FFCP PHASE1:Hg19::chr1:26686541..26686559,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C159|description=CAGE_peak_at_chr1:26686541..26686559,-|id=chr1:26686541..26686559,-|ontology_enrichment_celltype=CL:0000039!5.99e-14!7;CL:0000586!5.99e-14!7;CL:0002541!2.66e-12!3;CL:0002322!3.92e-12!5;CL:0000623!3.10e-11!3;CL:0000825!3.10e-11!3|ontology_enrichment_celltype_v019=CL:0000039;5.92e-29;7!CL:0000586;5.92e-29;7!CL:0002541;1.40e-08;3!CL:0000083;8.61e-07;4|ontology_enrichment_celltype_v019_2=CL:0000039,5.64e-29,7;CL:0000586,5.64e-29,7;CL:0002541,1.51e-08,3;CL:0000083,8.61e-07,4|ontology_enrichment_development_v019=UBERON:0003124;1.34e-23;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;3.28e-23;1!DOID:10165;3.28e-23;1!DOID:1798;3.28e-23;1!DOID:3095;1.04e-09;22!DOID:2994;1.04e-09;22!DOID:1793;8.61e-07;4|ontology_enrichment_disease_v019_2=DOID:1799,3.28e-23,1;DOID:10165,3.28e-23,1;DOID:1798,3.28e-23,1;DOID:3095,1.03e-09,22;DOID:2994,1.03e-09,22;DOID:1793,8.61e-07,4|ontology_enrichment_uberon=UBERON:0000476!2.66e-12!3;UBERON:0000920!2.66e-12!3;UBERON:0003124!3.62e-09!7|ontology_enrichment_uberon_v019=UBERON:0003124;1.40e-08;3!UBERON:0000920;1.40e-08;3!UBERON:0001987;6.87e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.49e-13,7;UBERON:0000920,1.51e-08,3;UBERON:0005631,3.04e-07,14;UBERON:0000158,3.04e-07,14;UBERON:0001987,6.87e-07,4;UBERON:0004340,6.87e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.348581828608555,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8074955607948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,12.7094131048652,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.3380062960897,12.3865549285486,1.52106320690811,0.31900115973192,0.732780747214898,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0.550157746388935,0.83088067605837,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.90482761236836,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,49.9394344015657,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:26686541..26686559,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_at_chr1:26686541..26686559,- | |||
|id=chr1:26686541..26686559,- | |||
|ontology_enrichment_celltype=CL:0000039!5.99e-14!7;CL:0000586!5.99e-14!7;CL:0002541!2.66e-12!3;CL:0002322!3.92e-12!5;CL:0000623!3.10e-11!3;CL:0000825!3.10e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.92e-29;7!CL:0000586;5.92e-29;7!CL:0002541;1.40e-08;3!CL:0000083;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.64e-29,7;CL:0000586,5.64e-29,7;CL:0002541,1.51e-08,3;CL:0000083,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.34e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.28e-23;1!DOID:10165;3.28e-23;1!DOID:1798;3.28e-23;1!DOID:3095;1.04e-09;22!DOID:2994;1.04e-09;22!DOID:1793;8.61e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.28e-23,1;DOID:10165,3.28e-23,1;DOID:1798,3.28e-23,1;DOID:3095,1.03e-09,22;DOID:2994,1.03e-09,22;DOID:1793,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.66e-12!3;UBERON:0000920!2.66e-12!3;UBERON:0003124!3.62e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.40e-08;3!UBERON:0000920;1.40e-08;3!UBERON:0001987;6.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.49e-13,7;UBERON:0000920,1.51e-08,3;UBERON:0005631,3.04e-07,14;UBERON:0000158,3.04e-07,14;UBERON:0001987,6.87e-07,4;UBERON:0004340,6.87e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.348581828608555,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8074955607948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,12.7094131048652,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.3380062960897,12.3865549285486,1.52106320690811,0.31900115973192,0.732780747214898,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0.550157746388935,0.83088067605837,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.90482761236836,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,49.9394344015657,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:26686541..26686559,- | |||
}} |
Revision as of 04:59, 12 September 2013
Short description: | p@chr1:26686541..26686559, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:26686541..26686559, - |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.64e-29 | 7 |
germ cell | 5.64e-29 | 7 |
chorionic membrane mesenchymal stem cell | 1.51e-08 | 3 |
epithelial cell of pancreas | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.49e-13 | 7 |
egg chorion | 1.51e-08 | 3 |
extraembryonic membrane | 3.04e-07 | 14 |
membranous layer | 3.04e-07 | 14 |
placenta | 6.87e-07 | 4 |
allantois | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.28e-23 | 1 |
endocrine pancreas cancer | 3.28e-23 | 1 |
pancreatic endocrine carcinoma | 3.28e-23 | 1 |
germ cell and embryonal cancer | 1.03e-09 | 22 |
germ cell cancer | 1.03e-09 | 22 |
pancreatic cancer | 8.61e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.