FFCP PHASE1:Mm9::chr12:52930512..52930540,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=207304|HGNC=|UniProt=F8WIE5,Q69ZR2|association_with_transcript=0bp_to_ENSMUST00000042052,NM_144788,uc007nmz.2_5end|description=CAGE_peak_2_at_Hectd1_5end|id=chr12:52930512..52930540,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!5.00e-09!25;UBERON:0002330!5.00e-09!25;UBERON:0005172!8.96e-09!49;UBERON:0005173!8.96e-09!49;UBERON:0002417!8.96e-09!49;UBERON:0000916!8.96e-09!49;UBERON:0005256!1.40e-08!47;UBERON:0002107!1.81e-08!22;UBERON:0007499!1.81e-08!22;UBERON:0006925!1.81e-08!22;UBERON:0009497!1.81e-08!22;UBERON:0000015!1.81e-08!22;UBERON:0002423!1.81e-08!22;UBERON:0006235!1.81e-08!22;UBERON:0008835!1.81e-08!22;UBERON:0003894!1.81e-08!22;UBERON:0004161!1.81e-08!22;UBERON:0008836!1.81e-08!22;UBERON:0004921!7.56e-08!126;UBERON:0004185!7.56e-08!126;UBERON:0009854!1.04e-07!23;UBERON:0009856!1.04e-07!23;UBERON:0004119!1.63e-07!130;UBERON:0000925!1.63e-07!130;UBERON:0006595!1.63e-07!130;UBERON:0003104!2.04e-07!131;UBERON:0009142!2.04e-07!131;UBERON:0001007!2.15e-07!128;UBERON:0001555!2.15e-07!128;UBERON:0007026!2.15e-07!128;UBERON:0002100!3.01e-07!98;UBERON:0009569!4.01e-07!66;UBERON:0000466!5.31e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.06e-09,90;UBERON:0002365,5.00e-09,25;UBERON:0002330,5.00e-09,25;UBERON:0005256,6.81e-09,45;UBERON:0005172,8.96e-09,49;UBERON:0005173,8.96e-09,49;UBERON:0002417,8.96e-09,49;UBERON:0000916,8.96e-09,49;UBERON:0003104,1.61e-08,61;UBERON:0009142,1.61e-08,61;UBERON:0002107,1.81e-08,22;UBERON:0007499,1.81e-08,22;UBERON:0006925,1.81e-08,22;UBERON:0009497,1.81e-08,22;UBERON:0000015,1.81e-08,22;UBERON:0002423,1.81e-08,22;UBERON:0006235,1.81e-08,22;UBERON:0008835,1.81e-08,22;UBERON:0003894,1.81e-08,22;UBERON:0004161,1.81e-08,22;UBERON:0008836,1.81e-08,22;UBERON:0005177,2.01e-08,79;UBERON:0009854,1.04e-07,23;UBERON:0009856,1.04e-07,23;UBERON:0009569,4.01e-07,66|phase1_expression=19.2178616525753,35.5954915792148,40.9499315450582,35.9932411455128,53.0949473743128,30.3861482160521,29.2015800744407,15.236552166106,40.124785813225,36.748130632553,18.4915405683545,17.9487357739507,12.3264525550468,9.61624426608971,54.6300009377687,49.6064405105074,54.5658264939954,14.5112596064789,14.3970155286026,9.33657233955666,9.43980520676875,17.9716621673602,16.7167865048919,13.2793710918528,14.9116032693661,31.5827580263261,32.7379117080897,30.8123862740821,20.332505881832,36.7963989449499,17.9601713630797,26.0362576118449,23.9875267157982,0,27.4409038763711,15.9585259544153,21.029443695024,53.5720487343242,24.2213956802378,37.1701858221397,43.5291301142951,56.0097297665925,37.3842971833988,13.9745467952891,16.2203089951223,16.3356609423897,8.60630478782843,7.84890562969608,0.659058548203415,6.80504646759992,5.31948402176378,2.87505128729943,15.1004345451963,16.6833292662609,12.4354705682712,21.0952737549477,20.3438742356517,21.1425557833751,8.6996078169627,7.40587370980846,9.50747105259269,6.77689064138264,8.89294796111139,4.04954872776629,2.96659908770092,4.2628806896766,4.49400165777607,7.68436610643109,9.85051316930538,4.45519596494579,7.99234853135252,10.2834354385369,6.40518768759679,7.96190194897201,5.94241920313065,2.75765635983006,12.1127469099328,8.93811366596314,8.90917892886212,6.4624280987795,7.50198677539759,7.8137005583514,4.4669279840221,7.87867654044352,10.8486755921535,15.3206864446307,13.2405663143166,15.8439528951505,23.5508461266202,16.92802946392,28.6965843814661,36.9982267101996,8.15965600449301,26.445456390253,24.6915038630114,36.7382047419815,15.5893306346245,14.1457167739788,8.57293815189467,9.18682893726885,18.7321748302985,16.6824420638613,43.