160550589987792,0.117211686592203,0,1.00988370881749,0.315508219416257,0.780877488593277,0.215423397732799,0.716906393857656,0.891194696329576,0.283076530788832,1.61924280669958,1.46127928955656,0.790575555893047,0,0.99358059645788,3.38324646967785,3.4206261464251,1.64970122972535,0,0.485561272309963,0.302323556964751,0.754420319023592,0.885905678642318,1.84461088766356,1.55056975900933,2.90826983582004,1.42598951353889,0.316036757935816,1.05418608574999,0,0,0.540183282093931,0.646793418913773,0.428674070063185,0.886701168211368,1.60531935841864,0.987294123612726,1.522324745573,1.17335854031855,1.48282449604674,0.661585194164886,0.98931751764888,1.93757312035087,1.44751019827574,1.67121281604391,0.656563598980245,0.874442509889552,0.370850604021019,1.87957968877638,2.68302928352189,2.59272338317596,1.88368457004691,2.1871076435364,1.60144721244566,2.54967644990783,1.39951452323658,2.48759952847963,1.90934123603023,0,0.609958401380546,0.756037385752609,1.25452977608681,1.74690050996942,1.61837215661785,1.73572257023205,1.04702376793612,0.648074866458964,0.621339313086926,0,0.299033092087958,1.32366792365678,1.94451188344048,2.58319646955462,1.68956125490778,2.8165737274981,1.5624526181274,1.36317147753424,0.483168241652012,0,0,0.608175645870493,1.02710957164827,0.51968329191118,0.895133478337407,0.39736270956253,0.721172697119813,0.738447635872886,1.00966449948148,0.609654453239999,0.201652370273681,0.487289403698762,0.384847366561318,0.818138315270983,1.36038230169127,1.33191572024439,0.986852422704233,2.3503846290971,0.772758376128762,5.06742683718191,1.64836461840539,1.07184189539533,1.00314420807073,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0.628839487883947,2.20612210140017,1.77797382241292,2.26638562962784,1.92551525755089,2.02157769411038,1.01391719956096,0.943131706930381,1.68554713445788,1.15245274328765,1.49332219284595,2.85776214769844,1.62238056322798,0.964546102318525,1.23625770240992,0.588795680537589,1.37147700954166,0.887379030796687,0.953744759789284,1.59881058295561,1.03520318456864,1.86152137361688,1.64635175585495,0.526139422875686,1.35804113845862,0.561142271657738,0.949080144993393,1.28055827088233,2.45538625901814,2.78886314134739,1.73615949883027,1.24905288968973,1.40358965067245,3.22306581072447,3.25190164517034,1.10295709559758,1.39120701372253|short_description=p4@Eng}} | ||
|EntrezGene=13805 | |||
|HGNC= | |||
|UniProt=Q63961,E9Q5I7,Q3UAM9 | |||
|association_with_transcript=9bp_to_ENSMUST00000009705,ENSMUST00000167841,NM_001146348,NM_001146350,NM_007932,uc008jgk.2,uc008jgl.2,uc012btx.1_5end | |||
|description=CAGE_peak_4_at_Eng_5end | |||
|id=chr2:32502124..32502129,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.50e-09!193;UBERON:0004120!6.50e-09!193;UBERON:0006603!6.50e-09!193;UBERON:0004872!5.47e-08!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.50e-09,33;UBERON:0002048,3.15e-07,14;UBERON:0000117,3.15e-07,14;UBERON:0000171,3.15e-07,14;UBERON:0000170,3.15e-07,14;UBERON:0005597,3.15e-07,14;UBERON:0000118,3.15e-07,14;UBERON:0005153,9.33e-07,17 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,1.99865857089398,1.21485160433896,1.39912375625629,0,0.274228867211478,0.42438965179803,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.125896817975577,0,0.183546752161682,11.7358701652206,0,0.219686182734472,0.777719596297134,1.25987779462826,0,0,0,1.34437519656986,12.0911934936895,16.0458726365704,8.25075347643908,0,1.05798195854407,1.26766280701236,2.37191172448392,0.889294796111139,5.39939830368839,8.89979726310277,8.5257613793532,1.49800055259202,3.07374644257244,0.311068836925433,0.270011876663381,0.210324961351382,0.856952953211411,0.441737081903227,0.244981598429908,0.287536413054709,0,0,0.127687338085188,0,0.131886287730194,0.274462930807229,0,0.558365998002762,1.12552522006336,0,0.294628585473668,0.569486723196412,0.372798891650601,0.151452386666368,0.68014404096107,4.05810284182349,2.58127163094416,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,1.29468941823586,0.742210695324124,0.867426633830679,3.04465478312141,1.15307748628029,1.3565037649736,1.29347577849275,1.38233250462643,2.71914464507811,3.03658649531814,0.884610551949874,2.91180329905337,0.883366073841574,0.484875253135222,0,0.585561594023094,0.209446706813455,0.255457055208591,1.31796636956512,0.599902730993408,1.52484272487678,0.149790639404823,0.457500602818626,0.251308704225729,0,0.511430914660661,0,0.486723789203273,2.95334155165917,1.8661045591514,0,0.210441855886474,0,0,0.360124259610698,0.753524089