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FFCP PHASE1:Mm9::chr11:96777762..96777845,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=80280|HGNC=|UniProt=Q99LM2,D6RJ46,A2A6E3,Q3TSS9|association_with_transcript=0bp_to_ENSMUST00000103152,ENSMUST00000134732,NM_030248,uc007lcv.1,uc011ydp.1_5end|description=CAGE_peak_1_at_Cdk5rap3_5end|id=chr11:96777762..96777845,-|ontology_enrichment_celltype=CL:0000063!5.35e-07!66;CL:0000066!6.47e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,6.47e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.60e-11!43;UBERON:0001007!3.00e-11!128;UBERON:0001555!3.00e-11!128;UBERON:0007026!3.00e-11!128;UBERON:0004119!6.53e-11!130;UBERON:0000925!6.53e-11!130;UBERON:0006595!6.53e-11!130;UBERON:0004921!1.87e-10!126;UBERON:0004185!1.87e-10!126;UBERON:0005409!3.38e-10!59;UBERON:0005256!1.15e-08!47;UBERON:0002365!8.71e-08!25;UBERON:0002330!8.71e-08!25;UBERON:0000344!1.06e-07!15;UBERON:0009854!6.13e-07!23;UBERON:0009856!6.13e-07!23;UBERON:0001242!9.53e-07!13;UBERON:0000060!9.53e-07!13;UBERON:0001262!9.53e-07!13;UBERON:0004786!9.53e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.29e-09,45;UBERON:0000160,2.56e-08,31;UBERON:0001007,3.40e-08,116;UBERON:0001555,3.40e-08,116;UBERON:0007026,3.40e-08,116;UBERON:0004119,6.61e-08,118;UBERON:0000925,6.61e-08,118;UBERON:0006595,6.61e-08,118;UBERON:0002365,8.71e-08,25;UBERON:0002330,8.71e-08,25;UBERON:0000344,1.06e-07,15;UBERON:0004921,1.62e-07,114;UBERON:0002100,2.97e-07,90;UBERON:0005409,4.05e-07,47;UBERON:0009854,6.13e-07,23;UBERON:0009856,6.13e-07,23;UBERON:0001242,9.53e-07,13;UBERON:0001262,9.53e-07,13;UBERON:0004786,9.53e-07,13|phase1_expression=10.089377367602,49.2055324771499,36.8549383905524,38.4129548359674,37.0662840160297,27.0285627778143,29.9024179962273,10.4589891987677,4.36445038670167,4.91535505276186,7.19115466547121,5.02564601670619,9.92964233600993,12.0640155338216,13.3243904726265,12.755941845559,22.3859801001007,15.1421839371954,14.671244395814,14.004858509335,19.6450000248971,12.4113689001107,14.6271881917804,36.9582496652769,31.8878900683366,37.3250776674763,34.0301976965669,36.845580789287,45.4155972500734,32.763916868791,33.9247681302616,26.6712882853045,23.9875267157982,31.6963362030877,26.8632006368685,21.7767385419625,22.2544598325982,21.7636447983192,17.1893775795236,24.6056159667685,17.0587131528994,17.0761371239611,16.0218416500281,27.1937126827247,28.9938023287812,17.8040349596831,26.6013057078333,40.7707042431435,59.7546417037763,47.0520355759766,46.335505557995,60.3760770332881,12.9192606664457,9.42970784614748,17.8129713545506,25.7259436035947,31.805211833202,30.4246534443691,1.41621522601718,2.64495489636016,1.90149421051854,28.124096161738,42.6861502133347,22.497492932035,29.6659908770092,19.1829631035447,29.9600110518405,46.4904149439081,6.11768712620018,4.86021377994086,4.6271491497304,3.42781181284564,5.30084498283872,4.16468717330844,4.50473713785711,3.67687514644008,18.7196997698961,14.6840438797966,11.6740965274745,2.2420668914133,2.37867873366265,1.56274011167028,15.355064945076,15.1945904708554,15.1270265299042,4.71405736757868,3.84403538157578,2.05039390407831,14.2365243466386,28.4149066001514,12.1743085254705,30.9752595713299,32.638624017972,66.3834925714515,55.2309954830519,52.8671726774856,25.4204400438471,21.4742206448353,19.2241643406123,20.4936953215997,8.02807492727079,16.6824420638613,20.3844191765317,14.2213340630666,23.8140145112336,26.3494260094103,20.7265022456061,27.8608666514506,13.4647699496529,17.0708459924548,9.36820764537134,16.4411358288556,16.1430848079241,19.2924979907357,11.9940481278419,26.5156507705615,9.14621380617183,15.1829324765907,18.5768215909474,16.6619855445831,17.2256384399107,28.6076399349781,27.9587641827183,6.44117