3168907501298,85.3280043783997,14.0719176657289,10.6411143499541,13.6491600153991,29.8019926066747,11.6522047641227,24.0476265285016,20.9917245387024,16.1366703505435,17.9880087859726,19.1417753501831,28.691644541112,17.9703225601436,34.360100515078,23.4250958210257,15.0383793831479,33.4857379391137,28.04687284447,26.183263669302,13.0474232852686,16.1029438356351,12.1479089951804,28.6111901833622,22.0459829090893,18.5969846607956,15.1213570216947,10.7849260371472,8.23501085073528,10.178002521142,9.90798625095976,5.62574006126727,10.8049783170971,13.3037835715561,25.1543228710281,28.3647892991012,22.9977710174644,28.409650544674,13.1421647392331,15.1735388926092,16.7457780718975,20.3451504078215,29.5958771308276,26.6476538192488,26.0490794276046,24.3181168494675,12.7185115830377,18.3432897762785,15.3077478022636,14.6861140726475,19.1852601965663,28.5566776548177,28.6037169607041,18.7092210809384,17.5553296828309,12.8673953557358,16.76564646434,19.4698226183372,16.1822981386956,14.2249028554202,16.5721314909647,16.5281954667819,16.8151153047242,17.2075119115302,14.4867636755794,25.2213139513086,22.3801395882333,19.3717607613332,32.9950054851633,21.6375981389492,21.0768110679409,25.2308067269499,11.9865270681553,13.7892180588241,27.755177770639,27.7673094996721,15.5700422890721,19.043407092556,15.8506977426175,16.1346819698674,16.6783532883653,15.978952593455,19.455691523325,18.7756808385372,21.1121575392226,25.4664284212673,20.6661932346267,22.4704852163555,17.7233200897249,28.4772020753745,5.31070122668629,19.5364956562636,25.9227792048085,19.3468761453049,15.5161989734101,25.108623520734,25.800507146697,29.6696397439,19.7818397080132,26.5303902431871,25.4949259294948,36.0385428346763,38.1324450519614,39.5757317797343,40.7748843990891,47.5119004712261,35.3929933976174,44.5929013048756,51.5590021144613,35.1438608880744,31.629005436018,30.5155577088173,29.9556166189978,36.6239373023312,28.8829835770279,33.7710464954357,22.3551360101592,17.6227012946551,14.9927778326664,17.6534889206196,18.7752198630802,19.095713348367,19.0434912708811,33.953254727257,27.4285150744772,25.2469746199603,26.4694915971429,20.8106409688987,17.6138681503213,21.4080606700637,6.03165135757089,2.71952841909355,21.1458637398186,26.4899276452543,10.2752377592187,12.1900154055891,10.3279015587306,38.1231100078603,14.1978698737316,16.0079885161622,16.5876016254255,13.6212214832955,18.0466926006739,28.3076530788832,13.3587531552715,16.3663280430335,11.8586333383957,11.5675673911851,29.9493579789447,16.738166744722,29.4825396429973,29.3646818891113,31.8588332015911,17.2374251670037,17.8370898609203,18.1060876565662,18.6040192514887,22.4427657999067,32.3035366460276,23.9932261455154,25.6678112436999,20.8584260237639,32.6797686582496,38.1601510018291,16.000661470428,19.2665370613502,5.82114077022395,12.8602221018955,16.4926417287314,20.334045206636,23.0368628842969,17.3545020995322,23.2324990983073,22.0305353698373,43.2235660187725,42.0459945000774,47.9549347286839,41.9174828250683,38.9153841450225,51.8685243194394,25.6503136234269,10.3838169125885,29.3897914972307,17.9556575128004,24.4456776128019,40.3108497990039,32.2598377421619,44.8405219484784,27.5365056590046,26.590775941495,26.5343949704494,4.77335309007557,16.9239756565907,14.6390016331331,19.8729827112114,21.7451827855047,25.5484199583028,28.9958344727365,33.8052633916624,29.8401773861794,27.4783743378601,44.7364305422586,4.50954350947352,18.2410186173654,12.5748452747394,19.2506676460607,17.307416346016,16.2197880471147,27.5789510817522,26.8221032778537,16.3580577304109,7.9722759872582,8.3528701814781,12.6404448251271,15.8125667926328,12.0171819882848,13.1220031