178575,0.884474488967262,0.640568601424249,0.562210347358373,1.29351685369508,0.215567992932842,0.189106080167819,0.527853372491847,1.53437012699302,1.11218899690239,2.78601733217733,2.46938563689532,1.39323986772945,0,0.51469581422943,1.13665399758237,0.621377317606506,0.703578179943289,1.44049649168812,1.18372367792605,1.18058539048442,0.617068451549513,1.86027155800326,2.68273401399619,2.80236821681207,3.45575684818309,1.31333971263276,1.86458261955468,2.33919979880532,1.75640092232841,2.28150911892632,0.420579897128254,0.102904612379284,0,0,0.639864751605702,0.464473343720877,1.03093969057675,0.403367049246685,1.11189021922435,1.52180500890047,0.474529061544512,1.31759163779209,0.754005626400808,0.994782360205754,0.19496408711912,0,0.864552199498777,0.597423819763102,0.189667900953082,0.456994050438915,2.25415471346161,0.610953983535943,0.387904974335251,1.54298803758701,1.51767689098217,1.18088118383682,1.72698600625512,1.48076596706161,0,0.333690211432188,0.589676985339609,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,1.15078454980324,1.13494658742525,0.823684239564244,0,1.86070473834252,1.24815069245824,0.757736633841335,0.717589654087649,0.482443521363367,2.77129785249907,0.757965647081939,1.79261474086228,2.37643120085263,1.64283173801951,2.34508760418542,1.90434912708811,1.36593553500459,4.57141917907954,3.10050565508285,5.89982644032702,2.94953966488328,3.10832967358612,1.73578870297814,7.53956419696361,11.9659250440116,1.47529281905711,1.37968373152366,0.160550589987792,0.117211686592203,0,1.00988370881749,0.315508219416257,0.780877488593277,0.215423397732799,0.716906393857656,0.891194696329576,0.283076530788832,1.61924280669958,1.46127928955656,0.790575555893047,0,0.99358059645788,3.38324646967785,3.4206261464251,1.64970122972535,0,0.485561272309963,0.302323556964751,0.754420319023592,0.885905678642318,1.84461088766356,1.55056975900933,2.90826983582004,1.42598951353889,0.316036757935816,1.05418608574999,0,0,0.540183282093931,0.646793418913773,0.428674070063185,0.886701168211368,1.60531935841864,0.987294123612726,1.522324745573,1.17335854031855,1.48282449604674,0.661585194164886,0.98931751764888,1.93757312035087,1.44751019827574,1.67121281604391,0.656563598980245,0.874442509889552,0.370850604021019,1.87957968877638,2.68302928352189,2.59272338317596,1.88368457004691,2.1871076435364,1.60144721244566,2.54967644990783,1.39951452323658,2.48759952847963,1.90934123603023,0,0.609958401380546,0.756037385752609,1.25452977608681,1.74690050996942,1.61837215661785,1.73572257023205,1.04702376793612,0.648074866458964,0.621339313086926,0,0.299033092087958,1.32366792365678,1.94451188344048,2.58319646955462,1.68956125490778,2.8165737274981,1.5624526181274,1.36317147753424,0.483168241652012,0,0,0.608175645870493,1.02710957164827,0.51968329191118,0.895133478337407,0.39736270956253,0.721172697119813,0.738447635872886,1.00966449948148,0.609654453239999,0.201652370273681,0.487289403698762,0.384847366561318,0.818138315270983,1.36038230169127,1.33191572024439,0.986852422704233,2.3503846290971,0.772758376128762,5.06742683718191,1.64836461840539,1.07184189539533,1.00314420807073,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0.628839487883947,2.20612210140017,1.77797382241292,2.26638562962784,1.92551525755089,2.02157769411038,1.01391719956096,0.943131706930381,1.68554713445788,1.15245274328765,1.49332219284595,2.85776214769844,1.62238056322798,0.964546102318525,1.23625770240992,0.588795680537589,1.37147700954166,0.887379030796687,0.953744759789284,1.59881058295561,1.03520318456864,1.86152137361688,1.64635175585495,0.526139422875686,1.35804113845862,0.561142271657738,0.949080144993393,1.28055827088233,2.45538625901814,2.78886314134739,1.73615949883027,1.24905288968973,1.40358965067245,3.22306581072447,3.25190164517034,1.10295709559758,1.39120701372253 | |||
|short_description=p4@Eng | |||
}} |
Revision as of 23:49, 13 September 2013
Short description: | p4@Eng |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Eng_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENSMUST00000009705, ENSMUST00000167841, NM_001146348, NM_001146350, NM_007932, uc008jgk.2, uc008jgl.2, uc012btx.1_5end |
EntrezGene: | Eng |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 4.50e-09 | 33 |
lung | 3.15e-07 | 14 |
respiratory tube | 3.15e-07 | 14 |
respiration organ | 3.15e-07 | 14 |
pair of lungs | 3.15e-07 | 14 |
lung primordium | 3.15e-07 | 14 |
lung bud | 3.15e-07 | 14 |
epithelial bud | 9.33e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.