FFCP PHASE1:Mm9::chr7:104230314..104230327,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14389|HGNC=|UniProt=Q3ZB57,Q3ZB59|association_with_transcript=53bp_to_ENSMUST00000004622,NM_001162477,NM_010248,uc009iix.2,uc009iiy.2_5end|description=CAGE_peak_4_at_Gab2_5end|id=chr7:104230314..104230327,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,6.54e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!3.74e-09!24;UBERON:0005156!5.92e-09!26;UBERON:0000990!5.92e-09!26;UBERON:0000991!1.84e-08!18;UBERON:0005564!1.84e-08!18;UBERON:0004176!5.46e-08!17;UBERON:0009196!5.46e-08!17;UBERON:0009117!5.46e-08!17;UBERON:0000473!1.67e-07!14;UBERON:0003135!3.31e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0003133,1.01e-09,24;UBERON:0005156,2.69e-09,26;UBERON:0000990,2.69e-09,26;UBERON:0000991,4.33e-09,18;UBERON:0005564,4.33e-09,18;UBERON:0004176,1.52e-08,17;UBERON:0009196,1.52e-08,17;UBERON:0009117,1.52e-08,17;UBERON:0000473,1.68e-08,14;UBERON:0003135,3.74e-08,15;UBERON:0003101,3.02e-07,16;UBERON:0000079,3.02e-07,16;UBERON:0002410,6.54e-07,9|phase1_expression=1.44133962394315,0.348975407639361,0.454999239389536,4.53696316960245,4.50806156951712,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,3.82694805679814,1.78723712161594,1.04479915655574,0.639969691173627,0,0.57423196411502,0.86152399231815,0.861884930743556,0.950117097281869,0.252030129759931,0.221730510655305,0,0,0,0,0.498703936075477,0.816677425049476,4.18531630736908,1.5626706890476,1.57057123192139,5.29408339227913,3.41522742479223,0.971020706062307,0.251793635951155,0.304130793658544,0.734187008646726,0.782391344348039,0,0,0.58328969722285,0.139986421625363,0,0,0,0,0.771778308107841,1.14613375975503,0,0.404632921719196,2.11596391708813,0,0,0,0.899899717281399,0,1.4209602298922,0.898800331555214,0.768436610643109,0.829516898467821,0.945041568321835,0.630974884054146,1.14260393761521,0.883474163806454,0.61245399607477,0.862609239164127,0,1.10115880999389,1.0214987046815,1.84327839907492,1.05509030184155,2.47016637726506,0,1.3959149950069,0,1.98637722109853,1.17851434189467,1.42371680799103,1.1183966749518,0.757261933331841,2.11600368298999,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0,0.702222100658759,0,0.779358013808606,0.35333957451034,0.563373679106722,0,0,0,0.432982082022428,0,0,1.25602267690966,0.776813650941515,1.92974780784272,1.90833859442749,0.304465478312141,0.922461989024234,2.41156224884196,2.23418543557839,0.251333182659351,1.73036477414062,1.59059292611903,1.76922110389975,0.647067399789637,0.662524555381181,0,0,0.585561594023094,1.25668024088073,1.78819938646014,4.07371423320129,2.39961092397363,1.90605340609597,1.19832511523858,0.457500602818626,0.628271760564322,1.39059456153821,1.27857728665165,3.1168206683934,2.27137768294861,2.54598409625791,1.24406970610093,1.0108910337347,1.26265113531884,1.43132487258974,0.689706313300419,1.0803727788321,0.90422890701429,2.04109497453984,1.2811372028485,1.78033276663485,1.81092359517311,1.07783996466421,1.32374256117473,0.879755620819744,0.43839146485515,0,0.348252166522167,0.205782136407943,2.58744546864041,0.702213187313235,1.28673953557358,1.98914449576915,1.03562886267751,1.64168241986767,1.08037236876609,1.42046841351126,1.37734962223183,1.54267112887378,0.232533944750408,1.07309360559848,1.16765342367169,1.31647879930784,1.64167464079095,2.02672023864639,2.19299981137998,1.75640092232841,1.74468344388483,1.05144974282064,0.823236899034275,0.991256348951394,1.05780226665418,1.06644125267617,0.464473343720877,0.644337306610467,0.403367049246685,1.77902435075896,2.09248188723815,0,2.47048432086016,1.25667604400135,1.1937388322469,1.9496408711912,2.69645822596266,0.864552199498777,1.7922714592893,1.32767530667157,2.97046132785295,3.38123207019241,1.83286195060783,3.29719228184964,4.48869247298039,2.08680572510049,1.62371162777562,1.255989822731,2.83813477020141,0,1.00107063429656,0.393117990226406,0.224862112384854,0.608580364165509,0.72353147925725,0.50925170