207573,14.6801890447335,11.9208812868759,12.3801313005568,11.3720935924424,12.2169404437259,14.02205242452,14.1156659191577,13.1568138998666,9.81360784731361,16.0121355988749,44.2124248049662,14.2071010159401,21.7107532994931,11.7519231454855,29.1716286988608,24.3987218086537,21.0624367907355,39.6581501296272,53.6682151317839,9.60078132449013,5.52390283808612,7.44764167471216,8.248952752497,7.53590771747707,4.5323633843382,9.45031500324528,6.75481804836331,8.15656336171568,9.31968561153276,16.5021882658841,17.9561193030464,17.9270286041841,26.0124187263075,20.9613162627982,23.3481255731518,27.1141007917971,25.1362769831451,24.0689407193861,20.9738685763952,24.8409713892435,26.5963141354367,22.4739617927718,26.6344634004256,25.9608319679372,20.4806287251722,24.6833614262542,22.9561972351809,24.3130681473951,23.5518272215036,26.0580631812916,28.0411773731753,23.6051828047848,20.4938447451583,26.2565171358772,27.2459037411198,30.3660434968802,20.5194374921517,26.6176063137889,35.3519631144375,27.7605942410567,30.8319029835514,25.3723246765207,25.8744524780563,25.0778594275484,19.2354145012218,24.3288872783225,31.1563028370033,40.361838066526,29.118067323776,21.3318408770788|short_description=p2@Hectd1}} | ||
|EntrezGene=207304 | |||
|HGNC= | |||
|UniProt=F8WIE5,Q69ZR2 | |||
|association_with_transcript=0bp_to_ENSMUST00000042052,NM_144788,uc007nmz.2_5end | |||
|description=CAGE_peak_2_at_Hectd1_5end | |||
|id=chr12:52930512..52930540,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!5.00e-09!25;UBERON:0002330!5.00e-09!25;UBERON:0005172!8.96e-09!49;UBERON:0005173!8.96e-09!49;UBERON:0002417!8.96e-09!49;UBERON:0000916!8.96e-09!49;UBERON:0005256!1.40e-08!47;UBERON:0002107!1.81e-08!22;UBERON:0007499!1.81e-08!22;UBERON:0006925!1.81e-08!22;UBERON:0009497!1.81e-08!22;UBERON:0000015!1.81e-08!22;UBERON:0002423!1.81e-08!22;UBERON:0006235!1.81e-08!22;UBERON:0008835!1.81e-08!22;UBERON:0003894!1.81e-08!22;UBERON:0004161!1.81e-08!22;UBERON:0008836!1.81e-08!22;UBERON:0004921!7.56e-08!126;UBERON:0004185!7.56e-08!126;UBERON:0009854!1.04e-07!23;UBERON:0009856!1.04e-07!23;UBERON:0004119!1.63e-07!130;UBERON:0000925!1.63e-07!130;UBERON:0006595!1.63e-07!130;UBERON:0003104!2.04e-07!131;UBERON:0009142!2.04e-07!131;UBERON:0001007!2.15e-07!128;UBERON:0001555!2.15e-07!128;UBERON:0007026!2.15e-07!128;UBERON:0002100!3.01e-07!98;UBERON:0009569!4.01e-07!66;UBERON:0000466!5.31e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.06e-09,90;UBERON:0002365,5.00e-09,25;UBERON:0002330,5.00e-09,25;UBERON:0005256,6.81e-09,45;UBERON:0005172,8.96e-09,49;UBERON:0005173,8.96e-09,49;UBERON:0002417,8.96e-09,49;UBERON:0000916,8.96e-09,49;UBERON:0003104,1.61e-08,61;UBERON:0009142,1.61e-08,61;UBERON:0002107,1.81e-08,22;UBERON:0007499,1.81e-08,22;UBERON:0006925,1.81e-08,22;UBERON:0009497,1.81e-08,22;UBERON:0000015,1.81e-08,22;UBERON:0002423,1.81e-08,22;UBERON:0006235,1.81e-08,22;UBERON:0008835,1.81e-08,22;UBERON:0003894,1.81e-08,22;UBERON:0004161,1.81e-08,22;UBERON:0008836,1.81e-08,22;UBERON:0005177,2.01e-08,79;UBERON:0009854,1.04e-07,23;UBERON:0009856,1.04e-07,23;UBERON:0009569,4.01e-07,66 | |||