753425404,9.63454851341893,29.377561348988,23.6035795276663,20.3966928537759,24.9057645063207,10.9347166765521,6.8625090422794,1.50785222535437,7.99591872884472,9.97290283588289,8.72709787150152,9.08551073179443,9.47106083807942,22.8908825922571,41.95197789999,13.4682787767343,3.6433724029557,5.74755261083682,4.50155324513373,8.59017461663576,4.35433594568498,6.27757229395764,7.58983968933804,11.3829483125167,2.80238390812695,1.89106080167819,2.99116911078713,7.23345917010997,7.78532297831674,12.8853301613202,16.8741351854514,4.77682240364384,26.6841011179029,28.8229655968481,29.8371674365372,3.72826390563903,4.92504725960302,5.76198596675248,6.39210786080068,9.83821158737019,9.87309522479221,9.06882384526591,10.7309360559848,14.0118410840603,13.000228143165,16.7450813360677,14.3491792896165,14.9123987173839,16.2467085315377,15.4337381574428,9.04246778825747,2.77842453424068,42.9544417878937,31.2051668662982,1.70630600428187,2.55460339046482,9.14958975386863,16.7397325437374,20.4587800337281,21.3052701246066,31.3189180619378,27.8341233483578,27.8982081768299,29.047644918008,33.3388588973695,28.7622210769351,33.2852596807029,30.4686148079182,3.22435431620239,5.59817711787671,2.25415471346161,5.7022371796688,7.5641469995374,5.96154469067708,13.4693824074668,18.5988786454299,23.2358117205235,19.4967518996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|EntrezGene=80280
|HGNC=
|UniProt=Q99LM2,D6RJ46,A2A6E3,Q3TSS9
|association_with_transcript=0bp_to_ENSMUST00000103152,ENSMUST00000134732,NM_030248,uc007lcv.1,uc011ydp.1_5end
|description=CAGE_peak_1_at_Cdk5rap3_5end
|id=chr11:96777762..96777845,-
|ontology_enrichment_celltype=CL:0000063!5.35e-07!66;CL:0000066!6.47e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,6.47e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.60e-11!43;UBERON:0001007!3.00e-11!128;UBERON:0001555!3.00e-11!128;UBERON:0007026!3.00e-11!128;UBERON:0004119!6.53e-11!130;UBERON:0000925!6.53e-11!130;UBERON:0006595!6.53e-11!130;UBERON:0004921!1.87e-10!126;UBERON:0004185!1.87e-10!126;UBERON:0005409!3.38e-10!59;UBERON:0005256!1.15e-08!47;UBERON:0002365!8.71e-08!25;UBERON:0002330!8.71e-08!25;UBERON:0000344!1.06e-07!15;UBERON:0009854!6.13e-07!23;UBERON:0009856!6.13e-07!23;UBERON:0001242!9.53e-07!13;UBERON:0000060!9.53e-07!13;UBERON:0001262!9.53e-07!13;UBERON:0004786!9.53e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.29e-09,45;UBERON:0000160,2.56e-08,31;UBERON:0001007,3.40e-08,116;UBERON:0001555,3.40e-08,116;UBERON:0007026,3.40e-08,116;UBERON:0004119,6.61e-08,118;UBERON:0000925,6.61e-08,118;UBERON:0006595,6.61e-08,118;UBERON:0002365,8.71e-08,25;UBERON:0002330,8.71e-08,25;UBERON:0000344,1.06e-07,15;UBERON:0004921,1.62e-07,114;UBERON:0002100,2.97e-07,90;UBERON:0005409,4.05e-07,47;UBERON:0009854,6.13e-07,23;UBERON:0009856,6.13e-07,23;UBERON:0001242,9.53e-07,13;UBERON:0001262,9.53e-07,13;UBERON:0004786,9.53e-07,13
|phase1_expression=10.089377367602,49.2055324771499,36.8549383905524,38.4129548359674,37.0662840160297,27.0285627778143,29.9024179962273,10.4589891987677,4.36445038670167,4.91535505276186,7.19115466547121,5.02564601670619,9.92964233600993,12.0640155338216,13.3243904726265,12.755941845559,22.3859801001007,15.1421839371954,14.671244395814,14.004858509335,19.6450000248971,12.4113689001107,14.6271881917804,36.9582496652769,31.8878900683366,37.3250776674763,34.0301976965669,36.845580789287,45.4155972500734,32.763916868791,33.9247681302616,26.6712882853045,23.9875267157982,31.6963362030877,26.8632006368685,21.7767385419625,22.2544598325982,21.7636447983192,17.1893775795236,24.6056159667685,17.0587131528994,17.0761371239611,16.0218416500281,27.1937126827247,28.9938023287812,17.8040349596831,26.6013057078333,40.7707042431435,59.7546417037763,47.0520