FFCP PHASE1:Mm9::chr7:29607052..29607063,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2721|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:29607052..29607063,+|id=chr7:29607052..29607063,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,4.94e-13,3;CL:0002202,4.94e-13,3;CL:0000069,4.94e-13,3;CL:0002632,4.94e-13,3;CL:0002368,4.94e-13,3;CL:0000307,4.94e-13,3;CL:0000377,4.94e-13,3;CL:0000128,2.00e-12,6;CL:0000126,2.00e-12,6;CL:0000127,2.00e-12,6;CL:0002453,2.35e-09,8;CL:0000219,2.03e-08,54;CL:0000333,1.66e-07,10;CL:0000095,1.66e-07,10;CL:0000243,1.66e-07,10;CL:0000123,1.66e-07,10;CL:0000125,1.66e-07,10;CL:0000030,1.66e-07,10;CL:0000339,1.66e-07,10;CL:0002319,2.06e-07,43;CL:0002321,2.55e-07,70;CL:0002608,2.62e-07,3;CL:0000221,3.25e-07,44;CL:0000133,3.25e-07,44;CL:0000120,7.34e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.94e-13,3;UBERON:0001005,4.94e-13,3;UBERON:0007196,4.94e-13,3;UBERON:0001558,4.94e-13,3|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0.274228867211478,0.42438965179803,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0,0,0,9.84103660135312,0,0,0,0,0,0,0,0,0.683045484958446,0.485510353031154,0,0,0,0,8.06693078607652,0.219686182734472,2.91644848611425,4.75953833526233,4.31257693094915,0,0.725362142011344,0,0.257259436035947,0.573066879877513,0,0.202316460859598,1.5869729378161,7.60597684207415,0.338844532069132,6.22506357277798,0.449949858640699,0,0,0.299600110518405,0,0.311068836925433,0.405017814995072,0,0.571301968807607,0,0.122490799214954,10.543001812006,6.43453150627015,0,0.893811366596314,0.307213066512487,0,7.68496206260241,0,0,0,0.30559649555362,0,0.427115042397309,0,0.227178579999552,0,0,0,0,0,0.649776417447669,0,0,0,0.259786004602869,1.7666978725517,0,0,0,0,1.73192832808971,1.26679932737549,1.01104889002957,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.11981512450592,1.79970819298022,0.127070227073065,0,0,0.376963056338593,0,0.255715457330331,0,0,0.101839363850316,0,0,0,0,0,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0.411564272815887,0,6.31991868581911,3.86021860672073,0,0,0.469052119962192,0.36012412292203,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,2.17562273527484,0,0,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0,0.302478555410522,0.194915761479505,0.192423683280659,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.407412341537585,0,0,0,0,0.154936841185966,0,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p@chr7:29607052..29607063,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2721 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:29607052..29607063,+ | |||
|id=chr7:29607052..29607063,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.94e-13,3;CL:0002202,4.94e-13,3;CL:0000069,4.94e-13,3;CL:0002632,4.94e-13,3;CL:0002368,4.94e-13,3;CL:0000307,4.94e-13,3;CL:0000377,4.94e-13,3;CL:0000128,2.00e-12,6;CL:0000126,2.00e-12,6;CL:0000127,2.00e-12,6;CL:0002453,2.35e-09,8;CL:0000219,2.03e-08,54;CL:0000333,1.66e-07,10;CL:0000095,1.66e-07,10;CL:0000243,1.66e-07,10;CL:0000123,1.66e-07,10;CL:0000125,1.66e-07,10;CL:0000030,1.66e-07,10;CL:0000339,1.66e-07,10;CL:0002319,2.06e-07,43;CL:0002321,2.55e-07,70;CL:0002608,2.62e-07,3;CL:0000221,3.25e-07,44;CL:0000133,3.25e-07,44;CL:0000120,7.34e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.94e-13,3;UBERON:0001005,4.94e-13,3;UBERON:0007196,4.94e-13,3;UBERON:0001558,4.94e-13,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0.274228867211478,0.42438965179803,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0,0,0,9.84103660135312,0,0,0,0,0,0,0,0,0.683045484958446,0.485510353031154,0,0,0,0,8.06693078607652,0.219686182734472,2.91644848611425,4.75953833526233,4.31257693094915,0,0.725362142011344,0,0.257259436035947,0.573066879877513,0,0.202316460859598,1.5869729378161,7.60597684207415,0.338844532069132,6.22506357277798,0.449949858640699,0,0,0.299600110518405,0,0.311068836925433,0.405017814995072,0,0.571301968807607,0,0.122490799214954,10.543001812006,6.43453150627015,0,0.893811366596314,0.307213066512487,0,7.68496206260241,0,0,0,0.30559649555362,0,0.427115042397309,0,0.227178579999552,0,0,0,0,0,0.649776417447669,0,0,0,0.259786004602869,1.7666978725517,0,0,0,0,1.73192832808971,1.26679932737549,1.01104889002957,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.11981512450592,1.79970819298022,0.127070227073065,0,0,0.376963056338593,0,0.255715457330331,0,0,0.101839363850316,0,0,0,0,0,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0.411564272815887,0,6.31991868581911,3.86021860672073,0,0,0.469052119962192,0.36012412292203,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,2.17562273527484,0,0,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0,0.302478555410522,0.194915761479505,0.192423683280659,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.407412341537585,0,0,0,0,0.154936841185966,0,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr7:29607052..29607063,+ | |||
}} |
Revision as of 13:06, 14 September 2013
Short description: | p@chr7:29607052..29607063, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29607052..29607063, + |
Coexpression cluster: | MCL_coexpression_mm9:2721 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.94e-13 | 3 |
epithelial cell of tracheobronchial tree | 4.94e-13 | 3 |
branched duct epithelial cell | 4.94e-13 | 3 |
epithelial cell of lower respiratory tract | 4.94e-13 | 3 |
respiratory epithelial cell | 4.94e-13 | 3 |
tracheal epithelial cell | 4.94e-13 | 3 |
tracheoblast | 4.94e-13 | 3 |
oligodendrocyte | 2.00e-12 | 6 |
macroglial cell | 2.00e-12 | 6 |
astrocyte | 2.00e-12 | 6 |
oligodendrocyte precursor cell | 2.35e-09 | 8 |
motile cell | 2.03e-08 | 54 |
migratory neural crest cell | 1.66e-07 | 10 |
neuron associated cell | 1.66e-07 | 10 |
glial cell (sensu Vertebrata) | 1.66e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.66e-07 | 10 |
glial cell | 1.66e-07 | 10 |
glioblast | 1.66e-07 | 10 |
glioblast (sensu Vertebrata) | 1.66e-07 | 10 |
neural cell | 2.06e-07 | 43 |
embryonic cell | 2.55e-07 | 70 |
hippocampal neuron | 2.62e-07 | 3 |
ectodermal cell | 3.25e-07 | 44 |
neurectodermal cell | 3.25e-07 | 44 |
granule cell | 7.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.94e-13 | 3 |
respiratory airway | 4.94e-13 | 3 |
tracheobronchial tree | 4.94e-13 | 3 |
lower respiratory tract | 4.94e-13 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.