356284,0.287696137450811,0.810676133875177,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,2.03228509183265,1.13694847062291,1.79261474086228,0.848725428875941,0.469380496577004,2.34508760418542,0.714130922658041,1.17080188714679,2.20689201748667,2.21464689648775,1.43509291791738,2.13022309130459,1.72684981865896,2.31438493730419,3.01582567878545,0.54390568381871,1.47529281905711,1.93155722413313,2.24770825982909,1.28932855251423,0,1.00988370881749,2.52406575533005,1.17131623288992,5.60100834105277,8.12493913038677,4.45597348164788,5.37845408498782,4.04810701674894,6.42962887404886,3.95287777946523,0.642642632843614,4.68402281187286,0.890328018336276,1.95464351224291,1.97964147567043,0,0.971122544619926,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,1.55056975900933,1.45413491791002,1.42598951353889,0.316036757935816,0,0,0,0.900305470156551,0.776152102696527,1.07168517515796,1.77340233642274,1.0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| ||
|EntrezGene=14389 | |||
|HGNC= | |||
|UniProt=Q3ZB57,Q3ZB59 | |||
|association_with_transcript=53bp_to_ENSMUST00000004622,NM_001162477,NM_010248,uc009iix.2,uc009iiy.2_5end | |||
|description=CAGE_peak_4_at_Gab2_5end | |||
|id=chr7:104230314..104230327,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,6.54e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!3.74e-09!24;UBERON:0005156!5.92e-09!26;UBERON:0000990!5.92e-09!26;UBERON:0000991!1.84e-08!18;UBERON:0005564!1.84e-08!18;UBERON:0004176!5.46e-08!17;UBERON:0009196!5.46e-08!17;UBERON:0009117!5.46e-08!17;UBERON:0000473!1.67e-07!14;UBERON:0003135!3.31e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,1.01e-09,24;UBERON:0005156,2.69e-09,26;UBERON:0000990,2.69e-09,26;UBERON:0000991,4.33e-09,18;UBERON:0005564,4.33e-09,18;UBERON:0004176,1.52e-08,17;UBERON:0009196,1.52e-08,17;UBERON:0009117,1.52e-08,17;UBERON:0000473,1.68e-08,14;UBERON:0003135,3.74e-08,15;UBERON:0003101,3.02e-07,16;UBERON:0000079,3.02e-07,16;UBERON:0002410,6.54e-07,9 | |||
|phase1_expression=1.44133962394315,0.348975407639361,0.454999239389536,4.53696316960245,4.50806156951712,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,3.82694805679814,1.78723712161594,1.04479915655574,0.639969691173627,0,0.57423196411502,0.86152399231815,0.861884930743556,0.950117097281869,0.252030129759931,0.221730510655305,0,0,0,0,0.498703936075477,0.816677425049476,4.18531630736908,1.5626706890476,1.57057123192139,5.29408339227913,3.41522742479223,0.971020706062307,0.251793635951155,0.304130793658544,0.734187008646726,0.782391344348039,0,0,0.58328969722285,0.139986421625363,0,0,0,0,0.771778308107841,1.14613375975503,0,0.404632921719196,2.11596391708813,0,0,0,0.899899717281399,0,1.4209602298922,0.898800331555214,0.768436610643109,0.829516898467821,0.945041568321835,0.630974884054146,1.14260393761521,0.883474163806454,0.61245399607477,0.862609239164127,0,1.10115880999389,1.0214987046815,1.84327839907492,1.05509030184155,2.47016637726506,0,1.3959149950069,0,1.98637722109853,1.17851434189467,1.42371680799103,1.1183966749518,0.757261933331841,2.11600368298999,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0,0.702222100658759,0,0.779358013808606,0.35333957451034,0.563373679106722,0,0,0,0.432982082022428,0,0,1.25602267690966,0.776813650941515,1.92974780784272,1.90833859442749,0.304465478312141,0.922461989024234,2.41156224884196,2.23418543557839,0.251333182659351,1.73036477414062,1.59059292611903,1.76922110389975,0.647067399789637,0.662524555381181,0,0,0.585561594023094,1.25668024088073,1.78819938646014,4.07371423320129,2.39961092397363,1.90605340609597,1.19832511523858,0.457500602818626,0.628271760564322,1.39059456153821,1.27857728665165,3.1168206683934,2.27137768294861,2.54598409625791,1.24406970610093,1.0108910337347,1.26265113531884,1.43132487258974,0.689706313300419,1.0803727788321,0.90422890701429,2.04109497453984,1.2811372028485,1.78033276663485,1.81092359517311,1.07783996466421,1.32374256117473,0.879755620819744,0.43839