FFCP PHASE1:Mm9::chr11:72249038..72249060,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71522|HGNC=|MCL_coexpression_id=2710|UniProt=A7DTG9,Q7TNR0|association_with_transcript=2bp_to_ENSMUST00000108499,ENSMUST00000169015_5end|description=CAGE_peak_3_at_Ggt6_5end|id=chr11:72249038..72249060,+|ontology_enrichment_celltype=CL:0002563!1.96e-07!9;CL:0002251!1.96e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,6.29e-11,9;CL:0002251,6.29e-11,9;CL:0000066,7.91e-09,25;CL:0000239,5.92e-08,6;CL:0000677,5.92e-08,6;CL:0000584,5.92e-08,6;CL:0000223,1.06e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.49e-14!59;UBERON:0000160!1.80e-13!43;UBERON:0000344!1.40e-11!15;UBERON:0001007!9.21e-11!128;UBERON:0001555!9.21e-11!128;UBERON:0007026!9.21e-11!128;UBERON:0001242!2.35e-10!13;UBERON:0000060!2.35e-10!13;UBERON:0001262!2.35e-10!13;UBERON:0004786!2.35e-10!13;UBERON:0004119!3.06e-10!130;UBERON:0000925!3.06e-10!130;UBERON:0006595!3.06e-10!130;UBERON:0004921!7.09e-10!126;UBERON:0004185!7.09e-10!126;UBERON:0003350!1.96e-07!9;UBERON:0004808!1.96e-07!9;UBERON:0001277!1.96e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.89e-25,47;UBERON:0000160,1.94e-23,31;UBERON:0000344,1.58e-17,15;UBERON:0001242,1.41e-15,13;UBERON:0001262,1.41e-15,13;UBERON:0004786,1.41e-15,13;UBERON:0001007,4.39e-14,116;UBERON:0001555,4.39e-14,116;UBERON:0007026,4.39e-14,116;UBERON:0004119,1.29e-13,118;UBERON:0000925,1.29e-13,118;UBERON:0006595,1.29e-13,118;UBERON:0004921,9.34e-13,114;UBERON:0003350,6.29e-11,9;UBERON:0004808,6.29e-11,9;UBERON:0001277,6.29e-11,9;UBERON:0004923,2.67e-09,24;UBERON:0000485,1.54e-08,11;UBERON:0000014,4.94e-08,5;UBERON:0001003,4.94e-08,5;UBERON:0002097,4.94e-08,5;UBERON:0002199,4.94e-08,5;UBERON:0007029,4.94e-08,5;UBERON:0007376,4.94e-08,5;UBERON:0002416,4.94e-08,5;UBERON:0007383,4.94e-08,5|phase1_expression=0,5.93258192986914,4.09499315450582,7.25914107136392,5.50985302940982,3.69334398206158,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,4.15980299262857,3.67054849707472,2.29692785646008,3.87685796543167,3.44753972297422,11.4014051673824,7.81293402255785,9.3126814475228,0,0,0,4.33277429626912,3.65716219788683,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,8.60423876981386,0.679971333707751,12.9528765993076,16.8941868536394,14.7848872742121,2.94933282276679,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0,0,0,0,0,0,0.251333182659351,0,0.144599356919912,0.884610551949874,0,0,0,14.9113408974498,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.90422890701429,0,0,0.0937017245597288,0,0,0.189106080167819,0,1.09597866213787,3.61461423993277,9.05455632957633,12.1411460480687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,3.17340679996253,0,0,1.41754207454303,2.01683524623343,0.667134131534611,2.85338439168839,3.79623249235609,2.63518327558417,2.76468729680296,0.994782360205754,1.55971269695296,2.69645822596266,3.02593269824572,4.97853183135918,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.379419222745544,0.590440591918409,0.470996183524124,0.863780147452604,10.9687472022245,0,0,0,0,0,0.50925170356284,0.575392274901621,0.486405680325106,0,0,0,0.312037673114561,1.26289438973556,4.12614051100398,14.473305640901,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0.81931657357869,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,1.32745138339963,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,16.9832840529724,10.9795810153216,7.59942854094764,10.6241386162791,8.69946768648825,3.49777003955821,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0.406638934253697,2.48412283890143,4.39085421630384,6.11415178489297,6.60835297285622