FFCP PHASE1:Mm9::chr16:21855200..21855215,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=217|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:21855200..21855215,+|id=chr16:21855200..21855215,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.38e-07,6;CL:0000677,2.38e-07,6;CL:0000584,2.38e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.11e-16!43;UBERON:0005409!2.44e-12!59;UBERON:0000344!6.01e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.23e-47,31;UBERON:0005409,4.01e-30,47;UBERON:0004921,6.22e-11,114;UBERON:0001007,1.07e-10,116;UBERON:0001555,1.07e-10,116;UBERON:0007026,1.07e-10,116;UBERON:0004119,1.80e-10,118;UBERON:0000925,1.80e-10,118;UBERON:0006595,1.80e-10,118|phase1_expression=0,1.39590163055744,0.909998478779072,3.32710632437513,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.22940928106717,0,0.86152399231815,0.430942465371778,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,2.64450566663544,0,0,0,2.01683524623343,2.89091456998331,4.1849637744763,5.21981967698963,5.10566759644434,3.77002813200404,4.57599885694647,3.70431765526328,6.29173586057955,3.8904848977445,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.128050304809739,0.34461281373368,0,0.579421629724277,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0,0.238436189947321,0.436039249896986,0.282328141245992,0.507687647350059,0.73171189149109,0,0.271608227691724,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr16:21855200..21855215,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=217 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:21855200..21855215,+ | |||
|id=chr16:21855200..21855215,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.38e-07,6;CL:0000677,2.38e-07,6;CL:0000584,2.38e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.11e-16!43;UBERON:0005409!2.44e-12!59;UBERON:0000344!6.01e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.23e-47,31;UBERON:0005409,4.01e-30,47;UBERON:0004921,6.22e-11,114;UBERON:0001007,1.07e-10,116;UBERON:0001555,1.07e-10,116;UBERON:0007026,1.07e-10,116;UBERON:0004119,1.80e-10,118;UBERON:0000925,1.80e-10,118;UBERON:0006595,1.80e-10,118 | |||
|phase1_expression=0,1.39590163055744,0.909998478779072,3.32710632437513,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.22940928106717,0,0.86152399231815,0.430942465371778,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,2.64450566663544,0,0,0,2.01683524623343,2.89091456998331,4.1849637744763,5.21981967698963,5.10566759644434,3.77002813200404,4.57599885694647,3.70431765526328,6.29173586057955,3.8904848977445,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.128050304809739,0.34461281373368,0,0.579421629724277,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0,0.238436189947321,0.436039249896986,0.282328141245992,0.507687647350059,0.73171189149109,0,0.271608227691724,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr16:21855200..21855215,+ | |||
}} |
Revision as of 12:12, 13 September 2013
Short description: | p@chr16:21855200..21855215, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:21855200..21855215, + |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.38e-07 | 6 |
gut absorptive cell | 2.38e-07 | 6 |
enterocyte | 2.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.23e-47 | 31 |
gastrointestinal system | 4.01e-30 | 47 |
subdivision of digestive tract | 6.22e-11 | 114 |
digestive system | 1.07e-10 | 116 |
digestive tract | 1.07e-10 | 116 |
primitive gut | 1.07e-10 | 116 |
endoderm-derived structure | 1.80e-10 | 118 |
endoderm | 1.80e-10 | 118 |
presumptive endoderm | 1.80e-10 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.