|phase1_expression=19.2178616525753,35.5954915792148,40.9499315450582,35.9932411455128,53.0949473743128,30.3861482160521,29.2015800744407,15.236552166106,40.124785813225,36.748130632553,18.4915405683545,17.9487357739507,12.3264525550468,9.61624426608971,54.6300009377687,49.6064405105074,54.5658264939954,14.5112596064789,14.3970155286026,9.33657233955666,9.43980520676875,17.9716621673602,16.7167865048919,13.2793710918528,14.9116032693661,31.5827580263261,32.7379117080897,30.8123862740821,20.332505881832,36.7963989449499,17.9601713630797,26.0362576118449,23.9875267157982,0,27.4409038763711,15.9585259544153,21.029443695024,53.5720487343242,24.2213956802378,37.1701858221397,43.5291301142951,56.0097297665925,37.3842971833988,13.9745467952891,16.2203089951223,16.3356609423897,8.60630478782843,7.84890562969608,0.659058548203415,6.80504646759992,5.31948402176378,2.87505128729943,15.1004345451963,16.6833292662609,12.4354705682712,21.0952737549477,20.3438742356517,21.1425557833751,8.6996078169627,7.40587370980846,9.50747105259269,6.77689064138264,8.89294796111139,4.04954872776629,2.96659908770092,4.2628806896766,4.49400165777607,7.68436610643109,9.85051316930538,4.45519596494579,7.99234853135252,10.2834354385369,6.40518768759679,7.96190194897201,5.94241920313065,2.75765635983006,12.1127469099328,8.93811366596314,8.90917892886212,6.4624280987795,7.50198677539759,7.8137005583514,4.4669279840221,7.87867654044352,10.8486755921535,15.3206864446307,13.2405663143166,15.8439528951505,23.5508461266202,16.92802946392,28.6965843814661,36.9982267101996,8.15965600449301,26.445456390253,24.6915038630114,36.7382047419815,15.5893306346245,14.1457167739788,8.57293815189467,9.18682893726885,18.7321748302985,16.6824420638613,43.3168907501298,85.3280043783997,14.0719176657289,10.6411143499541,13.6491600153991,29.8019926066747,11.6522047641227,24.0476265285016,20.9917245387024,16.1366703505435,17.9880087859726,19.1417753501831,28.691644541112,17.9703225601436,34.360100515078,23.4250958210257,15.0383793831479,33.4857379391137,28.04687284447,26.183263669302,13.0474232852686,16.1029438356351,12.1479089951804,28.6111901833622,22.0459829090893,18.5969846607956,15.1213570216947,10.7849260371472,8.23501085073528,10.178002521142,9.90798625095976,5.62574006126727,10.8049783170971,13.3037835715561,25.1543228710281,28.3647892991012,22.9977710174644,28.409650544674,13.1421647392331,15.1735388926092,16.7457780718975,20.3451504078215,29.5958771308276,26.6476538192488,26.0490794276046,24.3181168494675,12.7185115830377,18.3432897762785,15.3077478022636,14.6861140726475,19.1852601965663,28.5566776548177,28.6037169607041,18.7092210809384,17.5553296828309,12.8673953557358,16.76564646434,19.4698226183372,16.1822981386956,14.2249028554202,16.5721314909647,16.5281954667819,16.8151153047242,17.2075119115302,14.4867636755794,25.2213139513086,22.3801395882333,19.3717607613332,32.9950054851633,21.6375981389492,21.0768110679409,25.2308067269499,11.9865270681553,13.7892180588241,27.755177770639,27.7673094996721,15.5700422890721,19.043407092556,15.8506977426175,16.1346819698674,16.6783532883653,15.978952593455,19.455691523325,18.7756808385372,21.1121575392226,25.4664284212673,20.6661932346267,22.4704852163555,17.7233200897249,28.4772020753745,5.31070122668629,19.5364956562636,25.9227792048085,19.3468761453049,15.5161989734101,25.108623520734,25.800507146697,29.6696397439,19.7818397080132,26.5303902431871,25.4949259294948,36.0385428346763,38.1324450519614,39.5757317797343,40.7748843990891,47.5119004712261,35.3929933976174,44.5929013048756,51.5590021144613,35.1438608880744,31.629005436018,30.5155577088173,29.9556166189978,36.6239373023312,28.8829835770279,33.7710464954357,22.3551360101592,17.6227012946551,14.9927778326664,17.6534889206196,18.7752198630802,19.095713348367,19.0434912708811,33.953254727257,27.4285150744772,25.2469746199603,26.4694915971429,20.8106409688987,17.6138681503213,21.4080606700637,6.03165135757089,2.71952841909355,21.1458637398186,26.4899276452543,10.2752377592187,12.1900154055891,10.3279015587306,38.1231100078603,14.1978698737316,16.0079885161622,16.5876016254255,13.6212214832955,18.0466926006739,28.3076530788832,13.3587531552715,16.3663280430335,11.8586333