355759766,46.335505557995,60.3760770332881,12.9192606664457,9.42970784614748,17.8129713545506,25.7259436035947,31.805211833202,30.4246534443691,1.41621522601718,2.64495489636016,1.90149421051854,28.124096161738,42.6861502133347,22.497492932035,29.6659908770092,19.1829631035447,29.9600110518405,46.4904149439081,6.11768712620018,4.86021377994086,4.6271491497304,3.42781181284564,5.30084498283872,4.16468717330844,4.50473713785711,3.67687514644008,18.7196997698961,14.6840438797966,11.6740965274745,2.2420668914133,2.37867873366265,1.56274011167028,15.355064945076,15.1945904708554,15.1270265299042,4.71405736757868,3.84403538157578,2.05039390407831,14.2365243466386,28.4149066001514,12.1743085254705,30.9752595713299,32.638624017972,66.3834925714515,55.2309954830519,52.8671726774856,25.4204400438471,21.4742206448353,19.2241643406123,20.4936953215997,8.02807492727079,16.6824420638613,20.3844191765317,14.2213340630666,23.8140145112336,26.3494260094103,20.7265022456061,27.8608666514506,13.4647699496529,17.0708459924548,9.36820764537134,16.4411358288556,16.1430848079241,19.2924979907357,11.9940481278419,26.5156507705615,9.14621380617183,15.1829324765907,18.5768215909474,16.6619855445831,17.2256384399107,28.6076399349781,27.9587641827183,6.44117753425404,9.63454851341893,29.377561348988,23.6035795276663,20.3966928537759,24.9057645063207,10.9347166765521,6.8625090422794,1.50785222535437,7.99591872884472,9.97290283588289,8.72709787150152,9.08551073179443,9.47106083807942,22.8908825922571,41.95197789999,13.4682787767343,3.6433724029557,5.74755261083682,4.50155324513373,8.59017461663576,4.35433594568498,6.27757229395764,7.58983968933804,11.3829483125167,2.80238390812695,1.89106080167819,2.99116911078713,7.23345917010997,7.78532297831674,12.8853301613202,16.8741351854514,4.77682240364384,26.6841011179029,28.8229655968481,29.8371674365372,3.72826390563903,4.92504725960302,5.76198596675248,6.39210786080068,9.83821158737019,9.87309522479221,9.06882384526591,10.7309360559848,14.0118410840603,13.000228143165,16.7450813360677,14.3491792896165,14.9123987173839,16.2467085315377,15.4337381574428,9.04246778825747,2.77842453424068,42.9544417878937,31.2051668662982,1.70630600428187,2.55460339046482,9.14958975386863,16.7397325437374,20.4587800337281,21.3052701246066,31.3189180619378,27.8341233483578,27.8982081768299,29.047644918008,33.3388588973695,28.7622210769351,33.2852596807029,30.4686148079182,3.22435431620239,5.59817711787671,2.25415471346161,5.7022371796688,7.5641469995374,5.96154469067708,13.4693824074668,18.5988786454299,23.2358117205235,19.4967518996445,29.6452627087149,14.0149888801519,13.562570662811,15.5154857545549,16.4316698324687,20.0177042594506,20.1154422907322,20.4264257590076,15.0785760900783,36.2421065408268,34.5043695665651,33.8648262378338,33.0759933501434,53.2941432468406,55.7925956053147,29.9114983245288,18.1058126363273,5.49525094134406,7.82231886921724,6.62005834523234,6.10194645550105,11.8929442783689,12.6163129669587,9.36641509717434,12.6108115284953,11.0732344824387,15.9454768657487,24.2517705779292,21.9309926969687,17.2132379711999,18.0949540727127,14.6854534631052,26.0635064700089,29.5252318546064,14.2890025089135,12.4244387787735,18.3607138821876,22.2174415939848,6.62567260774139,7.41833614163613,6.67812532971677,10.7535959078648,11.1399337041197,16.1353622549635,8.09621403349789,9.9366991689846,7.11518000303742,6.74774764485795,18.1683309066584,12.9987890677096,7.4928001302645,15.5071915594183,39.8235415019888,6.31229654002952,16.9301191900261,28.1021568836288,36.6174347172158,32.5881256820563,22.7416897988035,27.2650297108129,24.9548164869305,47.4055136903724,56.9260486304993,28.8779521094923,55.8320953436212,3.96134406868882,4.91562998374467,6.00143698088458,9.04435191