146485515,0,0.348252166522167,0.205782136407943,2.58744546864041,0.702213187313235,1.28673953557358,1.98914449576915,1.03562886267751,1.64168241986767,1.08037236876609,1.42046841351126,1.37734962223183,1.54267112887378,0.232533944750408,1.07309360559848,1.16765342367169,1.31647879930784,1.64167464079095,2.02672023864639,2.19299981137998,1.75640092232841,1.74468344388483,1.05144974282064,0.823236899034275,0.991256348951394,1.05780226665418,1.06644125267617,0.464473343720877,0.644337306610467,0.403367049246685,1.77902435075896,2.09248188723815,0,2.47048432086016,1.25667604400135,1.1937388322469,1.9496408711912,2.69645822596266,0.864552199498777,1.7922714592893,1.32767530667157,2.97046132785295,3.38123207019241,1.83286195060783,3.29719228184964,4.48869247298039,2.08680572510049,1.62371162777562,1.255989822731,2.83813477020141,0,1.00107063429656,0.393117990226406,0.224862112384854,0.608580364165509,0.72353147925725,0.50925170356284,0.287696137450811,0.810676133875177,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,2.03228509183265,1.13694847062291,1.79261474086228,0.848725428875941,0.469380496577004,2.34508760418542,0.714130922658041,1.17080188714679,2.20689201748667,2.21464689648775,1.43509291791738,2.13022309130459,1.72684981865896,2.31438493730419,3.01582567878545,0.54390568381871,1.47529281905711,1.93155722413313,2.24770825982909,1.28932855251423,0,1.00988370881749,2.52406575533005,1.17131623288992,5.60100834105277,8.12493913038677,4.45597348164788,5.37845408498782,4.04810701674894,6.42962887404886,3.95287777946523,0.642642632843614,4.68402281187286,0.890328018336276,1.95464351224291,1.97964147567043,0,0.971122544619926,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,1.55056975900933,1.45413491791002,1.42598951353889,0.316036757935816,0,0,0,0.900305470156551,0.776152102696527,1.07168517515796,1.77340233642274,1.07021290561242,0.987294123612726,0.608929898229199,2.11204537257339,3.38931313382112,0.661585194164886,0.65954501176592,2.09903754704677,0.482503399425247,0.596861720015682,0,0.582961673259701,3.15223013417866,1.02522528478712,1.03193433981611,1.29636169158798,0.565105371014073,0.410082683163076,0.457556346413045,5.43930975980337,3.63873776041511,3.04039942369732,0,0.790839983952838,1.82987520414164,0.432021363287205,0.627264888043406,0.436725127492355,1.07891477107857,1.32245529160537,0.785267825952089,0.259229946583586,1.24267862617385,10.7101658349996,3.58839710505549,2.64733584731356,2.33341426012857,2.32487682259916,1.68956125490778,5.04636126176742,3.25510962109875,2.62148361064277,12.3207901621263,9.21696020025169,0.316011120628178,0.810900861160657,0.308132871494482,0,0.179026695667481,0.79472541912506,0,0,0.302899349844443,0.15241361331,0.100826185136841,0.38983152295901,0.0962118416403295,0,0.906921534460845,0.443971906748129,0.0897138566094757,0.503653849092235,2.51146472241848,2.064507229963,2.01466786693992,0.643105137237198,1.504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| |||
|short_description=p4@Gab2 | |||
}} | |||
Revision as of 11:09, 14 September 2013
| Short description: | p4@Gab2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Gab2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 53bp_to_ENSMUST00000004622, NM_001162477, NM_010248, uc009iix.2, uc009iiy.2_5end |
| EntrezGene: | Gab2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 6.54e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| reproductive organ | 1.01e-09 | 24 |
| reproductive structure | 2.69e-09 | 26 |
| reproductive system | 2.69e-09 | 26 |
| gonad | 4.33e-09 | 18 |
| gonad primordium | 4.33e-09 | 18 |
| external genitalia | 1.52e-08 | 17 |
| indifferent external genitalia | 1.52e-08 | 17 |
| indifferent gonad | 1.52e-08 | 17 |
| testis | 1.68e-08 | 14 |
| male reproductive organ | 3.74e-08 | 15 |
| male organism | 3.02e-07 | 16 |
| male reproductive system | 3.02e-07 | 16 |
| autonomic nervous system | 6.54e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