383957,11.5675673911851,29.9493579789447,16.738166744722,29.4825396429973,29.3646818891113,31.8588332015911,17.2374251670037,17.8370898609203,18.1060876565662,18.6040192514887,22.4427657999067,32.3035366460276,23.9932261455154,25.6678112436999,20.8584260237639,32.6797686582496,38.1601510018291,16.000661470428,19.2665370613502,5.82114077022395,12.8602221018955,16.4926417287314,20.334045206636,23.0368628842969,17.3545020995322,23.2324990983073,22.0305353698373,43.2235660187725,42.0459945000774,47.9549347286839,41.9174828250683,38.9153841450225,51.8685243194394,25.6503136234269,10.3838169125885,29.3897914972307,17.9556575128004,24.4456776128019,40.3108497990039,32.2598377421619,44.8405219484784,27.5365056590046,26.590775941495,26.5343949704494,4.77335309007557,16.9239756565907,14.6390016331331,19.8729827112114,21.7451827855047,25.5484199583028,28.9958344727365,33.8052633916624,29.8401773861794,27.4783743378601,44.7364305422586,4.50954350947352,18.2410186173654,12.5748452747394,19.2506676460607,17.307416346016,16.2197880471147,27.5789510817522,26.8221032778537,16.3580577304109,7.9722759872582,8.3528701814781,12.6404448251271,15.8125667926328,12.0171819882848,13.1220031207573,14.6801890447335,11.9208812868759,12.3801313005568,11.3720935924424,12.2169404437259,14.02205242452,14.1156659191577,13.1568138998666,9.81360784731361,16.0121355988749,44.2124248049662,14.2071010159401,21.7107532994931,11.7519231454855,29.1716286988608,24.3987218086537,21.0624367907355,39.6581501296272,53.6682151317839,9.60078132449013,5.52390283808612,7.44764167471216,8.248952752497,7.53590771747707,4.5323633843382,9.45031500324528,6.75481804836331,8.15656336171568,9.31968561153276,16.5021882658841,17.9561193030464,17.9270286041841,26.0124187263075,20.9613162627982,23.3481255731518,27.1141007917971,25.1362769831451,24.0689407193861,20.9738685763952,24.8409713892435,26.5963141354367,22.4739617927718,26.6344634004256,25.9608319679372,20.4806287251722,24.6833614262542,22.9561972351809,24.3130681473951,23.5518272215036,26.0580631812916,28.0411773731753,23.6051828047848,20.4938447451583,26.2565171358772,27.2459037411198,30.3660434968802,20.5194374921517,26.6176063137889,35.3519631144375,27.7605942410567,30.8319029835514,25.3723246765207,25.8744524780563,25.0778594275484,19.2354145012218,24.3288872783225,31.1563028370033,40.361838066526,29.118067323776,21.3318408770788 | |||
|short_description=p2@Hectd1 | |||
}} |
Revision as of 22:54, 12 September 2013
Short description: | p2@Hectd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hectd1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000042052, NM_144788, uc007nmz.2_5end |
EntrezGene: | Hectd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 2.06e-09 | 90 |
exocrine gland | 5.00e-09 | 25 |
exocrine system | 5.00e-09 | 25 |
trunk mesenchyme | 6.81e-09 | 45 |
abdomen element | 8.96e-09 | 49 |
abdominal segment element | 8.96e-09 | 49 |
abdominal segment of trunk | 8.96e-09 | 49 |
abdomen | 8.96e-09 | 49 |
mesenchyme | 1.61e-08 | 61 |
entire embryonic mesenchyme | 1.61e-08 | 61 |
liver | 1.81e-08 | 22 |
epithelial sac | 1.81e-08 | 22 |
digestive gland | 1.81e-08 | 22 |
epithelium of foregut-midgut junction | 1.81e-08 | 22 |
anatomical boundary | 1.81e-08 | 22 |
hepatobiliary system | 1.81e-08 | 22 |
foregut-midgut junction | 1.81e-08 | 22 |
hepatic diverticulum | 1.81e-08 | 22 |
liver primordium | 1.81e-08 | 22 |
septum transversum | 1.81e-08 | 22 |
liver bud | 1.81e-08 | 22 |
trunk region element | 2.01e-08 | 79 |
digestive tract diverticulum | 1.04e-07 | 23 |
sac | 1.04e-07 | 23 |
subdivision of trunk | 4.01e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.