575595,10.7021290561242,13.1639216481697,18.5723618959906,12.9069439435041,10.3797714723272,67.7022182028733,14.3451040059088,11.4639742954093,12.6054013099846,14.3246812803764,13.9519764783302,27.399198643206,11.4963687246516,12.3027034174454,10.5257302661243,12.9636169158798,16.5764242164128,12.9859516334974,16.2432502976631,17.5077782893671,16.2343684695443,15.8929969875087,25.7761066864081,3.63786392618306,9.14937602070819,11.2325554454673,15.6816222010852,22.9280691933486,20.6342449968776,23.8041952488967,27.2226179663391,33.3110481359908,50.328484360041,64.2609950099977,4.33597983527538,7.2801735801123,7.19469396872976,6.45799117388655,6.08242051766801,5.28107573905893,10.1559420178281,10.8005124758482,28.9900944991207,35.1396607634596,9.79634473947353,10.1362607645082,14.6876668745703,15.0708154654242,9.667441566044,11.3248372225321,11.7791540529569,9.59981926634752,13.4285378431036,11.27860738494,10.7884018096419,9.16104078953673,13.0848104630848,12.739582337791,16.5513180039104,4.43971906748129,2.33256027184637,2.85403847818933,20.6712865614444,23.6479919068489,18.8646172995283,19.9362592543531,39.1226241147583,3.95326289831947,4.14292712856459,4.01026859407578,3.78077001156113,9.59115527678899,8.3093328712867,7.42524750254986,8.10578165803597,2.71885445390523,3.10656187051092,3.1136204275253,3.99024873401031,6.4878770186571,6.56388136084394,11.1094976192831,10.1113929647508,13.5570503958985,11.5379632053781,14.4413644316317,12.6348605881899,9.63221339582911,11.6948331659367,13.2970940607233,12.8050304809739,11.9465775427676,13.3362233559261,9.96605203125757,12.9249177710682,8.24171801606613,11.1871179302142,15.4291163573437,14.9079677173843,14.0677352068919,12.9358310802772,11.1990162694243,13.1152642232099,12.6220301282213,12.6273461490165,11.9507620184358,8.41713407486608,11.0330566855482,10.7369885789364,15.9600106836179,10.5357052006457,11.5743966588685,11.4912865851455,14.2698281151699,12.8922632428979,10.9034349279241,19.8532277207564,19.4768981921154
|short_description=p1@Cdk5rap3
}}

Revision as of 21:41, 12 September 2013

Short description:p1@Cdk5rap3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cdk5rap3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000103152, ENSMUST00000134732, NM_030248, uc007lcv.1, uc011ydp.1_5end
EntrezGene:Cdk5rap3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cdk5rap3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I549.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I636.85
CD326+ enterocyte, pool1.CNhs13542.11848-124I338.41
CD326+ enterocyte, pool2.CNhs13197.11849-124I437.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I727.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I829.90
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.93
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.76
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A522.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.14
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A414.67
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.63
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D231.89
GP2+ M cell, pool1.CNhs13228.11845-124H937.33
GP2+ M cell, pool2.CNhs13231.11846-124I134.03
GP2+ M cell, pool3.CNhs13240.11847-124I236.85
Ileum epithelium, pool1.CNhs13199.10252-104B945.42
Ileum epithelium, pool2.CNhs13232.10253-104C132.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C833.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I326.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G623.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F526.86
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F621.78
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F722.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.99