,3.71940550764012,4.97336289769656,7.12882353104861,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.596044064343795,0,0.147689527174577,0.201932899896295,0,0,0.38983152295901,0,0.116876902181569,12.6969014824518,0.221985953374065,0.0897138566094757,0,0.579568782096571,0.563047426353546,0.183151624267265,9.64657705855796,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0.628839487883947,1.2869045591501,1.55572709461131,0.824140228955577,0.962757628775446,0.758091635291392,1.52087579934144,0.754505365544305,0.936415074698824,0.576226371643824,0.402048282689293,0.952587382566147,0.347652977834566,0.38581844092741,0,0.441596760403192,0.685738504770831,1.24233064311536,0.715308569841963,1.45346416632329,0.752875043322645,0.423073039458382,0.548783918618318,0.789209134313529,0.271608227691724,0,0.711810108745045,0.29551344712669,0.818462086339379,0.309873682371932,2.50778594275484,4.24677982494508,2.8071793013449,2.79332370262788,1.3390183244819,1.76473135295612,0|short_description=p3@Ggt6}} | ||
|EntrezGene=71522 | |||
|HGNC= | |||
|MCL_coexpression_id=2710 | |||
|UniProt=A7DTG9,Q7TNR0 | |||
|association_with_transcript=2bp_to_ENSMUST00000108499,ENSMUST00000169015_5end | |||
|description=CAGE_peak_3_at_Ggt6_5end | |||
|id=chr11:72249038..72249060,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.96e-07!9;CL:0002251!1.96e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.29e-11,9;CL:0002251,6.29e-11,9;CL:0000066,7.91e-09,25;CL:0000239,5.92e-08,6;CL:0000677,5.92e-08,6;CL:0000584,5.92e-08,6;CL:0000223,1.06e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.49e-14!59;UBERON:0000160!1.80e-13!43;UBERON:0000344!1.40e-11!15;UBERON:0001007!9.21e-11!128;UBERON:0001555!9.21e-11!128;UBERON:0007026!9.21e-11!128;UBERON:0001242!2.35e-10!13;UBERON:0000060!2.35e-10!13;UBERON:0001262!2.35e-10!13;UBERON:0004786!2.35e-10!13;UBERON:0004119!3.06e-10!130;UBERON:0000925!3.06e-10!130;UBERON:0006595!3.06e-10!130;UBERON:0004921!7.09e-10!126;UBERON:0004185!7.09e-10!126;UBERON:0003350!1.96e-07!9;UBERON:0004808!1.96e-07!9;UBERON:0001277!1.96e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.89e-25,47;UBERON:0000160,1.94e-23,31;UBERON:0000344,1.58e-17,15;UBERON:0001242,1.41e-15,13;UBERON:0001262,1.41e-15,13;UBERON:0004786,1.41e-15,13;UBERON:0001007,4.39e-14,116;UBERON:0001555,4.39e-14,116;UBERON:0007026,4.39e-14,116;UBERON:0004119,1.29e-13,118;UBERON:0000925,1.29e-13,118;UBERON:0006595,1.29e-13,118;UBERON:0004921,9.34e-13,114;UBERON:0003350,6.29e-11,9;UBERON:0004808,6.29e-11,9;UBERON:0001277,6.29e-11,9;UBERON:0004923,2.67e-09,24;UBERON:0000485,1.54e-08,11;UBERON:0000014,4.94e-08,5;UBERON:0001003,4.94e-08,5;UBERON:0002097,4.94e-08,5;UBERON:0002199,4.94e-08,5;UBERON:0007029,4.94e-08,5;UBERON:0007376,4.94e-08,5;UBERON:0002416,4.94e-08,5;UBERON:0007383,4.94e-08,5 | |||
|phase1_expression=0,5.93258192986914,4.09499315450582,7.25914107136392,5.50985302940982,3.69334398206158,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,4.15980299262857,3.67054849707472,2.29692785646008,3.87685796543167,3.44753972297422,11.4014051673824,7.81293402255785,9.3126814475228,0,0,0,4.33277429626912,3.65716219788683,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,8.60423876981386,0.679971333707751,12.9528765993076,16.8941868536394,14.7848872742121,2.94933282276679,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0,0,0,0,0,0,0.251333182659351,0,0.144599356919912,0.884610551949874,0,0,0,14.9113408974498,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.90422890701429,0,0,0.0937017245597288,0,0,0.189106080167819,0,1.09597866213787,3.61461423993277,9.05455632957633,12.1411460480687