FFCP PHASE1:Mm9::chr5:8046162..8046184,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=109552|HGNC=|MCL_coexpression_id=195|UniProt=Q6P069|association_with_transcript=82bp_to_NM_025618,uc008wjh.1_5end|description=CAGE_peak_4_at_Sri_5end|id=chr5:8046162..8046184,+|ontology_enrichment_celltype=CL:0002563!4.23e-09!9;CL:0002251!4.23e-09!9|ontology_enrichment_celltype_v019_2=CL:0002563,4.00e-11,9;CL:0002251,4.00e-11,9;CL:0000239,2.79e-07,6;CL:0000677,2.79e-07,6;CL:0000584,2.79e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.77e-22!59;UBERON:0000160!3.43e-19!43;UBERON:0000344!6.31e-15!15;UBERON:0001242!4.14e-13!13;UBERON:0000060!4.14e-13!13;UBERON:0001262!4.14e-13!13;UBERON:0004786!4.14e-13!13;UBERON:0003350!4.23e-09!9;UBERON:0004808!4.23e-09!9;UBERON:0001277!4.23e-09!9;UBERON:0004923!3.37e-08!24;UBERON:0002113!1.06e-07!14;UBERON:0003918!1.06e-07!14;UBERON:0005095!1.06e-07!14;UBERON:0007687!1.06e-07!14;UBERON:0000485!6.15e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.23e-37,47;UBERON:0000160,4.01e-37,31;UBERON:0000344,1.62e-18,15;UBERON:0001242,3.29e-16,13;UBERON:0001262,3.29e-16,13;UBERON:0004786,3.29e-16,13;UBERON:0003350,4.00e-11,9;UBERON:0004808,4.00e-11,9;UBERON:0001277,4.00e-11,9;UBERON:0004923,8.53e-10,24;UBERON:0001007,1.79e-09,116;UBERON:0001555,1.79e-09,116;UBERON:0007026,1.79e-09,116;UBERON:0004119,4.09e-09,118;UBERON:0000925,4.09e-09,118;UBERON:0006595,4.09e-09,118;UBERON:0000485,1.12e-08,11;UBERON:0004921,2.65e-08,114|phase1_expression=0,14.3079917132138,11.3749809847384,6.0492842261366,12.0214975187123,11.0800319461847,10.0453435456076,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,17.2791816616879,19.7291981717766,21.8208146363708,21.5380998079537,17.8841123129288,41.4251054414895,31.5037662199913,11.7517170647311,0,0,0,26.5743490171173,31.2521133273966,25.7253388890585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94933282276679,0,0,0,0,0,0,0,0,0,0,4.90990682791958,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,44.7340226923493,0,0,26.0566196312763,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.5977920517641,25.1228038330367,1.06644125267617,1.85789337488351,3.22168653305233,14.5212137728807,19.1245117706588,22.0661726290569,18.506633400236,17.6227881554692,18.3474702424197,18.1050389557447,14.8172706210531,23.3693046250098,28.5302225834596,30.4686148079182,0.758671603812327,1.48523066392647,1.1270773567308,5.7022371796688,8.14600446104028,5.11991485199326,10.4340286255025,16.679946721695,15.071877872772,9.87177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0,0.164140899745061,17.1973693611612,0,0,0,0,0,0,0,0,0,0,20.0480829783174,0.316335993581135,1.42323626988794,2.37611749807963,2.09088296014469,5.67742665740062,6.06889558731693,6.11635572367486,10.7319936213452,82.3055080402885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.551530525350042,1.55572709461131,1.64828045791115,0.962757628775446,1.01078884705519,1.52087579934144,1.69763707247469,1.21733959710847,1.21647789569252,1.03383844120104,0.952587382566147,1.15884325944855,1.92909220463705,0.412085900803307,0.883193520806384,0.685738504770831,0.887379030796687,1.66905332963125,0.872078499793971,1.2234219453993,1.18460451048347,1.09756783723664,1.57841826862706,1.22223702461276,2.80571135828869,1.30498519936592,1.37906275325789,0.818462086339379,0.77468420592983,0.771626443924566,0,2.10538447600868,0.644613162144895,0,0.220591419119515,0|short_description=p4@Sri}} | ||
|EntrezGene=109552 | |||
|HGNC= | |||
|MCL_coexpression_id=195 | |||
|UniProt=Q6P069 | |||
|association_with_transcript=82bp_to_NM_025618,uc008wjh.1_5end | |||
|description=CAGE_peak_4_at_Sri_5end | |||