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.80
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B726.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C240.77
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B859.75
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C347.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C446.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C460.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.92
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.81
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E131.81
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C530.42
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C628.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D142.69
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E729.67
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.18
Mouse Microglia, donor1.CNhs12629.11718-123C829.96
Mouse Microglia, donor2.CNhs12634.11736-123E846.49
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D914.24
Mouse Schwann, donor2.CNhs12573.11746-123F928.41
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.98
Mouse hepatocyte, donor1.CNhs13078.11714-123C432.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C866.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F455.23
Mouse hepatocyte, donor8.CNhs13091.11824-124F652.87
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I721.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E319.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I820.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G226.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.73
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.86
accessory axillary lymph node, adult.CNhs10475.1063-29H913.46
adrenal gland, adult.CNhs10508.49-24D717.07
adrenal gland, embryo E14.CNhs11038.406-44C59.37
adrenal gland, embryo E16.CNhs11004.1254-43D616.44
adrenal gland, embryo E17.CNhs11043.1263-45I116.14
adrenal gland, embryo E18.CNhs11026.1262-18F519.29
adrenal gland, neonate N00.CNhs11191.1311-23C111.99
adrenal gland, neonate N25.CNhs11223.1377-27I326.52
amnion, adult pregnant day17.5.CNhs10488.583-22A89.15
aorta, adult.CNhs10498.46-23H115.18
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F516.66
bone (os femoris), neonate N16.CNhs11225.1525-43A617.23
bone (os femoris), neonate N20.CNhs11195.1350-25C328.61
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H729.38
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D120.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D424.91
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D58.00
cortex, neonate N30.CNhs11107.1392-42F29.97
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B29.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.89
epididymis, adult.CNhs10490.58-23B241.95
eyeball, adult.CNhs10484.31-12G413.47
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D48.59
eyeball, neonate N00.CNhs11207.633-15C64.35
eyeball, neonate N01.CNhs11140.1532-43E76.28
eyeball, neonate N02.CNhs11205.1551-44G87.59
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A87.23
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C412.89
forelimb, embryo E18.CNhs11008.1520-43B516.87
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D228.82
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D529.84
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C69.87
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G310.73
heart, neonate N00.CNhs11213.639-21E314.01
heart, neonate N03.CNhs11221.1349-25I213.00
heart, neonate N10.CNhs11118.749-24G116.75
heart, neonate N16.CNhs11209.782-15G114.35
heart, neonate N20.CNhs11127.821-26I614.91
heart, neonate N25.CNhs11196.1351-25D316.25