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,3.17340679996253,0,0,1.41754207454303,2.01683524623343,0.667134131534611,2.85338439168839,3.79623249235609,2.63518327558417,2.76468729680296,0.994782360205754,1.55971269695296,2.69645822596266,3.02593269824572,4.97853183135918,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.379419222745544,0.590440591918409,0.470996183524124,0.863780147452604,10.9687472022245,0,0,0,0,0,0.50925170356284,0.575392274901621,0.486405680325106,0,0,0,0.312037673114561,1.26289438973556,4.12614051100398,14.473305640901,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0.81931657357869,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,1.32745138339963,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,16.9832840529724,10.9795810153216,7.59942854094764,10.6241386162791,8.69946768648825,3.49777003955821,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0.406638934253697,2.48412283890143,4.39085421630384,6.11415178489297,6.60835297285622,3.71940550764012,4.97336289769656,7.12882353104861,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.596044064343795,0,0.147689527174577,0.201932899896295,0,0,0.38983152295901,0,0.116876902181569,12.6969014824518,0.221985953374065,0.0897138566094757,0,0.579568782096571,0.563047426353546,0.183151624267265,9.64657705855796,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0.628839487883947,1.2869045591501,1.55572709461131,0.824140228955577,0.962757628775446,0.758091635291392,1.52087579934144,0.754505365544305,0.936415074698824,0.576226371643824,0.402048282689293,0.952587382566147,0.347652977834566,0.38581844092741,0,0.441596760403192,0.685738504770831,1.24233064311536,0.715308569841963,1.45346416632329,0.752875043322645,0.423073039458382,0.548783918618318,0.789209134313529,0.271608227691724,0,0.711810108745045,0.29551344712669,0.818462086339379,0.309873682371932,2.50778594275484,4.24677982494508,2.8071793013449,2.79332370262788,1.3390183244819,1.76473135295612,0 | |||
|short_description=p3@Ggt6 | |||
}} |
Revision as of 20:48, 12 September 2013
Short description: | p3@Ggt6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ggt6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2710 |
Association with transcript: | 2bp_to_ENSMUST00000108499, ENSMUST00000169015_5end |
EntrezGene: | Ggt6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.29e-11 | 9 |
epithelial cell of alimentary canal | 6.29e-11 | 9 |
epithelial cell | 7.91e-09 | 25 |
brush border epithelial cell | 5.92e-08 | 6 |
gut absorptive cell | 5.92e-08 | 6 |
enterocyte | 5.92e-08 | 6 |
endodermal cell | 1.06e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 6.89e-25 | 47 |
intestine | 1.94e-23 | 31 |
mucosa | 1.58e-17 | 15 |
intestinal mucosa | 1.41e-15 | 13 |
wall of intestine | 1.41e-15 | 13 |
gastrointestinal system mucosa | 1.41e-15 | 13 |
digestive system | 4.39e-14 | 116 |
digestive tract | 4.39e-14 | 116 |
primitive gut | 4.39e-14 | 116 |
endoderm-derived structure | 1.29e-13 | 118 |
endoderm | 1.29e-13 | 118 |
presumptive endoderm | 1.29e-13 | 118 |
subdivision of digestive tract | 9.34e-13 | 114 |
epithelium of mucosa | 6.29e-11 | 9 |
gastrointestinal system epithelium | 6.29e-11 | 9 |
intestinal epithelium | 6.29e-11 | 9 |
organ component layer | 2.67e-09 | 24 |
simple columnar epithelium | 1.54e-08 | 11 |
zone of skin | 4.94e-08 | 5 |
skin epidermis | 4.94e-08 | 5 |
skin of body | 4.94e-08 | 5 |
integument | 4.94e-08 | 5 |
surface | 4.94e-08 | 5 |
outer epithelium | 4.94e-08 | 5 |
integumental system | 4.94e-08 | 5 |
enveloping layer of ectoderm | 4.94e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.