FFCP PHASE1:Mm9::chr2:45535559..45535562,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=180|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:45535559..45535562,+|id=chr2:45535559..45535562,+|ontology_enrichment_celltype=CL:0000239!2.45e-08!6;CL:0000677!2.45e-08!6;CL:0000212!2.45e-08!6;CL:0000584!2.45e-08!6;CL:0000075!2.84e-07!7|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001962!1.84e-23!2;UBERON:0001961!1.84e-23!2;UBERON:0001744!1.84e-23!2;UBERON:0000344!1.16e-18!15;UBERON:0004923!1.29e-16!24;UBERON:0002465!5.28e-16!3;UBERON:0003199!1.20e-12!1;UBERON:0000305!4.30e-12!1;UBERON:0001242!3.08e-08!13;UBERON:0000060!3.08e-08!13;UBERON:0001262!3.08e-08!13;UBERON:0004786!3.08e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.68e-58,2;UBERON:0001961,1.68e-58,2;UBERON:0001744,1.68e-58,2;UBERON:0002465,1.70e-39,3;UBERON:0003199,2.87e-30,1;UBERON:0000344,2.29e-18,15;UBERON:0004923,6.63e-12,24|phase1_expression=0,0,0,1.20985684522732,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,3.89995777814189,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:45535559..45535562,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=180 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:45535559..45535562,+ | |||
|id=chr2:45535559..45535562,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.45e-08!6;CL:0000677!2.45e-08!6;CL:0000212!2.45e-08!6;CL:0000584!2.45e-08!6;CL:0000075!2.84e-07!7 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001962!1.84e-23!2;UBERON:0001961!1.84e-23!2;UBERON:0001744!1.84e-23!2;UBERON:0000344!1.16e-18!15;UBERON:0004923!1.29e-16!24;UBERON:0002465!5.28e-16!3;UBERON:0003199!1.20e-12!1;UBERON:0000305!4.30e-12!1;UBERON:0001242!3.08e-08!13;UBERON:0000060!3.08e-08!13;UBERON:0001262!3.08e-08!13;UBERON:0004786!3.08e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.68e-58,2;UBERON:0001961,1.68e-58,2;UBERON:0001744,1.68e-58,2;UBERON:0002465,1.70e-39,3;UBERON:0003199,2.87e-30,1;UBERON:0000344,2.29e-18,15;UBERON:0004923,6.63e-12,24 | |||
|phase1_expression=0,0,0,1.20985684522732,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,3.89995777814189,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:45535559..45535562,+ | |||
}} |
Revision as of 00:03, 14 September 2013
Short description: | p@chr2:45535559..45535562, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:45535559..45535562, + |
Coexpression cluster: | MCL_coexpression_mm9:180 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 1.68e-58 | 2 |
mucosa-associated lymphoid tissue | 1.68e-58 | 2 |
lymphoid tissue | 1.68e-58 | 2 |
lymphoid system | 1.70e-39 | 3 |
egg chamber | 2.87e-30 | 1 |
mucosa | 2.29e-18 | 15 |
organ component layer | 6.63e-12 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.