heart, neonate N30.CNhs11202.1390-42D215.43
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I342.95
intestine, adult.CNhs10496.178-9A331.21
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D89.15
intestine, embryo E16.CNhs10585.463-22H416.74
intestine, embryo E17.CNhs10582.482-18D320.46
intestine, embryo E18.CNhs10526.1289-20F721.31
intestine, neonate N00.CNhs11126.644-26D131.32
intestine, neonate N01.CNhs11192.1322-23E927.83
intestine, neonate N06.CNhs11102.688-20B827.90
intestine, neonate N07.CNhs11095.720-20F229.05
intestine, neonate N10.CNhs11098.755-23A533.34
intestine, neonate N20.CNhs11187.827-18D128.76
intestine, neonate N25.CNhs11121.1352-25E333.29
intestine, neonate N30.CNhs11131.1384-42G130.47
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F85.60
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C77.56
kidney, neonate N00.CNhs11214.646-21G75.96
kidney, neonate N10.CNhs11206.758-6D513.47
kidney, neonate N20.CNhs11113.832-19I118.60
kidney, neonate N25.CNhs11122.1353-25F323.24
kidney, neonate N30.CNhs11203.1385-42H119.50
liver, adult pregnant day01.CNhs10466.508-5B229.65
liver, embryo E12.CNhs10601.355-15F814.01
liver, embryo E13.CNhs10524.378-3H613.56
liver, embryo E14.CNhs10594.409-16E115.52
liver, embryo E15.CNhs10520.433-16D716.43
liver, embryo E16.CNhs10523.462-17F520.02
liver, embryo E17.CNhs10510.481-18A320.12
liver, embryo E18.CNhs10579.499-43G420.43
liver, neonate N00.CNhs11117.641-24F415.08
liver, neonate N03.CNhs11123.1345-25G236.24
liver, neonate N06.CNhs11101.684-20A834.50
liver, neonate N07.CNhs11103.716-20H233.86
liver, neonate N10.CNhs11115.751-24B933.08
liver, neonate N20.CNhs11220.823-25A353.29
liver, neonate N25.CNhs11198.1368-26H155.79
liver, neonate N30.CNhs11106.1382-42D129.91
lung, adult.CNhs10474.28-22B118.11
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F87.82
lung, embryo E15.CNhs11020.432-17C56.62
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A611.89
lung, embryo E18.CNhs10583.1287-20I612.62
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E512.61
lung, neonate N07.CNhs11111.715-19A311.07
lung, neonate N10.CNhs11219.750-23E615.95
lung, neonate N20.CNhs11109.822-18A424.25
lung, neonate N25.CNhs11119.1359-25C721.93
lung, neonate N30.CNhs11133.1394-42H217.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.69
mammary gland, adult lactating day02.CNhs10480.595-22B626.06
mammary gland, adult pregnant day19.CNhs10476.588-5H229.53
medulla oblongata, adult.CNhs10477.17-12C214.29
medulla oblongata, neonate N30.CNhs11200.1396-42A312.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.36
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.22
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.14
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I718.17
ovary, embryo E18.CNhs11040.505-44H713.00
ovary, neonate N00.CNhs11217.1299-22I47.49
oviduct, adult pregnant day01.CNhs10500.988-6G615.51
pancreas, adult.CNhs10486.34-16E439.82
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F216.93
pancreas, embryo E16.CNhs11003.460-26E528.10
pancreas, embryo E17.CNhs10599.1558-45G336.62
pancreas, embryo E18.CNhs10580.1535-43I732.59
pancreas, neonate N00.CNhs11105.645-26G922.74
pancreas, neonate N01.CNhs11138.1531-43D727.27
pancreas, neonate N02.CNhs11139.1539-43D824.95
pancreas, neonate N16.CNhs11136.787-43B647.41
pancreas, neonate N25.CNhs11094.1555-45E256.93
pancreas, neonate N30.CNhs11182.1548-44H528.88
pituitary gland, adult.CNhs10493.21-1G855.83
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C74.92
pituitary gland, embryo E14.CNhs11037.398-44A56.00
pituitary gland, embryo E15.CNhs10592.427-16B99.04
pituitary gland, embryo E16.CNhs11036.449-43F610.70
pituitary gland, embryo E17.CNhs11039.1265-44F513.16