|id=chr5:8046162..8046184,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.23e-09!9;CL:0002251!4.23e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.00e-11,9;CL:0002251,4.00e-11,9;CL:0000239,2.79e-07,6;CL:0000677,2.79e-07,6;CL:0000584,2.79e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.77e-22!59;UBERON:0000160!3.43e-19!43;UBERON:0000344!6.31e-15!15;UBERON:0001242!4.14e-13!13;UBERON:0000060!4.14e-13!13;UBERON:0001262!4.14e-13!13;UBERON:0004786!4.14e-13!13;UBERON:0003350!4.23e-09!9;UBERON:0004808!4.23e-09!9;UBERON:0001277!4.23e-09!9;UBERON:0004923!3.37e-08!24;UBERON:0002113!1.06e-07!14;UBERON:0003918!1.06e-07!14;UBERON:0005095!1.06e-07!14;UBERON:0007687!1.06e-07!14;UBERON:0000485!6.15e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.23e-37,47;UBERON:0000160,4.01e-37,31;UBERON:0000344,1.62e-18,15;UBERON:0001242,3.29e-16,13;UBERON:0001262,3.29e-16,13;UBERON:0004786,3.29e-16,13;UBERON:0003350,4.00e-11,9;UBERON:0004808,4.00e-11,9;UBERON:0001277,4.00e-11,9;UBERON:0004923,8.53e-10,24;UBERON:0001007,1.79e-09,116;UBERON:0001555,1.79e-09,116;UBERON:0007026,1.79e-09,116;UBERON:0004119,4.09e-09,118;UBERON:0000925,4.09e-09,118;UBERON:0006595,4.09e-09,118;UBERON:0000485,1.12e-08,11;UBERON:0004921,2.65e-08,114 | |||
|phase1_expression=0,14.3079917132138,11.3749809847384,6.0492842261366,12.0214975187123,11.0800319461847,10.0453435456076,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,17.2791816616879,19.7291981717766,21.8208146363708,21.5380998079537,17.8841123129288,41.4251054414895,31.5037662199913,11.7517170647311,0,0,0,26.5743490171173,31.2521133273966,25.7253388890585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94933282276679,0,0,0,0,0,0,0,0,0,0,4.90990682791958,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,44.7340226923493,0,0,26.0566196312763,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.5977920517641,25.1228038330367,1.06644125267617,1.85789337488351,3.22168653305233,14.5212137728807,19.1245117706588,22.0661726290569,18.506633400236,17.6227881554692,18.3474702424197,18.1050389557447,14.8172706210531,23.3693046250098,28.5302225834596,30.4686148079182,0.758671603812327,1.48523066392647,1.1270773567308,5.7022371796688,8.14600446104028,5.11991485199326,10.4340286255025,16.679946721695,15.071877872772,9.87177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0,0.164140899745061,17.1973693611612,0,0,0,0,0,0,0,0,0,0,20.0480829783174,0.316335993581135,1.42323626988794,2.37611749807963,2.09088296014469,5.67742665740062,6.06889558731693,6.11635572367486,10.7319936213452,82.3055080402885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.551530525350042,1.55572709461131,1.64828045791115,0.962757628775446,1.01078884705519,1.52087579934144,1.69763707247469,1.21733959710847,1.21647789569252,1.03383844120104,0.952587382566147,1.15884325944855,1.92909220463705,0.412085900803307,0.883193520806384,0.685738504770831,0.887379030796687,1.66905332963125,0.872078499793971,1.2234219453993,1.18460451048347,1.09756783723664,1.57841826862706,1.22223702461276,2.80571135828869,1.30498519936592,1.37906275325789,0.818462086339379,0.77468420592983,0.771626443924566,0,2.10538447600868,0.644613162144895,0,0.220591419119515,0 | |||
|short_description=p4@Sri | |||
}} |
Revision as of 08:04, 14 September 2013
Short description: | p4@Sri |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sri_5end |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | 82bp_to_NM_025618, uc008wjh.1_5end |
EntrezGene: | Sri |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.00e-11 | 9 |
epithelial cell of alimentary canal | 4.00e-11 | 9 |
brush border epithelial cell | 2.79e-07 | 6 |
gut absorptive cell | 2.79e-07 | 6 |
enterocyte | 2.79e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.23e-37 | 47 |
intestine | 4.01e-37 | 31 |
mucosa | 1.62e-18 | 15 |
intestinal mucosa | 3.29e-16 | 13 |
wall of intestine | 3.29e-16 | 13 |
gastrointestinal system mucosa | 3.29e-16 | 13 |
epithelium of mucosa | 4.00e-11 | 9 |
gastrointestinal system epithelium | 4.00e-11 | 9 |
intestinal epithelium | 4.00e-11 | 9 |
organ component layer | 8.53e-10 | 24 |
digestive system | 1.79e-09 | 116 |
digestive tract | 1.79e-09 | 116 |
primitive gut | 1.79e-09 | 116 |
endoderm-derived structure | 4.09e-09 | 118 |
endoderm | 4.09e-09 | 118 |
presumptive endoderm | 4.09e-09 | 118 |
simple columnar epithelium | 1.12e-08 | 11 |
subdivision of digestive tract | 2.65e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.