pituitary gland, neonate N00.CNhs11190.1308-22E918.57
placenta, adult pregnant day10.CNhs10472.539-13I712.91
placenta, adult pregnant day17.CNhs10464.577-18G310.38
prostate, adult.CNhs10470.859-1F867.70
skin, adult.CNhs10492.30-1C314.35
skin, neonate N00.CNhs11124.650-25G411.46
skin, neonate N03.CNhs11215.662-22H312.61
skin, neonate N06.CNhs11097.693-20I514.32
skin, neonate N10.CNhs11108.762-6C413.95
small intestine, neonate N16.CNhs11114.790-21I127.40
spinal cord, adult.CNhs10505.24-13C911.50
spleen, adult.CNhs10465.25-2G212.30
spleen, embryo E16.CNhs11035.461-43C110.53
spleen, embryo E18.CNhs11011.1271-21F212.96
spleen, neonate N10.CNhs11116.752-24D116.58
spleen, neonate N20.CNhs11112.824-19H112.99
spleen, neonate N25.CNhs11099.1354-25G316.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.89
stomach, adult.CNhs10503.33-1H625.78
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G89.15
stomach, embryo E16.CNhs11022.459-17D411.23
stomach, embryo E17.CNhs11006.1035-18D515.68
stomach, embryo E18.CNhs10999.1286-20C622.93
stomach, neonate N03.CNhs11193.1340-24B820.63
stomach, neonate N07.CNhs11210.718-18A923.80
stomach, neonate N25.CNhs11104.1355-25E427.22
stomach, neonate N30.CNhs11134.1386-42I133.31
submandibular gland, adult.CNhs10469.59-29C150.33
testis, adult.CNhs10504.57-7G564.26
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C57.28
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I56.46
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B75.28
testis, neonate N07.CNhs11222.726-26I410.16
testis, neonate N10.CNhs11204.763-44D910.80
testis, neonate N20.CNhs11110.839-18H328.99
testis, neonate N30.CNhs11130.1391-42E235.14
thymus, adult.CNhs10471.38-12B59.80
thymus, embryo E14.CNhs11041.402-44I410.14
thymus, embryo E15.CNhs11005.430-45I214.69
thymus, embryo E16.CNhs11002.456-26C515.07
thymus, embryo E17.CNhs10581.478-18C19.67
thymus, embryo E18.CNhs10595.1273-19G411.32
thymus, neonate N02.CNhs11181.1541-43F811.78
thymus, neonate N03.CNhs11137.2104-43C79.60
thymus, neonate N06.CNhs11197.681-26C413.43
thymus, neonate N07.CNhs11211.713-19D311.28
thymus, neonate N10.CNhs11194.748-24E410.79
thymus, neonate N20.CNhs11186.820-7A29.16
thymus, neonate N25.CNhs11125.1362-25G713.08
thymus, neonate N30.CNhs11132.1393-42G212.74
tongue, adult.CNhs10499.32-1B416.55
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.33
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E420.67
uterus, adult pregnant day19.CNhs10497.590-15F523.65
uterus, adult.CNhs10509.92-27E518.86
vagina, adult.CNhs10502.89-27D519.94
vesicular gland, adult.CNhs10491.51-27F839.12
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F210.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.62
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.54
whole body, embryo E17.5.CNhs10513.490-9F911.57
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B314.27
whole body, neonate N00.CNhs10525.657-19C212.89
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D119.85
whole body, neonate N10.CNhs10518.761-6B419.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell6.47e-0725

Uber anatomy
Ontology termp-valuen
trunk mesenchyme1.29e-0945
intestine2.56e-0831
digestive system3.40e-08116
digestive tract3.40e-08116
primitive gut3.40e-08116
endoderm-derived structure6.61e-08118
endoderm6.61e-08118
presumptive endoderm6.61e-08118
exocrine gland8.71e-0825
exocrine system8.71e-0825
mucosa1.06e-0715
subdivision of digestive tract1.62e-07114
trunk2.97e-0790
gastrointestinal system4.05e-0747
digestive tract diverticulum6.13e-0723
sac6.13e-0723
intestinal mucosa9.53e-0713
wall of intestine9.53e-0713
gastrointestinal system mucosa9.53e-0713







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